RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 RAB15P59190 212 aa16.2■□□□□ 0.18
USP48-210ENST00000489108 ILF3Q12906 894 aaKnown RBP eCLIP16.2■□□□□ 0.18
USP48-210ENST00000489108 GRM3Q14832 879 aa16.2■□□□□ 0.18
USP48-210ENST00000489108 TMEM71Q6P5X7 295 aa16.2■□□□□ 0.18
USP48-210ENST00000489108 SLC30A9Q6PML9 568 aa16.2■□□□□ 0.18
USP48-210ENST00000489108 NAGSQ8N159 534 aa16.2■□□□□ 0.18
USP48-210ENST00000489108 CCDC185Q8N715 623 aa16.2■□□□□ 0.18
USP48-210ENST00000489108 RTL3Q8N8U3 475 aaKnown RBP16.2■□□□□ 0.18
USP48-210ENST00000489108 RXFP2Q8WXD0 754 aa16.2■□□□□ 0.18
USP48-210ENST00000489108 EFHD1Q9BUP0 239 aa16.2■□□□□ 0.18
USP48-210ENST00000489108 ST14Q9Y5Y6 855 aa16.2■□□□□ 0.18
USP48-210ENST00000489108 SPENQ96T58 3664 aaKnown RBP16.2■□□□□ 0.18
USP48-210ENST00000489108 A8MU76 341 aa16.19■□□□□ 0.18
USP48-210ENST00000489108 PDE2AO00408 941 aaPredicted RBP16.19■□□□□ 0.18
USP48-210ENST00000489108 FGFR1OPO95684 399 aaKnown RBP16.19■□□□□ 0.18
USP48-210ENST00000489108 CEACAM5P06731 702 aa16.19■□□□□ 0.18
USP48-210ENST00000489108 ELFN1P0C7U0 828 aa16.19■□□□□ 0.18
USP48-210ENST00000489108 GNLYP22749 145 aa16.19■□□□□ 0.18
USP48-210ENST00000489108 YBEYP58557 167 aaPredicted RBP16.19■□□□□ 0.18
USP48-210ENST00000489108 FHL5Q5TD97 284 aa16.19■□□□□ 0.18
USP48-210ENST00000489108 SMYD5Q6GMV2 418 aa16.19■□□□□ 0.18
USP48-210ENST00000489108 KDELC2Q7Z4H8 507 aa16.19■□□□□ 0.18
USP48-210ENST00000489108 PYROXD2Q8N2H3 581 aa16.19■□□□□ 0.18
USP48-210ENST00000489108 GPT2Q8TD30 523 aa16.19■□□□□ 0.18
USP48-210ENST00000489108 PTCD2Q8WV60 388 aaKnown RBP16.19■□□□□ 0.18
USP48-210ENST00000489108 STARD8Q92502 1023 aa16.19■□□□□ 0.18
USP48-210ENST00000489108 TEFMQ96QE5 360 aaKnown RBP16.19■□□□□ 0.18
USP48-210ENST00000489108 DPYSL5Q9BPU6 564 aa16.19■□□□□ 0.18
USP48-210ENST00000489108 GTPBP10A4D1E9 387 aaKnown RBP16.18■□□□□ 0.18
USP48-210ENST00000489108 VPS4BO75351 444 aa16.18■□□□□ 0.18
USP48-210ENST00000489108 EPHB2P29323 1055 aa16.18■□□□□ 0.18
USP48-210ENST00000489108 GNPDA1P46926 289 aa16.18■□□□□ 0.18
USP48-210ENST00000489108 RGRP47804 291 aa16.18■□□□□ 0.18
USP48-210ENST00000489108 CTBSQ01459 385 aa16.18■□□□□ 0.18
USP48-210ENST00000489108 MC2RQ01718 297 aa16.18■□□□□ 0.18
USP48-210ENST00000489108 MC1RQ01726 317 aa16.18■□□□□ 0.18
USP48-210ENST00000489108 ABHD18Q0P651 414 aa16.18■□□□□ 0.18
USP48-210ENST00000489108 ACOX1Q15067 660 aa16.18■□□□□ 0.18
USP48-210ENST00000489108 SNAP47Q5SQN1 464 aa16.18■□□□□ 0.18
USP48-210ENST00000489108 NAA35Q5VZE5 725 aa16.18■□□□□ 0.18
USP48-210ENST00000489108 AFMIDQ63HM1 303 aa16.18■□□□□ 0.18
USP48-210ENST00000489108 CAPRIN2Q6IMN6 1127 aaKnown RBP16.18■□□□□ 0.18
USP48-210ENST00000489108 TRNAU1APQ9NX07 287 aaKnown RBP16.18■□□□□ 0.18
USP48-210ENST00000489108 PDP2Q9P2J9 529 aa16.18■□□□□ 0.18
USP48-210ENST00000489108 UBA2Q9UBT2 640 aaPredicted RBP16.18■□□□□ 0.18
USP48-210ENST00000489108 SUFUQ9UMX1 484 aa16.18■□□□□ 0.18
USP48-210ENST00000489108 VPS4AQ9UN37 437 aa16.18■□□□□ 0.18
USP48-210ENST00000489108 MRPS18BQ9Y676 258 aaKnown RBP16.18■□□□□ 0.18
USP48-210ENST00000489108 KCNMB2Q9Y691 235 aa16.18■□□□□ 0.18
USP48-210ENST00000489108 RP1L1Q8IWN7 2480 aaPredicted RBP16.17■□□□□ 0.18
USP48-210ENST00000489108 J3KR12 359 aa16.17■□□□□ 0.18
USP48-210ENST00000489108 MYCLP1P12525 358 aaPredicted RBP16.17■□□□□ 0.18
USP48-210ENST00000489108 SDC4P31431 198 aa16.17■□□□□ 0.18
USP48-210ENST00000489108 PPM1FP49593 454 aaPredicted RBP16.17■□□□□ 0.18
USP48-210ENST00000489108 HDAC4P56524 1084 aa16.17■□□□□ 0.18
USP48-210ENST00000489108 TCTN3Q6NUS6 607 aa16.17■□□□□ 0.18
USP48-210ENST00000489108 CEACAM20Q6UY09 585 aa16.17■□□□□ 0.18
USP48-210ENST00000489108 ASB18Q6ZVZ8 466 aa16.17■□□□□ 0.18
USP48-210ENST00000489108 STRADAQ7RTN6 431 aa16.17■□□□□ 0.18
USP48-210ENST00000489108 SRLQ86TD4 932 aa16.17■□□□□ 0.18
USP48-210ENST00000489108 ZNF761Q86XN6 746 aaPredicted RBP16.17■□□□□ 0.18
USP48-210ENST00000489108 ELOA2Q8IYF1 753 aaPredicted RBP16.17■□□□□ 0.18
USP48-210ENST00000489108 MSANTD4Q8NCY6 345 aa16.17■□□□□ 0.18
USP48-210ENST00000489108 JOSD2Q8TAC2 188 aa16.17■□□□□ 0.18
USP48-210ENST00000489108 SSC4DQ8WTU2 575 aa16.17■□□□□ 0.18
USP48-210ENST00000489108 TUBGCP5Q96RT8 1024 aa16.17■□□□□ 0.18
USP48-210ENST00000489108 APMAPQ9HDC9 416 aa16.17■□□□□ 0.18
USP48-210ENST00000489108 PRDM8Q9NQV8 689 aa16.17■□□□□ 0.18
USP48-210ENST00000489108 PHPT1Q9NRX4 125 aaPredicted RBP16.17■□□□□ 0.18
USP48-210ENST00000489108 PLEKHM1Q9Y4G2 1056 aa16.17■□□□□ 0.18
USP48-210ENST00000489108 KCTD3Q9Y597 815 aa16.17■□□□□ 0.18
USP48-210ENST00000489108 TRBV23OR9-2A0A075B6M9 112 aa16.16■□□□□ 0.18
USP48-210ENST00000489108 C2CD4BA6NLJ0 364 aa16.16■□□□□ 0.18
USP48-210ENST00000489108 STK17BO94768 372 aa16.16■□□□□ 0.18
USP48-210ENST00000489108 LSM8O95777 96 aaKnown RBP16.16■□□□□ 0.18
USP48-210ENST00000489108 F8A1P23610 371 aa16.16■□□□□ 0.18
USP48-210ENST00000489108 ADCY8P40145 1251 aa16.16■□□□□ 0.18
USP48-210ENST00000489108 POLD2P49005 469 aa16.16■□□□□ 0.18
USP48-210ENST00000489108 NOMO3P69849 1222 aa16.16■□□□□ 0.18
USP48-210ENST00000489108 RAPGEF1Q13905 1077 aa16.16■□□□□ 0.18
USP48-210ENST00000489108 PARP15Q460N3 678 aa16.16■□□□□ 0.18
USP48-210ENST00000489108 CRTC2Q53ET0 693 aaPredicted RBP16.16■□□□□ 0.18
USP48-210ENST00000489108 DPY19L2P1Q6NXN4 242 aa16.16■□□□□ 0.18
USP48-210ENST00000489108 DPPA4Q7L190 304 aa16.16■□□□□ 0.18
USP48-210ENST00000489108 NOP9Q86U38 636 aaKnown RBP16.16■□□□□ 0.18
USP48-210ENST00000489108 HEATR4Q86WZ0 1026 aa16.16■□□□□ 0.18
USP48-210ENST00000489108 CCDC13Q8IYE1 715 aa16.16■□□□□ 0.18
USP48-210ENST00000489108 FAM172AQ8WUF8 416 aa16.16■□□□□ 0.18
USP48-210ENST00000489108 CENPIQ92674 756 aaPredicted RBP16.16■□□□□ 0.18
USP48-210ENST00000489108 ECHDC3Q96DC8 303 aa16.16■□□□□ 0.18
USP48-210ENST00000489108 AHCYL2Q96HN2 611 aaKnown RBP16.16■□□□□ 0.18
USP48-210ENST00000489108 TEX101Q9BY14 249 aa16.16■□□□□ 0.18
USP48-210ENST00000489108 FRMD8Q9BZ67 464 aaPredicted RBP16.16■□□□□ 0.18
USP48-210ENST00000489108 ZMYND15Q9H091 742 aa16.16■□□□□ 0.18
USP48-210ENST00000489108 TRIT1Q9H3H1 467 aaKnown RBP16.16■□□□□ 0.18
USP48-210ENST00000489108 ATP13A3Q9H7F0 1226 aa16.16■□□□□ 0.18
USP48-210ENST00000489108 PDFQ9HBH1 243 aa16.16■□□□□ 0.18
USP48-210ENST00000489108 FBXO8Q9NRD0 319 aa16.16■□□□□ 0.18
USP48-210ENST00000489108 TMEM184BQ9Y519 407 aaPredicted RBP16.16■□□□□ 0.18
USP48-210ENST00000489108 A1L4Q6 167 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms