RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 CEBPZQ03701 1054 aaKnown RBP3.01□□□□□ -1.93
UBXN4-208ENST00000490163 KLHL26Q53HC5 615 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 ZNF805Q5CZA5 627 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 PM20D1Q6GTS8 502 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 SASS6Q6UVJ0 657 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 KDM1BQ8NB78 822 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 PAPD5Q8NDF8 572 aaKnown RBP3.01□□□□□ -1.93
UBXN4-208ENST00000490163 BHLHE22Q8NFJ8 381 aaPredicted RBP3.01□□□□□ -1.93
UBXN4-208ENST00000490163 ATG4AQ8WYN0 398 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 ATP6V0A1Q93050 837 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 KLHL15Q96M94 604 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 UROC1Q96N76 676 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 CTDSP1Q9GZU7 261 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 S1PR5Q9H228 398 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 KCNK15Q9H427 330 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 CCDC134Q9H6E4 229 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 ZNF701Q9NV72 531 aaPredicted RBP3.01□□□□□ -1.93
UBXN4-208ENST00000490163 GRHL1Q9NZI5 618 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 COL4A3Q01955 1670 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 NUP155O75694 1391 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 PTCH1Q13635 1447 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 PLCH1Q4KWH8 1693 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 NKTRP30414 1462 aaKnown RBP3.01□□□□□ -1.93
UBXN4-208ENST00000490163 MEIS2O14770 477 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 RNF113AO15541 343 aaKnown RBP3.01□□□□□ -1.93
UBXN4-208ENST00000490163 RASSF9O75901 435 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 HOXC9P31274 260 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 OTX2P32243 289 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 RFC4P35249 363 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 CAPZA2P47755 286 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 SOX2P48431 317 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 HARS2P49590 506 aaKnown RBP3.01□□□□□ -1.93
UBXN4-208ENST00000490163 HNRNPKP61978 463 aaKnown RBP eCLIP3.01□□□□□ -1.93
UBXN4-208ENST00000490163 AP1B1Q10567 949 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 PKN1Q16512 942 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 NFIL3Q16649 462 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 HERC4Q5GLZ8 1057 aaPredicted RBP3.01□□□□□ -1.93
UBXN4-208ENST00000490163 SH2D4BQ5SQS7 431 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 VWA1Q6PCB0 445 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 CLEC17AQ6ZS10 378 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 RFX6Q8HWS3 928 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 SFTPA1Q8IWL2 248 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 ARL10Q8N8L6 244 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 HJURPQ8NCD3 748 aaPredicted RBP3.01□□□□□ -1.93
UBXN4-208ENST00000490163 FBXO15Q8NCQ5 510 aaPredicted RBP3.01□□□□□ -1.93
UBXN4-208ENST00000490163 CADM4Q8NFZ8 388 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 VPS33AQ96AX1 596 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 MROH8Q9H579 483 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 DNAJC17Q9NVM6 304 aaKnown RBP3.01□□□□□ -1.93
UBXN4-208ENST00000490163 HAO2Q9NYQ3 351 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 FOXA2Q9Y261 457 aaPredicted RBP3.01□□□□□ -1.93
UBXN4-208ENST00000490163 SLC5A6Q9Y289 635 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 KIF3AQ9Y496 699 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 PCDHAC2Q9Y5I4 1007 aa3.01□□□□□ -1.93
UBXN4-208ENST00000490163 RGPD1P0DJD0 1748 aa3□□□□□ -1.93
UBXN4-208ENST00000490163 RGPD8O14715 1765 aaPredicted RBP3□□□□□ -1.93
UBXN4-208ENST00000490163 TULP4Q9NRJ4 1543 aa3□□□□□ -1.93
UBXN4-208ENST00000490163 CLEC18AA5D8T8 446 aa3□□□□□ -1.93
UBXN4-208ENST00000490163 BTBD18B2RXH4 712 aa3□□□□□ -1.93
UBXN4-208ENST00000490163 SMAD9O15198 467 aaKnown RBP3□□□□□ -1.93
UBXN4-208ENST00000490163 PKMP14618 531 aaKnown RBP3□□□□□ -1.93
UBXN4-208ENST00000490163 HNMTP50135 292 aa3□□□□□ -1.93
UBXN4-208ENST00000490163 ATP2C1P98194 919 aaPredicted RBP3□□□□□ -1.93
UBXN4-208ENST00000490163 ZBTB16Q05516 673 aa3□□□□□ -1.93
UBXN4-208ENST00000490163 ARHGAP1Q07960 439 aa3□□□□□ -1.93
UBXN4-208ENST00000490163 PPP2R5BQ15173 497 aa3□□□□□ -1.93
UBXN4-208ENST00000490163 WDR72Q3MJ13 1102 aa3□□□□□ -1.93
UBXN4-208ENST00000490163 SUSD4Q5VX71 490 aa3□□□□□ -1.93
UBXN4-208ENST00000490163 FBXO42Q6P3S6 717 aa3□□□□□ -1.93
UBXN4-208ENST00000490163 PSRC1Q6PGN9 363 aaPredicted RBP3□□□□□ -1.93
UBXN4-208ENST00000490163 TAGAPQ8N103 731 aa3□□□□□ -1.93
UBXN4-208ENST00000490163 TMEM132CQ8N3T6 1108 aa3□□□□□ -1.93
UBXN4-208ENST00000490163 CLEC18CQ8NCF0 446 aa3□□□□□ -1.93
UBXN4-208ENST00000490163 SLC17A8Q8NDX2 589 aa3□□□□□ -1.93
UBXN4-208ENST00000490163 FAM110DQ8TAY7 271 aaPredicted RBP3□□□□□ -1.93
UBXN4-208ENST00000490163 SYAP1Q96A49 352 aaPredicted RBP3□□□□□ -1.93
UBXN4-208ENST00000490163 DPYSL5Q9BPU6 564 aa3□□□□□ -1.93
UBXN4-208ENST00000490163 ZNF577Q9BSK1 485 aa3□□□□□ -1.93
UBXN4-208ENST00000490163 FRMD8Q9BZ67 464 aaPredicted RBP3□□□□□ -1.93
UBXN4-208ENST00000490163 ISCUQ9H1K1 167 aa3□□□□□ -1.93
UBXN4-208ENST00000490163 BCAS3Q9H6U6 928 aa3□□□□□ -1.93
UBXN4-208ENST00000490163 YY1AP1Q9H869 796 aa3□□□□□ -1.93
UBXN4-208ENST00000490163 DNAJC11Q9NVH1 559 aa3□□□□□ -1.93
UBXN4-208ENST00000490163 MCM9Q9NXL9 1143 aa3□□□□□ -1.93
UBXN4-208ENST00000490163 ACTR3BQ9P1U1 418 aa3□□□□□ -1.93
UBXN4-208ENST00000490163 SORCS3Q9UPU3 1222 aa3□□□□□ -1.93
UBXN4-208ENST00000490163 ADAMTS13Q76LX8 1427 aa3□□□□□ -1.93
UBXN4-208ENST00000490163 H0YGN5 161 aa3□□□□□ -1.93
UBXN4-208ENST00000490163 CD59P13987 128 aa3□□□□□ -1.93
UBXN4-208ENST00000490163 TCF4P15884 667 aa3□□□□□ -1.93
UBXN4-208ENST00000490163 TKTL1P51854 596 aa3□□□□□ -1.93
UBXN4-208ENST00000490163 LUMP51884 338 aaPredicted RBP3□□□□□ -1.93
UBXN4-208ENST00000490163 HNRNPMP52272 730 aaKnown RBP eCLIP3□□□□□ -1.93
UBXN4-208ENST00000490163 DEUP1Q05D60 604 aa3□□□□□ -1.93
UBXN4-208ENST00000490163 SCN1BQ07699 218 aa3□□□□□ -1.93
UBXN4-208ENST00000490163 PDZK1IP1Q13113 114 aa3□□□□□ -1.93
UBXN4-208ENST00000490163 MSLNQ13421 630 aaPredicted RBP3□□□□□ -1.93
UBXN4-208ENST00000490163 BYSLQ13895 437 aaKnown RBP3□□□□□ -1.93
UBXN4-208ENST00000490163 FGFBP1Q14512 234 aa3□□□□□ -1.93
UBXN4-208ENST00000490163 TMEM266Q2M3C6 531 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms