RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 ARHGEF18Q6ZSZ5 1173 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 PTAR1Q7Z6K3 402 aaPredicted RBP11.09□□□□□ -0.63
CPSF7-212ENST00000489728 NRSN1Q8IZ57 195 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.09□□□□□ -0.63
CPSF7-212ENST00000489728 FAM71DQ8N9W8 422 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 OR13H1Q8NG92 308 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 ATL2Q8NHH9 583 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 SPATA22Q8NHS9 363 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 CCHCR1Q8TD31 782 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 ACTRT1Q8TDG2 376 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 ATG4AQ8WYN0 398 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 RMDN1Q96DB5 314 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 NUS1Q96E22 293 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 OXNAD1Q96HP4 312 aaPredicted RBP11.09□□□□□ -0.63
CPSF7-212ENST00000489728 BMFQ96LC9 184 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 TBATAQ96M53 351 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 OSBPL9Q96SU4 736 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 FAM118BQ9BPY3 351 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 C19orf43Q9BQ61 176 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 TMEM121Q9BTD3 319 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 GAREM1Q9H706 876 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 FZD3Q9NPG1 666 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 RAD18Q9NS91 495 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 NFKBIL1Q9UBC1 381 aaPredicted RBP11.09□□□□□ -0.63
CPSF7-212ENST00000489728 ZNF148Q9UQR1 794 aa11.09□□□□□ -0.63
CPSF7-212ENST00000489728 DRG1Q9Y295 367 aaKnown RBP11.09□□□□□ -0.63
CPSF7-212ENST00000489728 SPTY2D1-AS1A0A0U1RR47 76 aa11.08□□□□□ -0.64
CPSF7-212ENST00000489728 A0A1B0GTQ1 180 aa11.08□□□□□ -0.64
CPSF7-212ENST00000489728 POM121BA6NF01 834 aa11.08□□□□□ -0.64
CPSF7-212ENST00000489728 C4orf47A7E2U8 309 aa11.08□□□□□ -0.64
CPSF7-212ENST00000489728 PDE2AO00408 941 aaPredicted RBP11.08□□□□□ -0.64
CPSF7-212ENST00000489728 PMPCBO75439 489 aa11.08□□□□□ -0.64
CPSF7-212ENST00000489728 ATP1A1P05023 1023 aaKnown RBP11.08□□□□□ -0.64
CPSF7-212ENST00000489728 ALPIP09923 528 aa11.08□□□□□ -0.64
CPSF7-212ENST00000489728 CTPS1P17812 591 aa11.08□□□□□ -0.64
CPSF7-212ENST00000489728 GM2AP17900 193 aa11.08□□□□□ -0.64
CPSF7-212ENST00000489728 CXCR5P32302 372 aa11.08□□□□□ -0.64
CPSF7-212ENST00000489728 ACTN2P35609 894 aa11.08□□□□□ -0.64
CPSF7-212ENST00000489728 TRIM23P36406 574 aa11.08□□□□□ -0.64
CPSF7-212ENST00000489728 THOP1P52888 689 aa11.08□□□□□ -0.64
CPSF7-212ENST00000489728 CLDN2P57739 230 aa11.08□□□□□ -0.64
CPSF7-212ENST00000489728 KIAA1024LP59773 190 aa11.08□□□□□ -0.64
CPSF7-212ENST00000489728 DCDC1P59894 354 aa11.08□□□□□ -0.64
CPSF7-212ENST00000489728 GNG11P61952 73 aa11.08□□□□□ -0.64
CPSF7-212ENST00000489728 PTSQ03393 145 aa11.08□□□□□ -0.64
CPSF7-212ENST00000489728 PUM1Q14671 1186 aaKnown RBP eCLIP11.08□□□□□ -0.64
CPSF7-212ENST00000489728 SUZ12Q15022 739 aaKnown RBP11.08□□□□□ -0.64
CPSF7-212ENST00000489728 SLC1A5Q15758 541 aa11.08□□□□□ -0.64
CPSF7-212ENST00000489728 PCSK7Q16549 785 aa11.08□□□□□ -0.64
CPSF7-212ENST00000489728 CDKN3Q16667 212 aa11.08□□□□□ -0.64
CPSF7-212ENST00000489728 LAYNQ6UX15 382 aa11.08□□□□□ -0.64
CPSF7-212ENST00000489728 MACC1Q6ZN28 852 aa11.08□□□□□ -0.64
CPSF7-212ENST00000489728 DBX2Q6ZNG2 339 aa11.08□□□□□ -0.64
CPSF7-212ENST00000489728 Q6ZSR6 202 aa11.08□□□□□ -0.64
CPSF7-212ENST00000489728 TECPR1Q7Z6L1 1165 aa11.08□□□□□ -0.64
CPSF7-212ENST00000489728 PARGQ86W56 976 aa11.08□□□□□ -0.64
CPSF7-212ENST00000489728 SPATS2Q86XZ4 545 aaKnown RBP11.08□□□□□ -0.64
CPSF7-212ENST00000489728 CCDC110Q8TBZ0 833 aa11.08□□□□□ -0.64
CPSF7-212ENST00000489728 MRGPRX2Q96LB1 330 aa11.08□□□□□ -0.64
CPSF7-212ENST00000489728 MYOCQ99972 504 aa11.08□□□□□ -0.64
CPSF7-212ENST00000489728 C10orf88Q9H8K7 445 aa11.08□□□□□ -0.64
CPSF7-212ENST00000489728 TM7SF3Q9NS93 570 aa11.08□□□□□ -0.64
CPSF7-212ENST00000489728 ADAMTS9Q9P2N4 1935 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 CEP250Q9BV73 2442 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 DOCK9Q9BZ29 2069 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 GOLGA6L10A0A0M3HER8 536 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 C1orf232A0A0U1RR37 186 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 H0Y8X5 98 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 TM4SF5O14894 197 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 FLRT2O43155 660 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 PPFIA2O75334 1257 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 ATXN1LP0C7T5 689 aaKnown RBP11.07□□□□□ -0.64
CPSF7-212ENST00000489728 CSRP1P21291 193 aaKnown RBP11.07□□□□□ -0.64
CPSF7-212ENST00000489728 KELP23276 732 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 PSMB4P28070 264 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 HTR1BP28222 390 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 ADRA1AP35348 466 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 FDFT1P37268 417 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 GDF10P55107 478 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 GALNT3Q14435 633 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 NFATC4Q14934 902 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 CYP1B1Q16678 543 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 RSPO4Q2I0M5 234 aaPredicted RBP11.07□□□□□ -0.64
CPSF7-212ENST00000489728 HS1BP3Q53T59 392 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 SIRPB2Q5JXA9 342 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 ZDHHC20Q5W0Z9 365 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 PAPD7Q5XG87 772 aaKnown RBP11.07□□□□□ -0.64
CPSF7-212ENST00000489728 PNCKQ6P2M8 343 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 RANBP10Q6VN20 620 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 HSD11B1LQ7Z5J1 315 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 TSPAN33Q86UF1 283 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 SLC22A18ASQ8N1D0 253 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 CCDC89Q8N998 374 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 IPMKQ8NFU5 416 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 DTX3LQ8TDB6 740 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 BTN2A2Q8WVV5 523 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 C1orf54Q8WWF1 131 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 NAPGQ99747 312 aaPredicted RBP11.07□□□□□ -0.64
CPSF7-212ENST00000489728 GORASP1Q9BQQ3 440 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 WDR26Q9H7D7 661 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms