RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 OR4D9Q8NGE8 314 aa13.98□□□□□ -0.17
VARS-227ENST00000489979 PATE1Q8WXA2 126 aa13.98□□□□□ -0.17
VARS-227ENST00000489979 TUBGCP2Q9BSJ2 902 aa13.98□□□□□ -0.17
VARS-227ENST00000489979 DDA1Q9BW61 102 aa13.98□□□□□ -0.17
VARS-227ENST00000489979 OCIAD1Q9NX40 245 aa13.98□□□□□ -0.17
VARS-227ENST00000489979 SPTAN1Q13813 2472 aaKnown RBP13.98□□□□□ -0.17
VARS-227ENST00000489979 DUX1O43812 170 aa13.97□□□□□ -0.17
VARS-227ENST00000489979 PRAMEF11O60813 436 aa13.97□□□□□ -0.17
VARS-227ENST00000489979 GFPT2O94808 682 aa13.97□□□□□ -0.17
VARS-227ENST00000489979 FUCA1P04066 466 aa13.97□□□□□ -0.17
VARS-227ENST00000489979 THRAP10827 490 aa13.97□□□□□ -0.17
VARS-227ENST00000489979 MYCLP1P12525 358 aaPredicted RBP13.97□□□□□ -0.17
VARS-227ENST00000489979 CSF2RBP32927 897 aa13.97□□□□□ -0.17
VARS-227ENST00000489979 GNPDA1P46926 289 aa13.97□□□□□ -0.17
VARS-227ENST00000489979 CSNK1DP48730 415 aa13.97□□□□□ -0.17
VARS-227ENST00000489979 PTP4A2Q12974 167 aa13.97□□□□□ -0.17
VARS-227ENST00000489979 CAMK4Q16566 473 aa13.97□□□□□ -0.17
VARS-227ENST00000489979 WDR59Q6PJI9 974 aa13.97□□□□□ -0.17
VARS-227ENST00000489979 SLC30A9Q6PML9 568 aa13.97□□□□□ -0.17
VARS-227ENST00000489979 FAM114A1Q8IWE2 563 aa13.97□□□□□ -0.17
VARS-227ENST00000489979 FAM26EQ8N5C1 309 aa13.97□□□□□ -0.17
VARS-227ENST00000489979 TSEN2Q8NCE0 465 aaKnown RBP13.97□□□□□ -0.17
VARS-227ENST00000489979 C9orf43Q8TAL5 461 aaPredicted RBP13.97□□□□□ -0.17
VARS-227ENST00000489979 ECHDC3Q96DC8 303 aa13.97□□□□□ -0.17
VARS-227ENST00000489979 CELF6Q96J87 481 aaKnown RBP13.97□□□□□ -0.17
VARS-227ENST00000489979 SELENOOQ9BVL4 669 aa13.97□□□□□ -0.17
VARS-227ENST00000489979 ASPSCR1Q9BZE9 553 aa13.97□□□□□ -0.17
VARS-227ENST00000489979 LRRC19Q9H756 370 aa13.97□□□□□ -0.17
VARS-227ENST00000489979 PHPT1Q9NRX4 125 aaPredicted RBP13.97□□□□□ -0.17
VARS-227ENST00000489979 TMEM9Q9P0T7 183 aa13.97□□□□□ -0.17
VARS-227ENST00000489979 FZD10Q9ULW2 581 aa13.97□□□□□ -0.17
VARS-227ENST00000489979 IGHV1OR21-1A0A087WYE8 117 aa13.96□□□□□ -0.17
VARS-227ENST00000489979 EFCAB7A8K855 629 aa13.96□□□□□ -0.17
VARS-227ENST00000489979 PPM1DO15297 605 aa13.96□□□□□ -0.17
VARS-227ENST00000489979 CAPN5O15484 640 aaPredicted RBP13.96□□□□□ -0.17
VARS-227ENST00000489979 FGF10O15520 208 aaPredicted RBP13.96□□□□□ -0.17
VARS-227ENST00000489979 CCP110O43303 1012 aa13.96□□□□□ -0.17
VARS-227ENST00000489979 PALMO75781 387 aa13.96□□□□□ -0.17
VARS-227ENST00000489979 CEACAM5P06731 702 aa13.96□□□□□ -0.17
VARS-227ENST00000489979 PRKAR1AP10644 381 aa13.96□□□□□ -0.17
VARS-227ENST00000489979 POLR2LP62875 67 aaKnown RBP13.96□□□□□ -0.17
VARS-227ENST00000489979 BCL2L1Q07817 233 aa13.96□□□□□ -0.17
VARS-227ENST00000489979 DCAF12Q5T6F0 453 aa13.96□□□□□ -0.17
VARS-227ENST00000489979 ANKS6Q68DC2 871 aa13.96□□□□□ -0.17
VARS-227ENST00000489979 HEATR4Q86WZ0 1026 aa13.96□□□□□ -0.17
VARS-227ENST00000489979 FAM129CQ86XR2 697 aa13.96□□□□□ -0.17
VARS-227ENST00000489979 NRSN1Q8IZ57 195 aa13.96□□□□□ -0.17
VARS-227ENST00000489979 NAGSQ8N159 534 aa13.96□□□□□ -0.17
VARS-227ENST00000489979 MLKLQ8NB16 471 aa13.96□□□□□ -0.17
VARS-227ENST00000489979 PTCD2Q8WV60 388 aaKnown RBP13.96□□□□□ -0.17
VARS-227ENST00000489979 NUS1Q96E22 293 aa13.96□□□□□ -0.17
VARS-227ENST00000489979 SLC45A3Q96JT2 553 aa13.96□□□□□ -0.17
VARS-227ENST00000489979 PSMG3-AS1Q96PY0 264 aa13.96□□□□□ -0.17
VARS-227ENST00000489979 FRMD8Q9BZ67 464 aaPredicted RBP13.96□□□□□ -0.17
VARS-227ENST00000489979 TRNAU1APQ9NX07 287 aaKnown RBP13.96□□□□□ -0.17
VARS-227ENST00000489979 ADAM22Q9P0K1 906 aa13.96□□□□□ -0.17
VARS-227ENST00000489979 B4GALT6Q9UBX8 382 aa13.96□□□□□ -0.17
VARS-227ENST00000489979 PILRAQ9UKJ1 303 aa13.96□□□□□ -0.17
VARS-227ENST00000489979 SUFUQ9UMX1 484 aa13.96□□□□□ -0.17
VARS-227ENST00000489979 PLAAQ9Y263 795 aa13.96□□□□□ -0.17
VARS-227ENST00000489979 ST14Q9Y5Y6 855 aa13.96□□□□□ -0.17
VARS-227ENST00000489979 USP9XQ93008 2570 aaPredicted RBP13.96□□□□□ -0.17
VARS-227ENST00000489979 UTP20O75691 2785 aaKnown RBP13.95□□□□□ -0.18
VARS-227ENST00000489979 SPTBN1Q01082 2364 aaKnown RBP13.95□□□□□ -0.18
VARS-227ENST00000489979 BLACEA4D250 179 aa13.95□□□□□ -0.18
VARS-227ENST00000489979 B4E171 279 aa13.95□□□□□ -0.18
VARS-227ENST00000489979 TRAFD1O14545 582 aaPredicted RBP13.95□□□□□ -0.18
VARS-227ENST00000489979 UNGP13051 313 aaPredicted RBP13.95□□□□□ -0.18
VARS-227ENST00000489979 TSPAN7P41732 249 aa13.95□□□□□ -0.18
VARS-227ENST00000489979 PAPOLAP51003 745 aaKnown RBP13.95□□□□□ -0.18
VARS-227ENST00000489979 NDST2P52849 883 aa13.95□□□□□ -0.18
VARS-227ENST00000489979 GSCP56915 257 aaPredicted RBP13.95□□□□□ -0.18
VARS-227ENST00000489979 TPI1P60174 286 aa13.95□□□□□ -0.18
VARS-227ENST00000489979 CTBSQ01459 385 aa13.95□□□□□ -0.18
VARS-227ENST00000489979 CDC20Q12834 499 aa13.95□□□□□ -0.18
VARS-227ENST00000489979 SQSTM1Q13501 440 aa13.95□□□□□ -0.18
VARS-227ENST00000489979 C4orf17Q53FE4 359 aa13.95□□□□□ -0.18
VARS-227ENST00000489979 TRIM72Q6ZMU5 477 aa13.95□□□□□ -0.18
VARS-227ENST00000489979 ABHD17AQ96GS6 310 aa13.95□□□□□ -0.18
VARS-227ENST00000489979 COQ10AQ96MF6 247 aa13.95□□□□□ -0.18
VARS-227ENST00000489979 NSMCE3Q96MG7 304 aa13.95□□□□□ -0.18
VARS-227ENST00000489979 PCDHB18PQ96TA0 734 aa13.95□□□□□ -0.18
VARS-227ENST00000489979 CINPQ9BW66 212 aaPredicted RBP13.95□□□□□ -0.18
VARS-227ENST00000489979 TEX101Q9BY14 249 aa13.95□□□□□ -0.18
VARS-227ENST00000489979 SLC39A8Q9C0K1 460 aa13.95□□□□□ -0.18
VARS-227ENST00000489979 ZMYND15Q9H091 742 aa13.95□□□□□ -0.18
VARS-227ENST00000489979 GPN2Q9H9Y4 310 aaPredicted RBP13.95□□□□□ -0.18
VARS-227ENST00000489979 KCNK4Q9NYG8 393 aa13.95□□□□□ -0.18
VARS-227ENST00000489979 NOTCH2Q04721 2471 aa13.95□□□□□ -0.18
VARS-227ENST00000489979 ICE1Q9Y2F5 2266 aa13.94□□□□□ -0.18
VARS-227ENST00000489979 LOC101059948A0A1B0GTJ6 334 aa13.94□□□□□ -0.18
VARS-227ENST00000489979 ARHGAP42A6NI28 874 aa13.94□□□□□ -0.18
VARS-227ENST00000489979 SIGLEC16A6NMB1 481 aa13.94□□□□□ -0.18
VARS-227ENST00000489979 OAS2P29728 719 aaKnown RBP13.94□□□□□ -0.18
VARS-227ENST00000489979 ADCY8P40145 1251 aa13.94□□□□□ -0.18
VARS-227ENST00000489979 NSFP46459 744 aaKnown RBP13.94□□□□□ -0.18
VARS-227ENST00000489979 POLD2P49005 469 aa13.94□□□□□ -0.18
VARS-227ENST00000489979 SCNN1BP51168 640 aa13.94□□□□□ -0.18
VARS-227ENST00000489979 RAB15P59190 212 aa13.94□□□□□ -0.18
VARS-227ENST00000489979 CDK3Q00526 305 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms