RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 PNPLA1Q8N8W4 532 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 OR2A12Q8NGT7 310 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 MYLIPQ8WY64 445 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 LYSMD1Q96S90 227 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 OMDQ99983 421 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 C1QTNF1Q9BXJ1 281 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 CATSPERZQ9NTU4 200 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 ANKRD6Q9Y2G4 727 aa9.45□□□□□ -0.9
SF3B1-211ENST00000487698 WDR91A4D1P6 747 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 PHGDHO43175 533 aaKnown RBP9.44□□□□□ -0.9
SF3B1-211ENST00000487698 SNX3O60493 162 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 EDF1O60869 148 aaKnown RBP9.44□□□□□ -0.9
SF3B1-211ENST00000487698 POP4O95707 220 aaKnown RBP9.44□□□□□ -0.9
SF3B1-211ENST00000487698 ASLP04424 464 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 BPGMP07738 259 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 SRPRAP08240 638 aaKnown RBP9.44□□□□□ -0.9
SF3B1-211ENST00000487698 CTPS1P17812 591 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 TAS2R39P59534 338 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 RAB10P61026 200 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 MESP2Q0VG99 397 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 CTC1Q2NKJ3 1217 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 ACCSLQ4AC99 568 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 C16orf46Q6P387 395 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 CENPLQ8N0S6 344 aaPredicted RBP9.44□□□□□ -0.9
SF3B1-211ENST00000487698 RYBPQ8N488 228 aaPredicted RBP9.44□□□□□ -0.9
SF3B1-211ENST00000487698 OTUD6BQ8N6M0 293 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 CYB5D2Q8WUJ1 264 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 SORCS1Q8WY21 1168 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 E2F7Q96AV8 911 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 SEC16BQ96JE7 1060 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 ELMO2Q96JJ3 720 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 ZNF641Q96N77 438 aaPredicted RBP9.44□□□□□ -0.9
SF3B1-211ENST00000487698 MCCC1Q96RQ3 725 aaPredicted RBP9.44□□□□□ -0.9
SF3B1-211ENST00000487698 MYADMQ96S97 322 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 MECRQ9BV79 373 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 ZNF576Q9H609 170 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 MANSC1Q9H8J5 431 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 ECT2Q9H8V3 914 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 ZFP14Q9HCL3 533 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 SLCO1B3Q9NPD5 702 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 ZNF358Q9NW07 568 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 LMCD1Q9NZU5 365 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 TMEM216Q9P0N5 145 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 FKBPLQ9UIM3 349 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 CORO1CQ9ULV4 474 aaPredicted RBP9.44□□□□□ -0.9
SF3B1-211ENST00000487698 PPIL1Q9Y3C6 166 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 A0A0U1RQS6 177 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 STX7O15400 261 aaKnown RBP9.44□□□□□ -0.9
SF3B1-211ENST00000487698 WISP3O95389 354 aaPredicted RBP9.44□□□□□ -0.9
SF3B1-211ENST00000487698 IL1BP01584 269 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 SLC4A1P02730 911 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 DLDP09622 509 aaKnown RBP9.44□□□□□ -0.9
SF3B1-211ENST00000487698 COL6A2P12110 1019 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 STMN1P16949 149 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 CRABP2P29373 138 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 PGGT1BP53609 377 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 XIAPP98170 497 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 DLX2Q07687 328 aaPredicted RBP9.44□□□□□ -0.9
SF3B1-211ENST00000487698 PEX6Q13608 980 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 PCLAFQ15004 111 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 CCDC153Q494R4 210 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 TAF1BQ53T94 588 aaPredicted RBP9.44□□□□□ -0.9
SF3B1-211ENST00000487698 ATAT1Q5SQI0 421 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 FAM47EQ6ZV65 393 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 PHTF2Q8N3S3 785 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 GPATCH11Q8N954 259 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 CHST14Q8NCH0 376 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 RAB3IL1Q8TBN0 382 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 NDNQ99608 321 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 OLFM1Q99784 485 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 SUV39H2Q9H5I1 410 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 ZDHHC6Q9H6R6 413 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 INTS10Q9NVR2 710 aaKnown RBP9.44□□□□□ -0.9
SF3B1-211ENST00000487698 THG1LQ9NWX6 298 aaKnown RBP9.44□□□□□ -0.9
SF3B1-211ENST00000487698 STARD13Q9Y3M8 1113 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 WASF2Q9Y6W5 498 aa9.44□□□□□ -0.9
SF3B1-211ENST00000487698 PLXNA2O75051 1894 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 NPIPB15A6NHN6 443 aaPredicted RBP9.43□□□□□ -0.9
SF3B1-211ENST00000487698 TTC34A8MYJ7 566 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 ATP5BP06576 529 aaKnown RBP9.43□□□□□ -0.9
SF3B1-211ENST00000487698 PRSS56P0CW18 603 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 BGNP21810 368 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 HNF1BP35680 557 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 SLC6A11P48066 632 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 RAD51Q06609 339 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 ZNF460Q14592 562 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 COL19A1Q14993 1142 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 FASTKD1Q53R41 847 aaKnown RBP9.43□□□□□ -0.9
SF3B1-211ENST00000487698 HECTD2Q5U5R9 776 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 CES4AQ5XG92 561 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 ZNF549Q6P9A3 640 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 CACNA2D3Q8IZS8 1091 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 TMEM151AQ8N4L1 468 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 ST13P5Q8NFI4 369 aaPredicted RBP9.43□□□□□ -0.9
SF3B1-211ENST00000487698 LPGAT1Q92604 370 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 NXPE3Q969Y0 559 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 GRAMD1AQ96CP6 724 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 GPR78Q96P69 363 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 TCF12Q99081 682 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 ELAC2Q9BQ52 826 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms