RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 TTC39CQ8N584 583 aa4□□□□□ -1.77
CD46-216ENST00000490278 WDTC1Q8N5D0 677 aa4□□□□□ -1.77
CD46-216ENST00000490278 SGCDQ92629 289 aa4□□□□□ -1.77
CD46-216ENST00000490278 ARHGEF26Q96DR7 871 aa4□□□□□ -1.77
CD46-216ENST00000490278 METTL2AQ96IZ6 378 aaKnown RBP4□□□□□ -1.77
CD46-216ENST00000490278 CMTM3Q96MX0 182 aa4□□□□□ -1.77
CD46-216ENST00000490278 CAMK1GQ96NX5 476 aa4□□□□□ -1.77
CD46-216ENST00000490278 EBF3Q9H4W6 596 aa4□□□□□ -1.77
CD46-216ENST00000490278 ESRP2Q9H6T0 727 aaKnown RBP4□□□□□ -1.77
CD46-216ENST00000490278 SYNCQ9H7C4 482 aa4□□□□□ -1.77
CD46-216ENST00000490278 RANGRFQ9HD47 186 aaPredicted RBP4□□□□□ -1.77
CD46-216ENST00000490278 HINT3Q9NQE9 182 aaKnown RBP4□□□□□ -1.77
CD46-216ENST00000490278 HAUS2Q9NVX0 235 aa4□□□□□ -1.77
CD46-216ENST00000490278 PCDHA7Q9UN72 937 aa4□□□□□ -1.77
CD46-216ENST00000490278 CDC14AQ9UNH5 594 aa4□□□□□ -1.77
CD46-216ENST00000490278 MTMR6Q9Y217 621 aa4□□□□□ -1.77
CD46-216ENST00000490278 A6NCN8 305 aa3.99□□□□□ -1.77
CD46-216ENST00000490278 PTGES3LE9PB15 166 aa3.99□□□□□ -1.77
CD46-216ENST00000490278 SCAMP1O15126 338 aa3.99□□□□□ -1.77
CD46-216ENST00000490278 ZIC3O60481 467 aa3.99□□□□□ -1.77
CD46-216ENST00000490278 CH25HO95992 272 aa3.99□□□□□ -1.77
CD46-216ENST00000490278 CYC1P08574 325 aa3.99□□□□□ -1.77
CD46-216ENST00000490278 HNRNPH1P31943 449 aaKnown RBP3.99□□□□□ -1.77
CD46-216ENST00000490278 PCYT1AP49585 367 aa3.99□□□□□ -1.77
CD46-216ENST00000490278 METAP2P50579 478 aaKnown RBP eCLIP3.99□□□□□ -1.77
CD46-216ENST00000490278 RAD23BP54727 409 aa3.99□□□□□ -1.77
CD46-216ENST00000490278 CRYZQ08257 329 aaKnown RBP3.99□□□□□ -1.77
CD46-216ENST00000490278 TRAF2Q12933 501 aa3.99□□□□□ -1.77
CD46-216ENST00000490278 MEA1Q16626 185 aa3.99□□□□□ -1.77
CD46-216ENST00000490278 EFHC1Q5JVL4 640 aa3.99□□□□□ -1.77
CD46-216ENST00000490278 CFAP161Q6P656 301 aa3.99□□□□□ -1.77
CD46-216ENST00000490278 CLEC4GQ6UXB4 293 aa3.99□□□□□ -1.77
CD46-216ENST00000490278 B3GNT6Q6ZMB0 384 aa3.99□□□□□ -1.77
CD46-216ENST00000490278 GLDNQ6ZMI3 551 aaPredicted RBP3.99□□□□□ -1.77
CD46-216ENST00000490278 ZC3HC1Q86WB0 502 aaKnown RBP3.99□□□□□ -1.77
CD46-216ENST00000490278 RPAP2Q8IXW5 612 aaPredicted RBP3.99□□□□□ -1.77
CD46-216ENST00000490278 SPATA6LQ8N4H0 392 aa3.99□□□□□ -1.77
CD46-216ENST00000490278 NEXN-AS1Q8NBZ9 246 aa3.99□□□□□ -1.77
CD46-216ENST00000490278 ADAMTS14Q8WXS8 1223 aa3.99□□□□□ -1.77
CD46-216ENST00000490278 C1orf74Q96LT6 269 aa3.99□□□□□ -1.77
CD46-216ENST00000490278 HARBI1Q96MB7 349 aa3.99□□□□□ -1.77
CD46-216ENST00000490278 SLC25A33Q9BSK2 321 aa3.99□□□□□ -1.77
CD46-216ENST00000490278 FTOQ9C0B1 505 aaKnown RBP eCLIP3.99□□□□□ -1.77
CD46-216ENST00000490278 GHITMQ9H3K2 345 aa3.99□□□□□ -1.77
CD46-216ENST00000490278 NDST4Q9H3R1 872 aa3.99□□□□□ -1.77
CD46-216ENST00000490278 PDZD7Q9H5P4 517 aa3.99□□□□□ -1.77
CD46-216ENST00000490278 AGO1Q9UL18 857 aaKnown RBP3.99□□□□□ -1.77
CD46-216ENST00000490278 MAU2Q9Y6X3 613 aa3.99□□□□□ -1.77
CD46-216ENST00000490278 FRMD3A2A2Y4 597 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 FAM90A8PA6NJQ4 464 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 PRSS47A8MTI9 375 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 VILLO15195 856 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 HCRTR2O43614 444 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 SERPINI2O75830 405 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 GFPT2O94808 682 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 FTCDO95954 541 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 GLUD1P00367 558 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 FAM90A13PP0C7W8 464 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 FAM90A24PP0C7X0 464 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 G6PDP11413 515 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 ALOX12P18054 663 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 MAOAP21397 527 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 HOXA11P31270 313 aaPredicted RBP3.98□□□□□ -1.77
CD46-216ENST00000490278 STX2P32856 288 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 HOXD13P35453 343 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 HADHAP40939 763 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 EIF2S3P41091 472 aaKnown RBP3.98□□□□□ -1.77
CD46-216ENST00000490278 UBA7P41226 1012 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 PIK3CAP42336 1068 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 GLUD2P49448 558 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 LINC00205P59089 165 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 PRKG2Q13237 762 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 PDE1CQ14123 709 aaPredicted RBP3.98□□□□□ -1.77
CD46-216ENST00000490278 EFNB3Q15768 340 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 ADIPOQQ15848 244 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 GKAP1Q5VSY0 366 aaPredicted RBP3.98□□□□□ -1.77
CD46-216ENST00000490278 GGNBP1Q5YKI7 109 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 PQLC2Q6ZP29 291 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 TICAM1Q8IUC6 712 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 FBXL14Q8N1E6 418 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 OR14L1PQ8NHC6 308 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 IGSF8Q969P0 613 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 RRNAD1Q96FB5 475 aaKnown RBP3.98□□□□□ -1.77
CD46-216ENST00000490278 PPP1R13BQ96KQ4 1090 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 SH3GL2Q99962 352 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 NCAPGQ9BPX3 1015 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 NTPCRQ9BSD7 190 aaKnown RBP3.98□□□□□ -1.77
CD46-216ENST00000490278 HAUS8Q9BT25 410 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 PPP1R3EQ9H7J1 279 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 SLC28A3Q9HAS3 691 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 VPS28Q9UK41 221 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 GPR34Q9UPC5 381 aa3.98□□□□□ -1.77
CD46-216ENST00000490278 ATXN2Q99700 1313 aaKnown RBP3.97□□□□□ -1.77
CD46-216ENST00000490278 A8MZ25 164 aa3.97□□□□□ -1.77
CD46-216ENST00000490278 VCYO14598 125 aa3.97□□□□□ -1.77
CD46-216ENST00000490278 OR2C1O95371 312 aa3.97□□□□□ -1.77
CD46-216ENST00000490278 PRSS2P07478 247 aa3.97□□□□□ -1.77
CD46-216ENST00000490278 PSMB10P40306 273 aa3.97□□□□□ -1.77
CD46-216ENST00000490278 CLCN3P51790 818 aa3.97□□□□□ -1.77
CD46-216ENST00000490278 ZBED6P86452 979 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms