RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 PELI3Q8N2H9 469 aa16.02■□□□□ 0.16
ERGIC3-216ENST00000488384 PLA2G15Q8NCC3 412 aa16.02■□□□□ 0.16
ERGIC3-216ENST00000488384 SLC35B2Q8TB61 432 aa16.02■□□□□ 0.16
ERGIC3-216ENST00000488384 BAHD1Q8TBE0 780 aaPredicted RBP16.02■□□□□ 0.16
ERGIC3-216ENST00000488384 NUS1Q96E22 293 aa16.02■□□□□ 0.16
ERGIC3-216ENST00000488384 DTD2Q96FN9 168 aa16.02■□□□□ 0.16
ERGIC3-216ENST00000488384 FCRL5Q96RD9 977 aa16.02■□□□□ 0.16
ERGIC3-216ENST00000488384 GORASP1Q9BQQ3 440 aa16.02■□□□□ 0.16
ERGIC3-216ENST00000488384 GBA3Q9H227 469 aa16.02■□□□□ 0.16
ERGIC3-216ENST00000488384 UBP1Q9NZI7 540 aa16.02■□□□□ 0.16
ERGIC3-216ENST00000488384 RSPH14Q9UHP6 348 aa16.02■□□□□ 0.16
ERGIC3-216ENST00000488384 TRHDEQ9UKU6 1024 aa16.02■□□□□ 0.16
ERGIC3-216ENST00000488384 PCOLCE2Q9UKZ9 415 aa16.02■□□□□ 0.16
ERGIC3-216ENST00000488384 BTBD3Q9Y2F9 522 aa16.02■□□□□ 0.16
ERGIC3-216ENST00000488384 ANKRD66B4E2M5 251 aa16.01■□□□□ 0.15
ERGIC3-216ENST00000488384 K7ESM1 405 aa16.01■□□□□ 0.15
ERGIC3-216ENST00000488384 TOR1BO14657 336 aa16.01■□□□□ 0.15
ERGIC3-216ENST00000488384 KCNN4O15554 427 aa16.01■□□□□ 0.15
ERGIC3-216ENST00000488384 SDC3O75056 442 aa16.01■□□□□ 0.15
ERGIC3-216ENST00000488384 CBFA2T3O75081 653 aa16.01■□□□□ 0.15
ERGIC3-216ENST00000488384 NME1P15531 152 aaKnown RBP16.01■□□□□ 0.15
ERGIC3-216ENST00000488384 ZNF30P17039 623 aa16.01■□□□□ 0.15
ERGIC3-216ENST00000488384 STC1P52823 247 aa16.01■□□□□ 0.15
ERGIC3-216ENST00000488384 WNT3AP56704 352 aa16.01■□□□□ 0.15
ERGIC3-216ENST00000488384 YPEL5P62699 121 aa16.01■□□□□ 0.15
ERGIC3-216ENST00000488384 CDK18Q07002 472 aa16.01■□□□□ 0.15
ERGIC3-216ENST00000488384 MTM1Q13496 603 aa16.01■□□□□ 0.15
ERGIC3-216ENST00000488384 INPP5AQ14642 412 aa16.01■□□□□ 0.15
ERGIC3-216ENST00000488384 CDKN3Q16667 212 aa16.01■□□□□ 0.15
ERGIC3-216ENST00000488384 ESRP1Q6NXG1 681 aaKnown RBP16.01■□□□□ 0.15
ERGIC3-216ENST00000488384 MACC1Q6ZN28 852 aa16.01■□□□□ 0.15
ERGIC3-216ENST00000488384 RFLNAQ6ZTI6 216 aa16.01■□□□□ 0.15
ERGIC3-216ENST00000488384 Q6ZVL8 140 aa16.01■□□□□ 0.15
ERGIC3-216ENST00000488384 KDELC2Q7Z4H8 507 aa16.01■□□□□ 0.15
ERGIC3-216ENST00000488384 TECPR1Q7Z6L1 1165 aa16.01■□□□□ 0.15
ERGIC3-216ENST00000488384 ATG4AQ8WYN0 398 aa16.01■□□□□ 0.15
ERGIC3-216ENST00000488384 IFT43Q96FT9 208 aa16.01■□□□□ 0.15
ERGIC3-216ENST00000488384 SPATA13Q96N96 652 aa16.01■□□□□ 0.15
ERGIC3-216ENST00000488384 ADGRE3Q9BY15 652 aa16.01■□□□□ 0.15
ERGIC3-216ENST00000488384 SLC32A1Q9H598 525 aa16.01■□□□□ 0.15
ERGIC3-216ENST00000488384 USP29Q9HBJ7 922 aa16.01■□□□□ 0.15
ERGIC3-216ENST00000488384 FAM153AQ9UHL3 310 aa16.01■□□□□ 0.15
ERGIC3-216ENST00000488384 DNPEPQ9ULA0 475 aa16.01■□□□□ 0.15
ERGIC3-216ENST00000488384 PNMA8BQ9ULN7 279 aaPredicted RBP16.01■□□□□ 0.15
ERGIC3-216ENST00000488384 LRP4O75096 1905 aa16■□□□□ 0.15
ERGIC3-216ENST00000488384 NDST3O95803 873 aa16■□□□□ 0.15
ERGIC3-216ENST00000488384 CEACAM1P13688 526 aa16■□□□□ 0.15
ERGIC3-216ENST00000488384 GRK6P43250 576 aa16■□□□□ 0.15
ERGIC3-216ENST00000488384 THOP1P52888 689 aa16■□□□□ 0.15
ERGIC3-216ENST00000488384 PTSQ03393 145 aa16■□□□□ 0.15
ERGIC3-216ENST00000488384 BNIP3Q12983 259 aa16■□□□□ 0.15
ERGIC3-216ENST00000488384 EIF2B5Q13144 721 aaKnown RBP16■□□□□ 0.15
ERGIC3-216ENST00000488384 NFATC4Q14934 902 aa16■□□□□ 0.15
ERGIC3-216ENST00000488384 SUZ12Q15022 739 aaKnown RBP16■□□□□ 0.15
ERGIC3-216ENST00000488384 ZNF542PQ5EBM4 170 aa16■□□□□ 0.15
ERGIC3-216ENST00000488384 ANKRD20A2Q5SQ80 823 aa16■□□□□ 0.15
ERGIC3-216ENST00000488384 ANKRD20A1Q5TYW2 823 aa16■□□□□ 0.15
ERGIC3-216ENST00000488384 ANKRD20A3Q5VUR7 823 aa16■□□□□ 0.15
ERGIC3-216ENST00000488384 ITPRIPL1Q6GPH6 555 aa16■□□□□ 0.15
ERGIC3-216ENST00000488384 CCDC110Q8TBZ0 833 aa16■□□□□ 0.15
ERGIC3-216ENST00000488384 SETD7Q8WTS6 366 aaKnown RBP16■□□□□ 0.15
ERGIC3-216ENST00000488384 MRGPRX2Q96LB1 330 aa16■□□□□ 0.15
ERGIC3-216ENST00000488384 FERMT1Q9BQL6 677 aa16■□□□□ 0.15
ERGIC3-216ENST00000488384 APOOQ9BUR5 198 aa16■□□□□ 0.15
ERGIC3-216ENST00000488384 MLPHQ9BV36 600 aaPredicted RBP16■□□□□ 0.15
ERGIC3-216ENST00000488384 DNAJC28Q9NX36 388 aa16■□□□□ 0.15
ERGIC3-216ENST00000488384 KLF15Q9UIH9 416 aa16■□□□□ 0.15
ERGIC3-216ENST00000488384 OR1A2Q9Y585 309 aa16■□□□□ 0.15
ERGIC3-216ENST00000488384 USP24Q9UPU5 2620 aa16■□□□□ 0.15
ERGIC3-216ENST00000488384 COL5A1P20908 1838 aaPredicted RBP15.99■□□□□ 0.15
ERGIC3-216ENST00000488384 C1orf232A0A0U1RR37 186 aa15.99■□□□□ 0.15
ERGIC3-216ENST00000488384 ZSCAN12O43309 604 aa15.99■□□□□ 0.15
ERGIC3-216ENST00000488384 ZNF189O75820 626 aaPredicted RBP15.99■□□□□ 0.15
ERGIC3-216ENST00000488384 PIAS2O75928 621 aa15.99■□□□□ 0.15
ERGIC3-216ENST00000488384 STK10O94804 968 aaKnown RBP15.99■□□□□ 0.15
ERGIC3-216ENST00000488384 CLDN7O95471 211 aa15.99■□□□□ 0.15
ERGIC3-216ENST00000488384 CSF2P04141 144 aa15.99■□□□□ 0.15
ERGIC3-216ENST00000488384 ITGAVP06756 1048 aa15.99■□□□□ 0.15
ERGIC3-216ENST00000488384 ATXN1LP0C7T5 689 aaKnown RBP15.99■□□□□ 0.15
ERGIC3-216ENST00000488384 PIRTP0C851 137 aa15.99■□□□□ 0.15
ERGIC3-216ENST00000488384 PSMB4P28070 264 aa15.99■□□□□ 0.15
ERGIC3-216ENST00000488384 PMLP29590 882 aa15.99■□□□□ 0.15
ERGIC3-216ENST00000488384 GDF10P55107 478 aa15.99■□□□□ 0.15
ERGIC3-216ENST00000488384 MPP3Q13368 585 aa15.99■□□□□ 0.15
ERGIC3-216ENST00000488384 PTK2BQ14289 1009 aa15.99■□□□□ 0.15
ERGIC3-216ENST00000488384 SIX1Q15475 284 aaPredicted RBP15.99■□□□□ 0.15
ERGIC3-216ENST00000488384 INAVAQ3KP66 663 aa15.99■□□□□ 0.15
ERGIC3-216ENST00000488384 N4BP2L1Q5TBK1 243 aaPredicted RBP15.99■□□□□ 0.15
ERGIC3-216ENST00000488384 PNCKQ6P2M8 343 aa15.99■□□□□ 0.15
ERGIC3-216ENST00000488384 NYAP1Q6ZVC0 841 aa15.99■□□□□ 0.15
ERGIC3-216ENST00000488384 LYSMD3Q7Z3D4 306 aa15.99■□□□□ 0.15
ERGIC3-216ENST00000488384 FAM71DQ8N9W8 422 aa15.99■□□□□ 0.15
ERGIC3-216ENST00000488384 IPMKQ8NFU5 416 aa15.99■□□□□ 0.15
ERGIC3-216ENST00000488384 FUBP1Q96AE4 644 aaKnown RBP15.99■□□□□ 0.15
ERGIC3-216ENST00000488384 UCKL1Q9NWZ5 548 aa15.99■□□□□ 0.15
ERGIC3-216ENST00000488384 KCTD5Q9NXV2 234 aa15.99■□□□□ 0.15
ERGIC3-216ENST00000488384 CD84Q9UIB8 345 aa15.99■□□□□ 0.15
ERGIC3-216ENST00000488384 PCNX2A6NKB5 2137 aa15.98■□□□□ 0.15
ERGIC3-216ENST00000488384 SPAARA0A1B0GVQ0 90 aa15.98■□□□□ 0.15
ERGIC3-216ENST00000488384 LOC285095A0A1B0GVY8 99 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms