RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 TM7SF2O76062 418 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 PGLSO95336 258 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 CPP00450 1065 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 MMP2P08253 660 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 ALPIP09923 528 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 ATXN1LP0C7T5 689 aaKnown RBP7.19□□□□□ -1.26
UBE4B-209ENST00000487244 CTPS1P17812 591 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 LHCGRP22888 699 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 CCNCP24863 283 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 HSPA9P38646 679 aaKnown RBP7.19□□□□□ -1.26
UBE4B-209ENST00000487244 ARRB1P49407 418 aaPredicted RBP7.19□□□□□ -1.26
UBE4B-209ENST00000487244 PFN3P60673 137 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 ITKQ08881 620 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 ELP6Q0PNE2 266 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 OVGP1Q12889 678 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 HNRNPDQ14103 355 aaKnown RBP7.19□□□□□ -1.26
UBE4B-209ENST00000487244 PDE1CQ14123 709 aaPredicted RBP7.19□□□□□ -1.26
UBE4B-209ENST00000487244 TRIP6Q15654 476 aaKnown RBP7.19□□□□□ -1.26
UBE4B-209ENST00000487244 WSCD2Q2TBF2 565 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 KCTD16Q68DU8 428 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 ALG1LQ6GMV1 187 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 TIGD7Q6NT04 549 aaPredicted RBP7.19□□□□□ -1.26
UBE4B-209ENST00000487244 AADACL2Q6P093 401 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 ERAP2Q6P179 960 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 LIPIQ6XZB0 460 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 DPPA4Q7L190 304 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 KIAA1328Q86T90 577 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 TSPAN33Q86UF1 283 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 SLCO6A1Q86UG4 719 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 VSIG1Q86XK7 387 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 LRRC49Q8IUZ0 686 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 CCDC13Q8IYE1 715 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 KATNAL2Q8IYT4 538 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 PAF1Q8N7H5 531 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 CNTD1Q8N815 330 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 PNPLA1Q8N8W4 532 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 PLA2G15Q8NCC3 412 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.19□□□□□ -1.26
UBE4B-209ENST00000487244 HCAR2Q8TDS4 363 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 RHBDD1Q8TEB9 315 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 NSMCE1Q8WV22 266 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 ALG3Q92685 438 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 FATE1Q969F0 183 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 FUBP1Q96AE4 644 aaKnown RBP7.19□□□□□ -1.26
UBE4B-209ENST00000487244 SKA1Q96BD8 255 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 HAUS1Q96CS2 278 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 LENG8Q96PV6 779 aaPredicted RBP7.19□□□□□ -1.26
UBE4B-209ENST00000487244 IL12RB2Q99665 862 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 BRD8Q9H0E9 1235 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 TCEAL2Q9H3H9 227 aaPredicted RBP7.19□□□□□ -1.26
UBE4B-209ENST00000487244 SLC32A1Q9H598 525 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 ERVMER34-1Q9H9K5 563 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 RBM22Q9NW64 420 aaKnown RBP eCLIP7.19□□□□□ -1.26
UBE4B-209ENST00000487244 B4GALT6Q9UBX8 382 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 PACSIN2Q9UNF0 486 aaPredicted RBP7.19□□□□□ -1.26
UBE4B-209ENST00000487244 WASF3Q9UPY6 502 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 PCDHGB2Q9Y5G2 931 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 RAI2Q9Y5P3 530 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 CAPN6Q9Y6Q1 641 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 FREM2Q5SZK8 3169 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 KNTC1P50748 2209 aa7.19□□□□□ -1.26
UBE4B-209ENST00000487244 ZZEF1O43149 2961 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 SPTY2D1-AS1A0A0U1RR47 76 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.18□□□□□ -1.26
UBE4B-209ENST00000487244 K7ESM1 405 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 TRIM38O00635 465 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 FPGTO14772 594 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 SCAMP1O15126 338 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 FFAR2O15552 330 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 PJA2O43164 708 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 HYAL3O43820 417 aaPredicted RBP7.18□□□□□ -1.26
UBE4B-209ENST00000487244 FZD6O60353 706 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 DFNA5O60443 496 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 SOCS5O75159 536 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 NEBLO76041 1014 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 RECQL5O94762 991 aaPredicted RBP7.18□□□□□ -1.26
UBE4B-209ENST00000487244 IPO7O95373 1038 aaKnown RBP7.18□□□□□ -1.26
UBE4B-209ENST00000487244 FTCDO95954 541 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 PRLP01236 227 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 JCHAINP01591 159 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 PCCBP05166 539 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 ITGAVP06756 1048 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 ELFN1P0C7U0 828 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 FTH1P19P0C7X4 201 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 MX2P20592 715 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 DGKAP23743 735 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 CTNNA1P35221 906 aaKnown RBP7.18□□□□□ -1.26
UBE4B-209ENST00000487244 CD86P42081 329 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 GRK6P43250 576 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 RXRGP48443 463 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 SUOXP51687 545 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 NAP1L1P55209 391 aaKnown RBP7.18□□□□□ -1.26
UBE4B-209ENST00000487244 IFI35P80217 286 aaPredicted RBP7.18□□□□□ -1.26
UBE4B-209ENST00000487244 FOXK2Q01167 660 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 AP1B1Q10567 949 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 EIF2B5Q13144 721 aaKnown RBP7.18□□□□□ -1.26
UBE4B-209ENST00000487244 LRRC14Q15048 493 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 PRKD1Q15139 912 aaPredicted RBP7.18□□□□□ -1.26
UBE4B-209ENST00000487244 TCEA2Q15560 299 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 CNGA3Q16281 694 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms