RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 KLHDC8BQ8IXV7 354 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 NDUFAF2Q8N183 169 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 TP53I13Q8NBR0 393 aaPredicted RBP11.06□□□□□ -0.64
UBE4B-210ENST00000488228 BLOC1S5Q8TDH9 187 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 NUS1Q96E22 293 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 COQ10AQ96MF6 247 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 LYSMD1Q96S90 227 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 KLF6Q99612 283 aaPredicted RBP11.06□□□□□ -0.64
UBE4B-210ENST00000488228 LRRC40Q9H9A6 602 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 ETNK1Q9HBU6 452 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 CAPN10Q9HC96 672 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 MBNL1Q9NR56 388 aaKnown RBP11.06□□□□□ -0.64
UBE4B-210ENST00000488228 SEMA4GQ9NTN9 838 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 PAK5Q9P286 719 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 CD84Q9UIB8 345 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 TPX2Q9ULW0 747 aaKnown RBP11.06□□□□□ -0.64
UBE4B-210ENST00000488228 AAR2Q9Y312 384 aaKnown RBP11.06□□□□□ -0.64
UBE4B-210ENST00000488228 DMXL1Q9Y485 3027 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 CABIN1Q9Y6J0 2220 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 BPTFQ12830 3046 aa11.06□□□□□ -0.64
UBE4B-210ENST00000488228 A0A1W2PR77 199 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 GOLGA6CA6NDK9 693 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 GOLGA6BA6NDN3 693 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 POM121BA6NF01 834 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 E7EVH7 732 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 K7ESM1 405 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 ECEL1O95672 775 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 AP2A1O95782 977 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 KRT14P02533 472 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 GOLGA6DP0CG33 693 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 ZNF30P17039 623 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 TGM1P22735 817 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 CD38P28907 300 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 FDFT1P37268 417 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 IRX4P78413 519 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 BASP1P80723 227 aaKnown RBP11.05□□□□□ -0.64
UBE4B-210ENST00000488228 BNC1Q01954 994 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 C2orf54Q08AI8 447 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 GPS1Q13098 491 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 SEMA5AQ13591 1074 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 CDKN3Q16667 212 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 DUOXA1Q1HG43 343 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 WSCD2Q2TBF2 565 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 TPRG1LQ5T0D9 272 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 CCDC70Q6NSX1 233 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 PRR23CQ6ZRP0 262 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 Q6ZVL8 140 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 RABEPKQ7Z6M1 372 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 SLC22A18ASQ8N1D0 253 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 PELI3Q8N2H9 469 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 PLA2G15Q8NCC3 412 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 DENND6BQ8NEG7 585 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 OR13H1Q8NG92 308 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 OR2I1PQ8NGU4 316 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 ATL2Q8NHH9 583 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 DTD2Q96FN9 168 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 PPP1R2P1Q96PQ5 205 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 C1QTNF7Q9BXJ2 289 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 RXFP3Q9NSD7 469 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 GOLGA6AQ9NYA3 693 aa11.05□□□□□ -0.64
UBE4B-210ENST00000488228 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.05□□□□□ -0.64
UBE4B-210ENST00000488228 SPTBN4Q9H254 2564 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 A6NNZ2 444 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 PSMD11O00231 422 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 FPGTO14772 594 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 KHNYNO15037 678 aaKnown RBP11.04□□□□□ -0.64
UBE4B-210ENST00000488228 BUD23O43709 281 aaKnown RBP11.04□□□□□ -0.64
UBE4B-210ENST00000488228 LRP3O75074 770 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 URI1O94763 535 aaPredicted RBP11.04□□□□□ -0.64
UBE4B-210ENST00000488228 GAS8O95995 478 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 EPOP01588 193 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 APRTP07741 180 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 ZNF806P0C7X5 589 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 THEGLP0DJG4 465 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 ENGP17813 658 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 GRIA1P42261 906 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 PAFAH1B1P43034 410 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 LMAN1P49257 510 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 MRPS25P82663 173 aaKnown RBP11.04□□□□□ -0.64
UBE4B-210ENST00000488228 PTSQ03393 145 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 STAT4Q14765 748 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 LRRC14Q15048 493 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 PPP1R7Q15435 360 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 TEAD4Q15561 434 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 CSRP2Q16527 193 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 KIF19Q2TAC6 998 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 ALS2CLQ60I27 953 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 DENND5AQ6IQ26 1287 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 SLC23A3Q6PIS1 610 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 RANBP10Q6VN20 620 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 KYAT3Q6YP21 454 aaKnown RBP11.04□□□□□ -0.64
UBE4B-210ENST00000488228 GLT6D1Q7Z4J2 308 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 ABI3BPQ7Z7G0 1075 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 TTC30BQ8N4P2 665 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 CEP76Q8TAP6 659 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 GRK7Q8WTQ7 553 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 ASB12Q8WXK4 309 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 SCAMP4Q969E2 229 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 CENPTQ96BT3 561 aa11.04□□□□□ -0.64
UBE4B-210ENST00000488228 EID2BQ96D98 161 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms