RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 ATOH1Q92858 354 aaPredicted RBP10.32□□□□□ -0.76
SKA1-204ENST00000488454 GORASP1Q9BQQ3 440 aa10.32□□□□□ -0.76
SKA1-204ENST00000488454 ARHGAP9Q9BRR9 750 aa10.32□□□□□ -0.76
SKA1-204ENST00000488454 ERP44Q9BS26 406 aa10.32□□□□□ -0.76
SKA1-204ENST00000488454 WRAP53Q9BUR4 548 aaKnown RBP10.32□□□□□ -0.76
SKA1-204ENST00000488454 C1QTNF7Q9BXJ2 289 aa10.32□□□□□ -0.76
SKA1-204ENST00000488454 GPR63Q9BZJ6 419 aa10.32□□□□□ -0.76
SKA1-204ENST00000488454 TRIM31Q9BZY9 425 aa10.32□□□□□ -0.76
SKA1-204ENST00000488454 TRABDQ9H4I3 376 aa10.32□□□□□ -0.76
SKA1-204ENST00000488454 ARNT2Q9HBZ2 717 aa10.32□□□□□ -0.76
SKA1-204ENST00000488454 MAGEE1Q9HCI5 957 aa10.32□□□□□ -0.76
SKA1-204ENST00000488454 HACD3Q9P035 362 aa10.32□□□□□ -0.76
SKA1-204ENST00000488454 B4GALT6Q9UBX8 382 aa10.32□□□□□ -0.76
SKA1-204ENST00000488454 MBD1Q9UIS9 605 aaPredicted RBP10.32□□□□□ -0.76
SKA1-204ENST00000488454 ITM2BQ9Y287 266 aa10.32□□□□□ -0.76
SKA1-204ENST00000488454 HCN4Q9Y3Q4 1203 aa10.32□□□□□ -0.76
SKA1-204ENST00000488454 CKAP5Q14008 2032 aa10.32□□□□□ -0.76
SKA1-204ENST00000488454 C1orf232A0A0U1RR37 186 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 IGLON5A6NGN9 336 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 CAPN8A6NHC0 703 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 C2orf81A6NN90 581 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 METTL12A8MUP2 240 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 MEI4A8MW99 385 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 DNALI1O14645 258 aaPredicted RBP10.31□□□□□ -0.76
SKA1-204ENST00000488454 CRTAMO95727 393 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 ATXN1LP0C7T5 689 aaKnown RBP10.31□□□□□ -0.76
SKA1-204ENST00000488454 ZNF30P17039 623 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 TPSB2P20231 275 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 BCKDHBP21953 392 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 MAT2AP31153 395 aaKnown RBP10.31□□□□□ -0.76
SKA1-204ENST00000488454 NUDT1P36639 197 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 MMP12P39900 470 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 CHRNA4P43681 627 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 DHPSP49366 369 aaPredicted RBP10.31□□□□□ -0.76
SKA1-204ENST00000488454 MRPS25P82663 173 aaKnown RBP10.31□□□□□ -0.76
SKA1-204ENST00000488454 CDH17Q12864 832 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 CALCOCO2Q13137 446 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 ACOX1Q15067 660 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 TPSAB1Q15661 275 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 KCTD19Q17RG1 926 aaPredicted RBP10.31□□□□□ -0.76
SKA1-204ENST00000488454 WDR45BQ5MNZ6 344 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 IZUMO3Q5VZ72 239 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 DENND2CQ68D51 928 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 CRTC1Q6UUV9 634 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 TRIM69Q86WT6 500 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 RGL4Q8IZJ4 473 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 OR52K1Q8NGK4 314 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 BLOC1S5Q8TDH9 187 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 SNX19Q92543 992 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 SNF8Q96H20 258 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 MCCC1Q96RQ3 725 aaPredicted RBP10.31□□□□□ -0.76
SKA1-204ENST00000488454 OCSTAMPQ9BR26 566 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 TRIM51Q9BSJ1 452 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 LRRC1Q9BTT6 524 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 SLC17A9Q9BYT1 436 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 DUSP15Q9H1R2 295 aaPredicted RBP10.31□□□□□ -0.76
SKA1-204ENST00000488454 C6orf106Q9H6K1 298 aaPredicted RBP10.31□□□□□ -0.76
SKA1-204ENST00000488454 L2HGDHQ9H9P8 463 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 ZFYVE1Q9HBF4 777 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 KCTD5Q9NXV2 234 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 BFARQ9NZS9 450 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 ANAPC5Q9UJX4 755 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 SNX24Q9Y343 169 aa10.31□□□□□ -0.76
SKA1-204ENST00000488454 CACNA1IQ9P0X4 2223 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 NPIPB15A6NHN6 443 aaPredicted RBP10.3□□□□□ -0.76
SKA1-204ENST00000488454 PSMD11O00231 422 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 WNT9AO14904 365 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 SLC31A1O15431 190 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 LILRB5O75023 590 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 HEXIM1O94992 359 aaKnown RBP10.3□□□□□ -0.76
SKA1-204ENST00000488454 CLDN7O95471 211 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 PAK4O96013 591 aaPredicted RBP10.3□□□□□ -0.76
SKA1-204ENST00000488454 PIRTP0C851 137 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 TPH1P17752 444 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 MAGEA6P43360 314 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 NPY2RP49146 381 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 SESN2P58004 480 aaPredicted RBP10.3□□□□□ -0.76
SKA1-204ENST00000488454 TUBB4BP68371 445 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 PDE1BQ01064 536 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 SLC7A5Q01650 507 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 OLIG2Q13516 323 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 PTPRRQ15256 657 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 PLK5Q496M5 336 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 SETMARQ53H47 684 aaPredicted RBP10.3□□□□□ -0.76
SKA1-204ENST00000488454 LYSMD4Q5XG99 296 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 SEL1L3Q68CR1 1132 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 LRRC66Q68CR7 880 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 DENND5AQ6IQ26 1287 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 LRRC8BQ6P9F7 803 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 LIPIQ6XZB0 460 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 GLT6D1Q7Z4J2 308 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 HOOK3Q86VS8 718 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 MCUQ8NE86 351 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 PRSS33Q8NF86 280 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 BRSK1Q8TDC3 778 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 CPT1BQ92523 772 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 KLK6Q92876 244 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 BIRC7Q96CA5 298 aa10.3□□□□□ -0.76
SKA1-204ENST00000488454 ZC3H10Q96K80 434 aaKnown RBP10.3□□□□□ -0.76
SKA1-204ENST00000488454 HSPA12BQ96MM6 686 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms