RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 ACAA1P09110 424 aaPredicted RBP3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 FAM90A13PP0C7W8 464 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 FAM90A24PP0C7X0 464 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 IL7RP16871 459 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 TNNT2P45379 298 aaPredicted RBP3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 PIP4K2AP48426 406 aaPredicted RBP3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 MMP14P50281 582 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 TRAF2Q12933 501 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 NAE1Q13564 534 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 HLFQ16534 295 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 SGO1Q5FBB7 561 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 ITPRIPL1Q6GPH6 555 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 PDXDC1Q6P996 788 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 CCDC129Q6ZRS4 1044 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 LINGO2Q7L985 606 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 PXKQ7Z7A4 578 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 ZC3HC1Q86WB0 502 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 CCDC13Q8IYE1 715 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 FRMD1Q8N878 549 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 GPATCH11Q8N954 259 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 TMEM116Q8NCL8 245 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 AGBL3Q8NEM8 1001 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 B4GALNT2Q8NHY0 566 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 PSPC1Q8WXF1 523 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 LRFN5Q96NI6 719 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 CHCHD6Q9BRQ6 235 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 ZPBPQ9BS86 351 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 SLC25A33Q9BSK2 321 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 WACQ9BTA9 647 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 FBRSL1Q9HCM7 1045 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 GPR108Q9NPR9 543 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 EHD2Q9NZN4 543 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 CDC14AQ9UNH5 594 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 ERVK-11Q9UQG0 969 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 NUDCQ9Y266 331 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 PSAT1Q9Y617 370 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 MAP3K1Q13233 1512 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 EVPLQ92817 2033 aa3.94□□□□□ -1.78
ECHDC1-217ENST00000488087 FAM237BA0A1B0GVD1 139 aa3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 AKR1B15C9JRZ8 316 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 PAGE4O60829 102 aa3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 GLUD1P00367 558 aa3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 NGFRP08138 427 aa3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 G6PDP11413 515 aa3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 LAMP2P13473 410 aa3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 CDH2P19022 906 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 GLUD2P49448 558 aa3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 F2RL1P55085 397 aa3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 EGR4Q05215 589 aa3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 MED22Q15528 200 aa3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 EFHC1Q5JVL4 640 aa3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 HIST2H2BCQ6DN03 193 aa3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 HIST2H2BDQ6DRA6 164 aa3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 C8orf82Q6P1X6 216 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 C16orf54Q6UWD8 224 aa3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 B3GNT6Q6ZMB0 384 aa3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 QSOX2Q6ZRP7 698 aa3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 BRINP3Q76B58 766 aa3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 FASTKD5Q7L8L6 764 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 HAPLN4Q86UW8 402 aa3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 RPAP2Q8IXW5 612 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 DSELQ8IZU8 1212 aa3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 IQCF1Q8N6M8 205 aa3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 FAM216AQ8WUB2 273 aa3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 NEUROG1Q92886 237 aa3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 SLITRK1Q96PX8 696 aa3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 KXD1Q9BQD3 176 aa3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 IFIH1Q9BYX4 1025 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 NDST4Q9H3R1 872 aa3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 MUC13Q9H3R2 512 aa3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 EIF2B3Q9NR50 452 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 NSMCE4AQ9NXX6 385 aa3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 DLGAP2Q9P1A6 1054 aa3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 WNT16Q9UBV4 365 aa3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 AGO1Q9UL18 857 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 LYVE1Q9Y5Y7 322 aa3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 STON1Q9Y6Q2 735 aa3.93□□□□□ -1.78
ECHDC1-217ENST00000488087 CCDC88BA6NC98 1476 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 ABCA5Q8WWZ7 1642 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 A0A1W2PRG0 241 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 hDV102S1A0JD36 115 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 K7ENM7 598 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 GTPBP1O00178 669 aaKnown RBP3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 NKX2-2O95096 273 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 IPO7O95373 1038 aaKnown RBP3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 CYC1P08574 325 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 T-ENOLP0DO92 83 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 ZNF182P17025 639 aaPredicted RBP3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 ITGB8P26012 769 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 STX2P32856 288 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 PPARGP37231 505 aaPredicted RBP3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 EIF2S3P41091 472 aaKnown RBP3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 DRG2P55039 364 aaKnown RBP3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 CEBPZQ03701 1054 aaKnown RBP3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 CSTF3Q12996 717 aaKnown RBP3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 OLIG2Q13516 323 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 C2orf68Q2NKX9 166 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 SLC45A4Q5BKX6 768 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 C6orf141Q5SZD1 244 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 GPATCH4Q5T3I0 446 aaKnown RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms