RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 NEUROD6Q96NK8 337 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 SLITRK1Q96PX8 696 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 GFM1Q96RP9 751 aaKnown RBP3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 MSTO1Q9BUK6 570 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 POLDIP3Q9BY77 421 aaKnown RBP3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 TKTL2Q9H0I9 626 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 SMARCAD1Q9H4L7 1026 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 RRP7BPQ9NSQ0 103 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 SIRT3Q9NTG7 399 aaPredicted RBP3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 ADD3Q9UEY8 706 aaKnown RBP3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 ZNF215Q9UL58 517 aaPredicted RBP3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 MTMR6Q9Y217 621 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 SRPRBQ9Y5M8 271 aaKnown RBP3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 RAI2Q9Y5P3 530 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 FAM237AA0A1B0GTK4 181 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 hCG_1807616A0A1W2PRN6 198 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 A8MZ25 164 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 NTN3O00634 580 aaPredicted RBP3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 SCAMP1O15126 338 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 AHCYL1O43865 530 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 SLC25A12O75746 678 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 RGS11O94810 467 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 CENPBP07199 599 aaPredicted RBP3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 PORP16435 677 aaPredicted RBP3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 TBXAS1P24557 533 aaPredicted RBP3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 CHATP28329 748 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 UBA7P41226 1012 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 ZP1P60852 638 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 AIMP2Q13155 320 aaKnown RBP3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 PTGR1Q14914 329 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 KRT24Q2M2I5 525 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 USP41Q3LFD5 358 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 SGO1Q5FBB7 561 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 CXorf66Q5JRM2 361 aaPredicted RBP3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 WASHC2DQ5SRD0 308 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 C6orf141Q5SZD1 244 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 GKAP1Q5VSY0 366 aaPredicted RBP3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 DCAF12L2Q5VW00 463 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 ZNF324BQ6AW86 544 aaPredicted RBP3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 FBXO46Q6PJ61 603 aaPredicted RBP3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 CHST9Q7L1S5 443 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 LINGO2Q7L985 606 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 SZRD1Q7Z422 152 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 TICAM1Q8IUC6 712 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 SLC35F3Q8IY50 421 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 MB21D2Q8IYB1 491 aaPredicted RBP3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 SRBD1Q8N5C6 995 aaKnown RBP3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 BEST2Q8NFU1 509 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 HUS1BQ8NHY5 278 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 SGCDQ92629 289 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 ARHGEF26Q96DR7 871 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 TMEM68Q96MH6 324 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 NLRP4Q96MN2 994 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 ZNF570Q96NI8 536 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 ISCUQ9H1K1 167 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 CATSPERBQ9H7T0 1116 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 DDX4Q9NQI0 724 aaKnown RBP3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 CYSLTR2Q9NS75 346 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 CNOT8Q9UFF9 292 aaKnown RBP3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 NFE2L3Q9Y4A8 694 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 SESN1Q9Y6P5 492 aa3.63□□□□□ -1.83
SNRNP27-204ENST00000487029 MS4A18H0YCH9 400 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 H0YGN5 161 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 FIBPO43427 364 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 HCRTR2O43614 444 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 LDB2O43679 373 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 NDUFS3O75489 264 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 NKX2-2O95096 273 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 NDUFB4O95168 129 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 OR2C1O95371 312 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 SYF2O95926 243 aaKnown RBP3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 CSH1P0DML2 217 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 CSH2P0DML3 217 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 ARSBP15848 533 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 IL7RP16871 459 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 ZNF182P17025 639 aaPredicted RBP3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 CD58P19256 250 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 GNLYP22749 145 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 MCM3P25205 808 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 ACTN2P35609 894 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 GARSP41250 739 aaKnown RBP3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 ENTPD1P49961 510 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 CDH8P55286 799 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 P2RX3P56373 397 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 ADORA2A-AS1P86434 159 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 ST3GAL1Q11201 340 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 EPS8Q12929 822 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 PRTGQ2VWP7 1150 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 PLEKHS1Q5SXH7 462 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 C9orf50Q5SZB4 431 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 FBXL22Q6P050 247 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 GLDNQ6ZMI3 551 aaPredicted RBP3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 QSOX2Q6ZRP7 698 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 ZNF329Q86UD4 541 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 CUZD1Q86UP6 607 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 TMEM199Q8N511 208 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 ZBTB2Q8N680 514 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 SCCPDHQ8NBX0 429 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 C7orf57Q8NEG2 295 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 GPT2Q8TD30 523 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms