RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 DENND5AQ6IQ26 1287 aa10.96□□□□□ -0.65
VARS2-210ENST00000490699 EMBQ6PCB8 327 aa10.96□□□□□ -0.65
VARS2-210ENST00000490699 ZDHHC24Q6UX98 284 aa10.96□□□□□ -0.65
VARS2-210ENST00000490699 LYSMD3Q7Z3D4 306 aa10.96□□□□□ -0.65
VARS2-210ENST00000490699 CAND1Q86VP6 1230 aaKnown RBP10.96□□□□□ -0.65
VARS2-210ENST00000490699 ZSWIM9Q86XI8 627 aa10.96□□□□□ -0.65
VARS2-210ENST00000490699 OTUD6BQ8N6M0 293 aa10.96□□□□□ -0.65
VARS2-210ENST00000490699 STYXQ8WUJ0 223 aa10.96□□□□□ -0.65
VARS2-210ENST00000490699 CFAP36Q96G28 342 aa10.96□□□□□ -0.65
VARS2-210ENST00000490699 EBNA1BP2Q99848 306 aaKnown RBP10.96□□□□□ -0.65
VARS2-210ENST00000490699 C19orf43Q9BQ61 176 aa10.96□□□□□ -0.65
VARS2-210ENST00000490699 PARD6BQ9BYG5 372 aa10.96□□□□□ -0.65
VARS2-210ENST00000490699 PCED1AQ9H1Q7 454 aa10.96□□□□□ -0.65
VARS2-210ENST00000490699 CD248Q9HCU0 757 aa10.96□□□□□ -0.65
VARS2-210ENST00000490699 PRMT8Q9NR22 394 aaPredicted RBP10.96□□□□□ -0.65
VARS2-210ENST00000490699 ZDHHC18Q9NUE0 388 aa10.96□□□□□ -0.65
VARS2-210ENST00000490699 SYBUQ9NX95 663 aa10.96□□□□□ -0.65
VARS2-210ENST00000490699 DLGAP2Q9P1A6 1054 aa10.96□□□□□ -0.65
VARS2-210ENST00000490699 APPL1Q9UKG1 709 aa10.96□□□□□ -0.65
VARS2-210ENST00000490699 RIMKLBQ9ULI2 386 aa10.96□□□□□ -0.65
VARS2-210ENST00000490699 SOX13Q9UN79 622 aa10.96□□□□□ -0.65
VARS2-210ENST00000490699 CHMP2BQ9UQN3 213 aa10.96□□□□□ -0.65
VARS2-210ENST00000490699 FADS3Q9Y5Q0 445 aa10.96□□□□□ -0.65
VARS2-210ENST00000490699 UNC80Q8N2C7 3258 aa10.96□□□□□ -0.66
VARS2-210ENST00000490699 FAM237BA0A1B0GVD1 139 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 PRR33A8MZF0 331 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 PLK4O00444 970 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 WNT9AO14904 365 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 AREL1O15033 823 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 RNGTTO60942 597 aaKnown RBP10.95□□□□□ -0.66
VARS2-210ENST00000490699 AVILO75366 819 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 CLDN7O95471 211 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 IGLV3-19P01714 112 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 GSTA2P09210 222 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 HMGCLP35914 325 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 PPARGP37231 505 aaPredicted RBP10.95□□□□□ -0.66
VARS2-210ENST00000490699 SPAM1P38567 509 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 ELK3P41970 407 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 MAGEA3P43357 314 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 MAGEA4P43358 317 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 LIG3P49916 1009 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 METAP1P53582 386 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 PTPN5P54829 565 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 VSNL1P62760 191 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 MTM1Q13496 603 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 THOC5Q13769 683 aaKnown RBP10.95□□□□□ -0.66
VARS2-210ENST00000490699 IHHQ14623 411 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 BRD3Q15059 726 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 CNGA3Q16281 694 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 SETMARQ53H47 684 aaPredicted RBP10.95□□□□□ -0.66
VARS2-210ENST00000490699 TMEM31Q5JXX7 168 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 FNBP1LQ5T0N5 605 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 TSTD2Q5T7W7 516 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 CRTC1Q6UUV9 634 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 CCNI2Q6ZMN8 369 aaPredicted RBP10.95□□□□□ -0.66
VARS2-210ENST00000490699 ZNF534Q76KX8 674 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 TRMT10CQ7L0Y3 403 aaKnown RBP10.95□□□□□ -0.66
VARS2-210ENST00000490699 LONP2Q86WA8 852 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 NRSN1Q8IZ57 195 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 TMEM105Q8N8V8 129 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.95□□□□□ -0.66
VARS2-210ENST00000490699 FBXO36Q8NEA4 188 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 CDKL2Q92772 493 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 ZNF669Q96BR6 464 aaPredicted RBP10.95□□□□□ -0.66
VARS2-210ENST00000490699 NUS1Q96E22 293 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 TOE1Q96GM8 510 aaKnown RBP10.95□□□□□ -0.66
VARS2-210ENST00000490699 NSMCE3Q96MG7 304 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 KIFC1Q9BW19 673 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 VPS37BQ9H9H4 285 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 PPANQ9NQ55 473 aaKnown RBP10.95□□□□□ -0.66
VARS2-210ENST00000490699 POLR3BQ9NW08 1133 aaPredicted RBP10.95□□□□□ -0.66
VARS2-210ENST00000490699 ARL5AQ9Y689 179 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 SLC30A1Q9Y6M5 507 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 RPS6KL1Q9Y6S9 549 aa10.95□□□□□ -0.66
VARS2-210ENST00000490699 A0A1W2PQU0 124 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 MEI4A8MW99 385 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 BHMG1C9JSJ3 638 aaPredicted RBP10.94□□□□□ -0.66
VARS2-210ENST00000490699 E7ESA3 106 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 MMP20O60882 483 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 RPP40O75818 363 aaKnown RBP10.94□□□□□ -0.66
VARS2-210ENST00000490699 USP1O94782 785 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 C6P13671 934 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 TSHRP16473 764 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 ITGALP20701 1170 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 AVPR2P30518 371 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 STX2P32856 288 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 CNR2P34972 360 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 PXNP49023 591 aaPredicted RBP10.94□□□□□ -0.66
VARS2-210ENST00000490699 STC1P52823 247 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 CRADDP78560 199 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 ITGA9Q13797 1035 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 TRADDQ15628 312 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 MAP7D1Q3KQU3 841 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 AARS2Q5JTZ9 985 aaKnown RBP10.94□□□□□ -0.66
VARS2-210ENST00000490699 AFTPHQ6ULP2 937 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 LIPIQ6XZB0 460 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 TSPAN33Q86UF1 283 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 WDR5BQ86VZ2 330 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 TRIM69Q86WT6 500 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 HORMAD1Q86X24 394 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms