RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 MGEA5O60502 916 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 VCLP18206 1134 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 EPHA3P29320 983 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 PTDSS1P48651 473 aaKnown RBP7.35□□□□□ -1.23
NPHP3-208ENST00000490993 HERC3Q15034 1050 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 IRGCQ6NXR0 463 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 IZUMO2Q6UXV1 221 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 SPATA19Q7Z5L4 167 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 CTU1Q7Z7A3 348 aaKnown RBP7.35□□□□□ -1.23
NPHP3-208ENST00000490993 ZNF781Q8N8C0 355 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 RBM15BQ8NDT2 890 aaKnown RBP7.35□□□□□ -1.23
NPHP3-208ENST00000490993 C3orf58Q8NDZ4 430 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 MCOLN3Q8TDD5 553 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 C17orf80Q9BSJ5 609 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 C1orf21Q9H246 121 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 OPTCQ9UBM4 332 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 ZMYM5Q9UJ78 669 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 PCDHB9Q9Y5E1 797 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 SMCHD1A6NHR9 2005 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 C1orf232A0A0U1RR37 186 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 J3KR12 359 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 PRMT5O14744 637 aaPredicted RBP7.35□□□□□ -1.23
NPHP3-208ENST00000490993 CCNT2O60583 730 aaKnown RBP7.35□□□□□ -1.23
NPHP3-208ENST00000490993 ENTPD5O75356 428 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 LATS1O95835 1130 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 AHSGP02765 367 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 DLDP09622 509 aaKnown RBP7.35□□□□□ -1.23
NPHP3-208ENST00000490993 IDO1P14902 403 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 PCSK2P16519 638 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 PTGER3P43115 390 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 PCLAFQ15004 111 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 LRRC36Q1X8D7 754 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 CLLU1OSQ5K130 101 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 LRRTM3Q86VH5 581 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 CIR1Q86X95 450 aaPredicted RBP7.35□□□□□ -1.23
NPHP3-208ENST00000490993 DHFR2Q86XF0 187 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 SPATA6LQ8N4H0 392 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 OR52K2Q8NGK3 314 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 TRPC4APQ8TEL6 797 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 ACDQ96AP0 544 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 ZNF184Q99676 751 aaPredicted RBP7.35□□□□□ -1.23
NPHP3-208ENST00000490993 CADM1Q9BY67 442 aaKnown RBP7.35□□□□□ -1.23
NPHP3-208ENST00000490993 ZFYVE1Q9HBF4 777 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 DYTNA2CJ06 578 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 TMEM247A6NEH6 219 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 E2F6O75461 281 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 ESR1P03372 595 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 PIRTP0C851 137 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 EEF1DP29692 281 aaKnown RBP7.35□□□□□ -1.23
NPHP3-208ENST00000490993 APLP1P51693 650 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 NR6A1Q15406 480 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 ADRM1Q16186 407 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 ARHGAP36Q6ZRI8 547 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 NECAB2Q7Z6G3 386 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 C14orf80Q86SX3 495 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 NPWQ8N729 165 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 SCLYQ96I15 445 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 DNAJC1Q96KC8 554 aaKnown RBP7.35□□□□□ -1.23
NPHP3-208ENST00000490993 EXOC2Q96KP1 924 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 FCRL3Q96P31 734 aaPredicted RBP7.35□□□□□ -1.23
NPHP3-208ENST00000490993 ECSITQ9BQ95 431 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 IL1RL2Q9HB29 575 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 NMUR1Q9HB89 426 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 SEMA4BQ9NPR2 832 aaPredicted RBP7.35□□□□□ -1.23
NPHP3-208ENST00000490993 NUDT4Q9NZJ9 180 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 CCDC167Q9P0B6 97 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 NDUFA13Q9P0J0 144 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 SLC17A6Q9P2U8 582 aa7.35□□□□□ -1.23
NPHP3-208ENST00000490993 CCDC154A6NI56 674 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 TK2O00142 265 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 OTCP00480 354 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 ALDOAP04075 364 aaKnown RBP7.34□□□□□ -1.23
NPHP3-208ENST00000490993 ANXA5P08758 320 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 HNRNPLP14866 589 aaKnown RBP eCLIP7.34□□□□□ -1.23
NPHP3-208ENST00000490993 ANPEPP15144 967 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 NUMBP49757 651 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 ERFP50548 548 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 DNAJB13P59910 316 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 IRF9Q00978 393 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 CCDC142Q17RM4 750 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 TCHHL1Q5QJ38 904 aaPredicted RBP7.34□□□□□ -1.23
NPHP3-208ENST00000490993 GPR158Q5T848 1215 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 GPRIN3Q6ZVF9 776 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 TBC1D19Q8N5T2 526 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 GDPD5Q8WTR4 605 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 SKA1Q96BD8 255 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 IGSF21Q96ID5 467 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 ACTR8Q9H981 624 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 SPAG4Q9NPE6 437 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 MAN1C1Q9NR34 630 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 STX18Q9P2W9 335 aaKnown RBP7.34□□□□□ -1.23
NPHP3-208ENST00000490993 C2orf71A6NGG8 1288 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 EVPLLA8MZ36 301 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 TBC1D4O60343 1298 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 SYNCRIPO60506 623 aaKnown RBP7.34□□□□□ -1.23
NPHP3-208ENST00000490993 PDE5AO76074 875 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 CLTBP09497 229 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 AOC1P19801 751 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 FGFR3P22607 806 aa7.34□□□□□ -1.23
NPHP3-208ENST00000490993 MAGEA3P43357 314 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms