RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 PSKH2Q96QS6 385 aa8.47□□□□□ -1.05
APOBEC3F-204ENST00000491387 SLC12A9Q9BXP2 914 aa8.47□□□□□ -1.05
APOBEC3F-204ENST00000491387 TEX101Q9BY14 249 aa8.47□□□□□ -1.05
APOBEC3F-204ENST00000491387 TMEM168Q9H0V1 697 aa8.47□□□□□ -1.05
APOBEC3F-204ENST00000491387 CDH19Q9H159 772 aa8.47□□□□□ -1.05
APOBEC3F-204ENST00000491387 SEMA6CQ9H3T2 930 aa8.47□□□□□ -1.05
APOBEC3F-204ENST00000491387 RTN4Q9NQC3 1192 aaKnown RBP8.47□□□□□ -1.05
APOBEC3F-204ENST00000491387 TRNAU1APQ9NX07 287 aaKnown RBP8.47□□□□□ -1.05
APOBEC3F-204ENST00000491387 TUBD1Q9UJT1 453 aa8.47□□□□□ -1.05
APOBEC3F-204ENST00000491387 PCDHB11Q9Y5F2 797 aa8.47□□□□□ -1.05
APOBEC3F-204ENST00000491387 SPTAN1Q13813 2472 aaKnown RBP8.47□□□□□ -1.05
APOBEC3F-204ENST00000491387 USP9XQ93008 2570 aaPredicted RBP8.47□□□□□ -1.05
APOBEC3F-204ENST00000491387 A0A1W2PQ67 120 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 SYCE3A1L190 88 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 PRSS38A1L453 326 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 ANKRD62A6NC57 917 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 ARHGAP42A6NI28 874 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 LRRC10BA6NIK2 292 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 STMND1H3BQB6 276 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 PYCARD-AS1I3L0S3 204 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 ZW10O43264 779 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 HTRA2O43464 458 aaPredicted RBP8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 CREB3O43889 395 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 PPFIA2O75334 1257 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 MBD3O95983 291 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 FGF1P05230 155 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 CEACAM5P06731 702 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 ELFN1P0C7U0 828 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 FAM87AP0C7U9 286 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 MYCLP1P12525 358 aaPredicted RBP8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 CCNB1P14635 433 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 WT1P19544 449 aaPredicted RBP8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 CDK11BP21127 795 aaKnown RBP8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 HCAR3P49019 387 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 PAPOLAP51003 745 aaKnown RBP8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 RENBPP51606 427 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 ZNF135P52742 658 aaPredicted RBP8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 TPI1P60174 286 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 IL10RBQ08334 325 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 ARHGEF7Q14155 803 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 FAM182AQ5T1J6 154 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 CFAP58Q5T655 872 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 TMCO4Q5TGY1 634 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 ZNF574Q6ZN55 896 aaPredicted RBP8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 CYP4V2Q6ZWL3 525 aaPredicted RBP8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 ZNF571Q7Z3V5 609 aaPredicted RBP8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 LUZP1Q86V48 1076 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 PSTKQ8IV42 348 aaKnown RBP8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 SFTPA2Q8IWL1 248 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 ARHGAP12Q8IWW6 846 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 Q8N9G6 341 aaPredicted RBP8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 TSEN2Q8NCE0 465 aaKnown RBP8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 CCL4L1Q8NHW4 92 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 HTR3CQ8WXA8 447 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 SCARF2Q96GP6 870 aaPredicted RBP8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 TAAR9Q96RI9 348 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 DPYSL5Q9BPU6 564 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 ARHGAP9Q9BRR9 750 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 LGR4Q9BXB1 951 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 FRMD8Q9BZ67 464 aaPredicted RBP8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 SLC39A8Q9C0K1 460 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 SLC25A18Q9H1K4 315 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 DPEP2Q9H4A9 486 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 WDR26Q9H7D7 661 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 SPATS2LQ9NUQ6 558 aaKnown RBP8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 AKAP7Q9P0M2 348 aaPredicted RBP8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 PDP2Q9P2J9 529 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 SLC17A4Q9Y2C5 497 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 RP1L1Q8IWN7 2480 aaPredicted RBP8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 COL12A1Q99715 3063 aa8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 SPTBN1Q01082 2364 aaKnown RBP8.46□□□□□ -1.06
APOBEC3F-204ENST00000491387 IGHV5-10-1A0A0J9YXX1 117 aa8.45□□□□□ -1.06
APOBEC3F-204ENST00000491387 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.45□□□□□ -1.06
APOBEC3F-204ENST00000491387 B4DGG1 531 aa8.45□□□□□ -1.06
APOBEC3F-204ENST00000491387 B4E171 279 aa8.45□□□□□ -1.06
APOBEC3F-204ENST00000491387 PSMD11O00231 422 aa8.45□□□□□ -1.06
APOBEC3F-204ENST00000491387 DDX3XO00571 662 aaKnown RBP eCLIP8.45□□□□□ -1.06
APOBEC3F-204ENST00000491387 CAPN5O15484 640 aaPredicted RBP8.45□□□□□ -1.06
APOBEC3F-204ENST00000491387 SOCS5O75159 536 aa8.45□□□□□ -1.06
APOBEC3F-204ENST00000491387 PALMO75781 387 aa8.45□□□□□ -1.06
APOBEC3F-204ENST00000491387 FUCA1P04066 466 aa8.45□□□□□ -1.06
APOBEC3F-204ENST00000491387 PRKCGP05129 697 aa8.45□□□□□ -1.06
APOBEC3F-204ENST00000491387 IVLP07476 585 aa8.45□□□□□ -1.06
APOBEC3F-204ENST00000491387 CCL4P13236 92 aa8.45□□□□□ -1.06
APOBEC3F-204ENST00000491387 KRT10P13645 584 aa8.45□□□□□ -1.06
APOBEC3F-204ENST00000491387 CR2P20023 1033 aa8.45□□□□□ -1.06
APOBEC3F-204ENST00000491387 CD1CP29017 333 aa8.45□□□□□ -1.06
APOBEC3F-204ENST00000491387 HSPA9P38646 679 aaKnown RBP8.45□□□□□ -1.06
APOBEC3F-204ENST00000491387 TSPAN7P41732 249 aa8.45□□□□□ -1.06
APOBEC3F-204ENST00000491387 ARSDP51689 593 aa8.45□□□□□ -1.06
APOBEC3F-204ENST00000491387 LIMK2P53671 638 aa8.45□□□□□ -1.06
APOBEC3F-204ENST00000491387 DPTQ07507 201 aa8.45□□□□□ -1.06
APOBEC3F-204ENST00000491387 BCL2L1Q07817 233 aa8.45□□□□□ -1.06
APOBEC3F-204ENST00000491387 ILF3Q12906 894 aaKnown RBP eCLIP8.45□□□□□ -1.06
APOBEC3F-204ENST00000491387 PEX6Q13608 980 aa8.45□□□□□ -1.06
APOBEC3F-204ENST00000491387 RALGPS1Q5JS13 557 aa8.45□□□□□ -1.06
APOBEC3F-204ENST00000491387 PPP1R2P3Q6NXS1 205 aa8.45□□□□□ -1.06
APOBEC3F-204ENST00000491387 DNAJC24Q6P3W2 148 aa8.45□□□□□ -1.06
APOBEC3F-204ENST00000491387 SCYL2Q6P3W7 929 aa8.45□□□□□ -1.06
APOBEC3F-204ENST00000491387 ARHGAP36Q6ZRI8 547 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms