RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 CCNYQ8ND76 341 aa31.39■■■□□ 2.62
LDB1-204ENST00000490751 SCG3Q8WXD2 468 aaKnown RBP31.39■■■□□ 2.62
LDB1-204ENST00000490751 DTD2Q96FN9 168 aa31.39■■■□□ 2.62
LDB1-204ENST00000490751 DEPDC7Q96QD5 511 aa31.39■■■□□ 2.62
LDB1-204ENST00000490751 LGR4Q9BXB1 951 aa31.39■■■□□ 2.62
LDB1-204ENST00000490751 MRPL40Q9NQ50 206 aaKnown RBP31.39■■■□□ 2.62
LDB1-204ENST00000490751 KCTD5Q9NXV2 234 aa31.39■■■□□ 2.62
LDB1-204ENST00000490751 PCDHB1Q9Y5F3 818 aa31.39■■■□□ 2.62
LDB1-204ENST00000490751 COL27A1Q8IZC6 1860 aaPredicted RBP31.38■■■□□ 2.61
LDB1-204ENST00000490751 ZNF487B1APH4 448 aa31.38■■■□□ 2.61
LDB1-204ENST00000490751 PSMD11O00231 422 aa31.38■■■□□ 2.61
LDB1-204ENST00000490751 KRT1P04264 644 aa31.38■■■□□ 2.61
LDB1-204ENST00000490751 TGM2P21980 687 aa31.38■■■□□ 2.61
LDB1-204ENST00000490751 CES1P23141 567 aa31.38■■■□□ 2.61
LDB1-204ENST00000490751 IHHQ14623 411 aa31.38■■■□□ 2.61
LDB1-204ENST00000490751 PERM1Q5SV97 790 aa31.38■■■□□ 2.61
LDB1-204ENST00000490751 LVRNQ6Q4G3 990 aa31.38■■■□□ 2.61
LDB1-204ENST00000490751 CRTC1Q6UUV9 634 aa31.38■■■□□ 2.61
LDB1-204ENST00000490751 NDUFAF2Q8N183 169 aa31.38■■■□□ 2.61
LDB1-204ENST00000490751 SDR16C5Q8N3Y7 309 aa31.38■■■□□ 2.61
LDB1-204ENST00000490751 PLD5Q8N7P1 536 aa31.38■■■□□ 2.61
LDB1-204ENST00000490751 TC2NQ8N9U0 490 aa31.38■■■□□ 2.61
LDB1-204ENST00000490751 TPCN2Q8NHX9 752 aa31.38■■■□□ 2.61
LDB1-204ENST00000490751 TRAF3IP1Q8TDR0 691 aaPredicted RBP31.38■■■□□ 2.61
LDB1-204ENST00000490751 NAT6Q93015 286 aa31.38■■■□□ 2.61
LDB1-204ENST00000490751 RBM15Q96T37 977 aaKnown RBP eCLIP31.38■■■□□ 2.619e-9■■□□□ 14.5
LDB1-204ENST00000490751 C3orf70A6NLC5 250 aaPredicted RBP31.37■■■□□ 2.61
LDB1-204ENST00000490751 TCEAL1Q15170 157 aa31.37■■■□□ 2.61
LDB1-204ENST00000490751 VSIG1Q86XK7 387 aa31.37■■■□□ 2.61
LDB1-204ENST00000490751 ARRDC2Q8TBH0 407 aa31.37■■■□□ 2.61
LDB1-204ENST00000490751 SMIM14Q96QK8 99 aa31.37■■■□□ 2.61
LDB1-204ENST00000490751 LGMNQ99538 433 aa31.37■■■□□ 2.61
LDB1-204ENST00000490751 TDRD1Q9BXT4 1180 aaKnown RBP31.37■■■□□ 2.61
LDB1-204ENST00000490751 SIRPGQ9P1W8 387 aa31.37■■■□□ 2.61
LDB1-204ENST00000490751 GULP1Q9UBP9 304 aa31.37■■■□□ 2.61
LDB1-204ENST00000490751 PADI4Q9UM07 663 aa31.37■■■□□ 2.61
LDB1-204ENST00000490751 HYOU1Q9Y4L1 999 aa31.37■■■□□ 2.61
LDB1-204ENST00000490751 HEY1Q9Y5J3 304 aa31.37■■■□□ 2.61
LDB1-204ENST00000490751 ADAMTS20P59510 1910 aa31.37■■■□□ 2.61
LDB1-204ENST00000490751 RP1P56715 2156 aa31.37■■■□□ 2.61
LDB1-204ENST00000490751 A0A0U1RQS6 177 aa31.36■■■□□ 2.61
LDB1-204ENST00000490751 TNFRSF10CO14798 259 aa31.36■■■□□ 2.61
LDB1-204ENST00000490751 CSO75390 466 aaKnown RBP31.36■■■□□ 2.61
LDB1-204ENST00000490751 KRT10P13645 584 aa31.36■■■□□ 2.61
LDB1-204ENST00000490751 SLC1A1P43005 524 aa31.36■■■□□ 2.61
LDB1-204ENST00000490751 NIPAL4Q0D2K0 466 aa31.36■■■□□ 2.61
LDB1-204ENST00000490751 LRRC38Q5VT99 294 aa31.36■■■□□ 2.61
LDB1-204ENST00000490751 SLC9A4Q6AI14 798 aa31.36■■■□□ 2.61
LDB1-204ENST00000490751 C19orf48Q6RUI8 117 aa31.36■■■□□ 2.61
LDB1-204ENST00000490751 Q6ZVL8 140 aa31.36■■■□□ 2.61
LDB1-204ENST00000490751 HEATR4Q86WZ0 1026 aa31.36■■■□□ 2.61
LDB1-204ENST00000490751 ARL10Q8N8L6 244 aa31.36■■■□□ 2.61
LDB1-204ENST00000490751 KYQ8NBH2 561 aa31.36■■■□□ 2.61
LDB1-204ENST00000490751 ANP32EQ9BTT0 268 aa31.36■■■□□ 2.61
LDB1-204ENST00000490751 MOSPD1Q9UJG1 213 aa31.36■■■□□ 2.61
LDB1-204ENST00000490751 GPR34Q9UPC5 381 aa31.36■■■□□ 2.61
LDB1-204ENST00000490751 LHX6Q9UPM6 363 aa31.36■■■□□ 2.61
LDB1-204ENST00000490751 CHKBQ9Y259 395 aa31.36■■■□□ 2.61
LDB1-204ENST00000490751 CELSR3Q9NYQ7 3312 aa31.35■■■□□ 2.61
LDB1-204ENST00000490751 URB1O60287 2271 aaKnown RBP31.35■■■□□ 2.61
LDB1-204ENST00000490751 A0A0J9YYE9 177 aa31.35■■■□□ 2.61
LDB1-204ENST00000490751 KCNK1O00180 336 aa31.35■■■□□ 2.61
LDB1-204ENST00000490751 PDE2AO00408 941 aaPredicted RBP31.35■■■□□ 2.61
LDB1-204ENST00000490751 APOL1O14791 398 aa31.35■■■□□ 2.61
LDB1-204ENST00000490751 TRBC1P01850 177 aa31.35■■■□□ 2.61
LDB1-204ENST00000490751 MYCLP1P12525 358 aaPredicted RBP31.35■■■□□ 2.61
LDB1-204ENST00000490751 TNNT1P13805 278 aa31.35■■■□□ 2.61
LDB1-204ENST00000490751 EPHB1P54762 984 aa31.35■■■□□ 2.61
LDB1-204ENST00000490751 PPIDQ08752 370 aaKnown RBP31.35■■■□□ 2.61
LDB1-204ENST00000490751 LRRC66Q68CR7 880 aa31.35■■■□□ 2.61
LDB1-204ENST00000490751 RHOT1Q8IXI2 618 aa31.35■■■□□ 2.61
LDB1-204ENST00000490751 RNF25Q96BH1 459 aaPredicted RBP31.35■■■□□ 2.61
LDB1-204ENST00000490751 MAK16Q9BXY0 300 aaKnown RBP31.35■■■□□ 2.61
LDB1-204ENST00000490751 CYP4F12Q9HCS2 524 aa31.35■■■□□ 2.61
LDB1-204ENST00000490751 PHPT1Q9NRX4 125 aaPredicted RBP31.35■■■□□ 2.61
LDB1-204ENST00000490751 DSPP15924 2871 aaKnown RBP31.35■■■□□ 2.61
LDB1-204ENST00000490751 GOLGA6CA6NDK9 693 aa31.34■■■□□ 2.61
LDB1-204ENST00000490751 GOLGA6BA6NDN3 693 aa31.34■■■□□ 2.61
LDB1-204ENST00000490751 JCHAINP01591 159 aa31.34■■■□□ 2.61
LDB1-204ENST00000490751 GOLGA6DP0CG33 693 aa31.34■■■□□ 2.61
LDB1-204ENST00000490751 CA4P22748 312 aa31.34■■■□□ 2.61
LDB1-204ENST00000490751 MAGEA1P43355 309 aa31.34■■■□□ 2.61
LDB1-204ENST00000490751 ODF2Q5BJF6 829 aa31.34■■■□□ 2.61
LDB1-204ENST00000490751 TEX101Q9BY14 249 aa31.34■■■□□ 2.61
LDB1-204ENST00000490751 GOLGA6AQ9NYA3 693 aa31.34■■■□□ 2.61
LDB1-204ENST00000490751 LAMA5O15230 3695 aa31.33■■■□□ 2.61
LDB1-204ENST00000490751 SPOPO43791 374 aa31.33■■■□□ 2.61
LDB1-204ENST00000490751 BRINP1O60477 761 aa31.33■■■□□ 2.61
LDB1-204ENST00000490751 COMTP21964 271 aa31.33■■■□□ 2.61
LDB1-204ENST00000490751 RAET1GQ6H3X3 334 aa31.33■■■□□ 2.61
LDB1-204ENST00000490751 TECPR1Q7Z6L1 1165 aa31.33■■■□□ 2.61
LDB1-204ENST00000490751 RFX6Q8HWS3 928 aa31.33■■■□□ 2.61
LDB1-204ENST00000490751 HNRNPLLQ8WVV9 542 aaKnown RBP31.33■■■□□ 2.61
LDB1-204ENST00000490751 DCBLD2Q96PD2 775 aa31.33■■■□□ 2.61
LDB1-204ENST00000490751 CCDC3Q9BQI4 270 aa31.33■■■□□ 2.61
LDB1-204ENST00000490751 TMEM168Q9H0V1 697 aa31.33■■■□□ 2.61
LDB1-204ENST00000490751 DDX56Q9NY93 547 aaKnown RBP31.33■■■□□ 2.61
LDB1-204ENST00000490751 FAM208BQ5VWN6 2430 aa31.32■■■□□ 2.6
LDB1-204ENST00000490751 PRSS38A1L453 326 aa31.32■■■□□ 2.6
LDB1-204ENST00000490751 TLX3O43711 291 aaPredicted RBP31.32■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms