RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 HSPA4LO95757 839 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 TOP3BO95985 862 aaKnown RBP4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 GCP02774 474 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 IFNA16P05015 189 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 FCGR1AP12314 374 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 ATF6P18850 670 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 ARNTP27540 789 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 HTR1BP28222 390 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 MSX1P28360 303 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 ATICP31939 592 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 ARRB2P32121 409 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 UGT2B10P36537 528 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 CDKN2BP42772 138 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 NSFP46459 744 aaKnown RBP4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 RAP1GAPP47736 663 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 GCLMP48507 274 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 NDST1P52848 882 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 GABARAPL2P60520 117 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 ENPEPQ07075 957 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 SNTA1Q13424 505 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 TOP3AQ13472 1001 aaPredicted RBP4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 BMPR2Q13873 1038 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 GNA13Q14344 377 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 INPP5AQ14642 412 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 ATP13A4Q4VNC1 1196 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 ZNF484Q5JVG2 852 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 SAMD4BQ5PRF9 694 aaKnown RBP4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 TRAPPC3LQ5T215 181 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 ZFYVE27Q5T4F4 411 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 COL13A1Q5TAT6 717 aaPredicted RBP4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 C12orf60Q5U649 245 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 ARHGEF16Q5VV41 709 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 STEAP3Q658P3 488 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 PMF1Q6P1K2 205 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 KCNT2Q6UVM3 1135 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 ZNF767PQ75MW2 155 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 MON1BQ7L1V2 547 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 GDPD3Q7L5L3 318 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 ENOSF1Q7L5Y1 443 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 CHST15Q7LFX5 561 aaPredicted RBP4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 PAGE2Q7Z2X7 111 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 NOXA1Q86UR1 476 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 LIX1LQ8IVB5 337 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 AQP12AQ8IXF9 295 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 ZNF444Q8N0Y2 327 aaPredicted RBP4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 SYNE4Q8N205 404 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 CARNMT1Q8N4J0 409 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 DTX3Q8N9I9 347 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 TMEM35BQ8NCS4 154 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 FAM156AQ8NDB6 213 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 TTLQ8NG68 377 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 OR2T34Q8NGX1 318 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 OR2T3Q8NH03 318 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 FEZF2Q8TBJ5 459 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 LRRC20Q8TCA0 184 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 DYNC2LI1Q8TCX1 351 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 SLC16A10Q8TF71 515 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 CANT1Q8WVQ1 401 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 SEPT1Q8WYJ6 367 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 SGCDQ92629 289 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 HDAC2Q92769 488 aaKnown RBP4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 PROX1Q92786 737 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 SH3KBP1Q96B97 665 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 RNF170Q96K19 258 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 LPIN3Q9BQK8 851 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 ZSCAN5AQ9BUG6 496 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 KIFC1Q9BW19 673 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 ILKAPQ9H0C8 392 aaPredicted RBP4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 MMP27Q9H306 513 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 DSN1Q9H410 356 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 IFT22Q9H7X7 185 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 ACAD9Q9H845 621 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 JMJD4Q9H9V9 463 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 ZBTB26Q9HCK0 441 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 TIGARQ9NQ88 270 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 HPS4Q9NQG7 708 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 FARSBQ9NSD9 589 aaKnown RBP4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 ZC3H7BQ9UGR2 993 aaKnown RBP4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 ATP6V1HQ9UI12 483 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 FBXO5Q9UKT4 447 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 BAG5Q9UL15 447 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 RIPK3Q9Y572 518 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 PMF1-BGLAPU3KQ54 211 aa4.78□□□□□ -1.64
SNRNP40-206ENST00000489853 BAZ2AQ9UIF9 1905 aaKnown RBP4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 GOLGB1Q14789 3259 aaKnown RBP4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 KIF1AQ12756 1690 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 A0A0X1KG70 313 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 TRPC5OSA6NMA1 111 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 LEUTXA8MZ59 168 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 MEIS1O00470 390 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 SMAD7O15105 426 aaKnown RBP4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 SPINT1O43278 529 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 GABARAPO95166 117 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 CLIC3O95833 236 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 CCNE2O96020 404 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 CD4P01730 458 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 ICAM2P13598 275 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 CD1EP15812 388 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 CYP2A7P20853 494 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 CRHBPP24387 322 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms