RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 TCEAL2Q9H3H9 227 aaPredicted RBP16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 CYP4F12Q9HCS2 524 aa16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 DDX56Q9NY93 547 aaKnown RBP16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 AKAP7Q9P0M2 348 aaPredicted RBP16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 SIRPGQ9P1W8 387 aa16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 RPL26L1Q9UNX3 145 aaKnown RBP16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 USP24Q9UPU5 2620 aa16.58■□□□□ 0.24
PDLIM2-217ENST00000491330 KMT2BQ9UMN6 2715 aaPredicted RBP16.57■□□□□ 0.24
PDLIM2-217ENST00000491330 ZNF487B1APH4 448 aa16.57■□□□□ 0.24
PDLIM2-217ENST00000491330 MYF5P13349 255 aa16.57■□□□□ 0.24
PDLIM2-217ENST00000491330 KDELR1P24390 212 aa16.57■□□□□ 0.24
PDLIM2-217ENST00000491330 TEAD1P28347 426 aa16.57■□□□□ 0.24
PDLIM2-217ENST00000491330 EIF2S3P41091 472 aaKnown RBP16.57■□□□□ 0.24
PDLIM2-217ENST00000491330 MLLT3P42568 568 aaPredicted RBP16.57■□□□□ 0.24
PDLIM2-217ENST00000491330 GPR1P46091 355 aa16.57■□□□□ 0.24
PDLIM2-217ENST00000491330 UCNP55089 124 aa16.57■□□□□ 0.24
PDLIM2-217ENST00000491330 RALGDSQ12967 914 aa16.57■□□□□ 0.24
PDLIM2-217ENST00000491330 EIF3IQ13347 325 aaKnown RBP16.57■□□□□ 0.24
PDLIM2-217ENST00000491330 TP53INP2Q8IXH6 220 aa16.57■□□□□ 0.24
PDLIM2-217ENST00000491330 CCDC13Q8IYE1 715 aa16.57■□□□□ 0.24
PDLIM2-217ENST00000491330 WDR36Q8NI36 951 aaKnown RBP16.57■□□□□ 0.24
PDLIM2-217ENST00000491330 SNIP1Q8TAD8 396 aaKnown RBP16.57■□□□□ 0.24
PDLIM2-217ENST00000491330 SLC35G2Q8TBE7 412 aa16.57■□□□□ 0.24
PDLIM2-217ENST00000491330 FUBP1Q96AE4 644 aaKnown RBP16.57■□□□□ 0.24
PDLIM2-217ENST00000491330 COQ10AQ96MF6 247 aa16.57■□□□□ 0.24
PDLIM2-217ENST00000491330 TMEM74Q96NL1 305 aa16.57■□□□□ 0.24
PDLIM2-217ENST00000491330 CLPBQ9H078 707 aa16.57■□□□□ 0.24
PDLIM2-217ENST00000491330 BRD8Q9H0E9 1235 aa16.57■□□□□ 0.24
PDLIM2-217ENST00000491330 CARS2Q9HA77 564 aaKnown RBP16.57■□□□□ 0.24
PDLIM2-217ENST00000491330 IGF2RP11717 2491 aa16.57■□□□□ 0.24
PDLIM2-217ENST00000491330 APOL1O14791 398 aa16.56■□□□□ 0.24
PDLIM2-217ENST00000491330 PPP1R12AO14974 1030 aaPredicted RBP16.56■□□□□ 0.24
PDLIM2-217ENST00000491330 IPO7O95373 1038 aaKnown RBP16.56■□□□□ 0.24
PDLIM2-217ENST00000491330 PEX11BO96011 259 aa16.56■□□□□ 0.24
PDLIM2-217ENST00000491330 MPOP05164 745 aa16.56■□□□□ 0.24
PDLIM2-217ENST00000491330 GLB1P16278 677 aa16.56■□□□□ 0.24
PDLIM2-217ENST00000491330 TGM2P21980 687 aa16.56■□□□□ 0.24
PDLIM2-217ENST00000491330 IL4RP24394 825 aa16.56■□□□□ 0.24
PDLIM2-217ENST00000491330 TRAF2Q12933 501 aa16.56■□□□□ 0.24
PDLIM2-217ENST00000491330 PDK1Q15118 436 aa16.56■□□□□ 0.24
PDLIM2-217ENST00000491330 CNGA3Q16281 694 aa16.56■□□□□ 0.24
PDLIM2-217ENST00000491330 LRRC38Q5VT99 294 aa16.56■□□□□ 0.24
PDLIM2-217ENST00000491330 NCBP2-AS2Q69YL0 99 aa16.56■□□□□ 0.24
PDLIM2-217ENST00000491330 RHOT1Q8IXI2 618 aa16.56■□□□□ 0.24
PDLIM2-217ENST00000491330 PLA2G15Q8NCC3 412 aa16.56■□□□□ 0.24
PDLIM2-217ENST00000491330 DTD2Q96FN9 168 aa16.56■□□□□ 0.24
PDLIM2-217ENST00000491330 PANX2Q96RD6 677 aa16.56■□□□□ 0.24
PDLIM2-217ENST00000491330 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.56■□□□□ 0.24
PDLIM2-217ENST00000491330 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.56■□□□□ 0.24
PDLIM2-217ENST00000491330 LY6G6EA0A0G2JKS1 128 aa16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 PRSS38A1L453 326 aa16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 TTC24A2A3L6 582 aaPredicted RBP16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 TMEM202A6NGA9 273 aa16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 SPOPO43791 374 aa16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 MFSD11O43934 449 aa16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 CD48P09326 243 aa16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 PNLIPP16233 465 aa16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 CYLC1P35663 651 aaPredicted RBP16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 ETV3P41162 512 aa16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 NOP2P46087 812 aaKnown RBP16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 TFDP2Q14188 446 aa16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 SPA17Q15506 151 aa16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 ATP13A4Q4VNC1 1196 aa16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 C3orf38Q5JPI3 329 aa16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 FOXR1Q6PIV2 292 aa16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 CRTC1Q6UUV9 634 aa16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 HEATR4Q86WZ0 1026 aa16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 NRSN1Q8IZ57 195 aa16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 PGBD5Q8N414 524 aa16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 OR1E3Q8WZA6 343 aa16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 MAML1Q92585 1016 aa16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 AP2M1Q96CW1 435 aa16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 HDAC11Q96DB2 347 aa16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 RNF157Q96PX1 679 aa16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 MCCC1Q96RQ3 725 aaPredicted RBP16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 SRPK1Q96SB4 655 aaKnown RBP16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 CHP1Q99653 195 aa16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 FERMT1Q9BQL6 677 aa16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 CDH19Q9H159 772 aa16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 TRNAU1APQ9NX07 287 aaKnown RBP16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 PPIL1Q9Y3C6 166 aa16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 PCDHB1Q9Y5F3 818 aa16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 HEY1Q9Y5J3 304 aa16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 U3KQA8 63 aa16.55■□□□□ 0.24
PDLIM2-217ENST00000491330 CCDC187A0A096LP49 1063 aa16.54■□□□□ 0.24
PDLIM2-217ENST00000491330 RHPN2P1A8MT19 583 aa16.54■□□□□ 0.24
PDLIM2-217ENST00000491330 DXOO77932 396 aaKnown RBP16.54■□□□□ 0.24
PDLIM2-217ENST00000491330 LCA5LO95447 670 aa16.54■□□□□ 0.24
PDLIM2-217ENST00000491330 KRT1P04264 644 aa16.54■□□□□ 0.24
PDLIM2-217ENST00000491330 CTPS1P17812 591 aa16.54■□□□□ 0.24
PDLIM2-217ENST00000491330 ARSEP51690 589 aa16.54■□□□□ 0.24
PDLIM2-217ENST00000491330 HADHBP55084 474 aaKnown RBP16.54■□□□□ 0.24
PDLIM2-217ENST00000491330 DPTQ07507 201 aa16.54■□□□□ 0.24
PDLIM2-217ENST00000491330 AP1B1Q10567 949 aa16.54■□□□□ 0.24
PDLIM2-217ENST00000491330 TCEA2Q15560 299 aa16.54■□□□□ 0.24
PDLIM2-217ENST00000491330 Q6ZVL8 140 aa16.54■□□□□ 0.24
PDLIM2-217ENST00000491330 ZNF765Q7L2R6 523 aa16.54■□□□□ 0.24
PDLIM2-217ENST00000491330 NLRP8Q86W28 1048 aa16.54■□□□□ 0.24
PDLIM2-217ENST00000491330 RFX6Q8HWS3 928 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms