RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 PTPN5P54829 565 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 ATP6V0D1P61421 351 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 GBE1Q04446 702 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 SLC25A52Q3SY17 297 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 MFSD5Q6N075 450 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 RHBDF2Q6PJF5 856 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 DGCR14Q96DF8 476 aaKnown RBP17.62■□□□□ 0.41
NPHP4-209ENST00000489180 FNDC11Q9BVV2 318 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 MAT2BQ9NZL9 334 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 SYNPO2Q9UMS6 1093 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 GNEQ9Y223 722 aaKnown RBP17.62■□□□□ 0.41
NPHP4-209ENST00000489180 IQCMA0A1B0GVH7 501 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 H0Y858 1186 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 DNM1LO00429 736 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 IRF6O14896 467 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 ERAL1O75616 437 aaKnown RBP17.62■□□□□ 0.41
NPHP4-209ENST00000489180 MT-ND1P03886 318 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 BUD31P41223 144 aaPredicted RBP17.62■□□□□ 0.41
NPHP4-209ENST00000489180 BRCC3P46736 316 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 SLC20A2Q08357 652 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 PLPPR4Q7Z2D5 763 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 PAGE2Q7Z2X7 111 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 LDB1Q86U70 411 aaPredicted RBP17.62■□□□□ 0.41
NPHP4-209ENST00000489180 BSNDQ8WZ55 320 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 FADS3Q9Y5Q0 445 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 TBC1D3BA6NDS4 549 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 TM7SF2O76062 418 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 MMP8P22894 467 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 LACTB2Q53H82 288 aaPredicted RBP17.62■□□□□ 0.41
NPHP4-209ENST00000489180 HECTD2Q5U5R9 776 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 PTCHD4Q6ZW05 846 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 OR2T12Q8NG77 320 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 RRAGCQ9HB90 399 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 RASSF1Q9NS23 344 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 CORO2BQ9UQ03 480 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 PLOD3O60568 738 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 CDH3P22223 829 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 CLEC6AQ6EIG7 209 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 MON1BQ7L1V2 547 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 PPM1MQ96MI6 270 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 TIMM22Q9Y584 194 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 PCDHB9Q9Y5E1 797 aa17.62■□□□□ 0.41
NPHP4-209ENST00000489180 SUV39H1O43463 412 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 CST3P01034 146 aaPredicted RBP17.61■□□□□ 0.41
NPHP4-209ENST00000489180 IFNA16P05015 189 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 RPL4P36578 427 aaKnown RBP17.61■□□□□ 0.41
NPHP4-209ENST00000489180 MTHFRP42898 656 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 VPS26BQ4G0F5 336 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 IKBIPQ70UQ0 350 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 KRT74Q7RTS7 529 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 EEF1AKMT1Q8WVE0 214 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 DENND2DQ9H6A0 471 aaPredicted RBP17.61■□□□□ 0.41
NPHP4-209ENST00000489180 GPSM3Q9Y4H4 160 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 AMHP03971 560 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 DPYSQ14117 519 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 C9orf57Q5W0N0 161 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 ANKS1BQ7Z6G8 1248 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 RASAL3Q86YV0 1011 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 COLGALT2Q8IYK4 626 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 RNASE11Q8TAA1 199 aaKnown RBP17.61■□□□□ 0.41
NPHP4-209ENST00000489180 FAM81AQ8TBF8 368 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 S100ZQ8WXG8 99 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 UBE2E3Q969T4 207 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 UROC1Q96N76 676 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 GLOD4Q9HC38 313 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 TMEM138Q9NPI0 162 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 PCDHGA4Q9Y5G9 962 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 TFECO14948 347 aaPredicted RBP17.61■□□□□ 0.41
NPHP4-209ENST00000489180 ARF4P18085 180 aaPredicted RBP17.61■□□□□ 0.41
NPHP4-209ENST00000489180 CD52P31358 61 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 XIAPP98170 497 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 SWT1Q5T5J6 900 aaKnown RBP17.61■□□□□ 0.41
NPHP4-209ENST00000489180 BTN3A3O00478 584 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 LIN7AO14910 233 aaPredicted RBP17.61■□□□□ 0.41
NPHP4-209ENST00000489180 LCA5LO95447 670 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 RNASEH2BQ5TBB1 312 aaKnown RBP17.61■□□□□ 0.41
NPHP4-209ENST00000489180 POTEHQ6S545 545 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 RNF19BQ6ZMZ0 732 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 DENND6AQ8IWF6 608 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 PIH1D2Q8WWB5 315 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 BTBD9Q96Q07 612 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 ST3GAL5Q9UNP4 418 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 ITPKAP23677 461 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 RHAGQ02094 409 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 HTRA1Q92743 480 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 TSSK3Q96PN8 268 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 CORO1BQ9BR76 489 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 LHX5Q9H2C1 402 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 MAGEL2Q9UJ55 1249 aa17.61■□□□□ 0.41
NPHP4-209ENST00000489180 A0A088AWK7 358 aa17.6■□□□□ 0.41
NPHP4-209ENST00000489180 DPPA5A6NC42 116 aa17.6■□□□□ 0.41
NPHP4-209ENST00000489180 AGPSO00116 658 aa17.6■□□□□ 0.41
NPHP4-209ENST00000489180 ZNF10P21506 573 aaPredicted RBP17.6■□□□□ 0.41
NPHP4-209ENST00000489180 RCVRNP35243 200 aa17.6■□□□□ 0.41
NPHP4-209ENST00000489180 GRM5P41594 1212 aa17.6■□□□□ 0.41
NPHP4-209ENST00000489180 CDKN2BP42772 138 aa17.6■□□□□ 0.41
NPHP4-209ENST00000489180 MPP1Q00013 466 aa17.6■□□□□ 0.41
NPHP4-209ENST00000489180 PSMD5Q16401 504 aa17.6■□□□□ 0.41
NPHP4-209ENST00000489180 LRRC57Q8N9N7 239 aa17.6■□□□□ 0.41
NPHP4-209ENST00000489180 AHCYL2Q96HN2 611 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms