RNA–Protein interactions for RNA: ENST00000486263.1

NELFCD-209, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-209ENST00000486263 PAMP19021 973 aa13.9□□□□□ -0.18
NELFCD-209ENST00000486263 ECHS1P30084 290 aa13.9□□□□□ -0.18
NELFCD-209ENST00000486263 OXTRP30559 389 aa13.9□□□□□ -0.18
NELFCD-209ENST00000486263 MMP12P39900 470 aa13.9□□□□□ -0.18
NELFCD-209ENST00000486263 TPMTP51580 245 aa13.9□□□□□ -0.18
NELFCD-209ENST00000486263 BRD3Q15059 726 aa13.9□□□□□ -0.18
NELFCD-209ENST00000486263 PTPRRQ15256 657 aa13.9□□□□□ -0.18
NELFCD-209ENST00000486263 AGBL4Q5VU57 503 aa13.9□□□□□ -0.18
NELFCD-209ENST00000486263 LRRC66Q68CR7 880 aa13.9□□□□□ -0.18
NELFCD-209ENST00000486263 TBC1D3GQ6DHY5 549 aa13.9□□□□□ -0.18
NELFCD-209ENST00000486263 TBC1D3CQ6IPX1 549 aa13.9□□□□□ -0.18
NELFCD-209ENST00000486263 LYSMD3Q7Z3D4 306 aa13.9□□□□□ -0.18
NELFCD-209ENST00000486263 TBC1D3Q8IZP1 549 aaPredicted RBP13.9□□□□□ -0.18
NELFCD-209ENST00000486263 MDGA1Q8NFP4 955 aa13.9□□□□□ -0.18
NELFCD-209ENST00000486263 STYXQ8WUJ0 223 aa13.9□□□□□ -0.18
NELFCD-209ENST00000486263 CFAP36Q96G28 342 aa13.9□□□□□ -0.18
NELFCD-209ENST00000486263 SIGLEC10Q96LC7 697 aa13.9□□□□□ -0.18
NELFCD-209ENST00000486263 SMIM14Q96QK8 99 aa13.9□□□□□ -0.18
NELFCD-209ENST00000486263 LYSMD1Q96S90 227 aa13.9□□□□□ -0.18
NELFCD-209ENST00000486263 EBNA1BP2Q99848 306 aaKnown RBP13.9□□□□□ -0.18
NELFCD-209ENST00000486263 WRAP53Q9BUR4 548 aaKnown RBP13.9□□□□□ -0.18
NELFCD-209ENST00000486263 TPSD1Q9BZJ3 242 aa13.9□□□□□ -0.18
NELFCD-209ENST00000486263 BTBD1Q9H0C5 482 aa13.9□□□□□ -0.18
NELFCD-209ENST00000486263 SEMA4AQ9H3S1 761 aa13.9□□□□□ -0.18
NELFCD-209ENST00000486263 SGK2Q9HBY8 427 aa13.9□□□□□ -0.18
NELFCD-209ENST00000486263 ARGLU1Q9NWB6 273 aaPredicted RBP13.9□□□□□ -0.18
NELFCD-209ENST00000486263 PKD2L2Q9NZM6 624 aa13.9□□□□□ -0.18
NELFCD-209ENST00000486263 SERGEFQ9UGK8 458 aa13.9□□□□□ -0.18
NELFCD-209ENST00000486263 ZC3H7BQ9UGR2 993 aaKnown RBP13.9□□□□□ -0.18
NELFCD-209ENST00000486263 SOX13Q9UN79 622 aa13.9□□□□□ -0.18
NELFCD-209ENST00000486263 CYP8B1Q9UNU6 501 aa13.9□□□□□ -0.18
NELFCD-209ENST00000486263 ITM2BQ9Y287 266 aa13.9□□□□□ -0.18
NELFCD-209ENST00000486263 FADS3Q9Y5Q0 445 aa13.9□□□□□ -0.18
NELFCD-209ENST00000486263 ARL5AQ9Y689 179 aa13.9□□□□□ -0.18
NELFCD-209ENST00000486263 CCDC78A2IDD5 438 aa13.89□□□□□ -0.19
NELFCD-209ENST00000486263 BUD23O43709 281 aaKnown RBP13.89□□□□□ -0.19
NELFCD-209ENST00000486263 LZTS3O60299 673 aaPredicted RBP13.89□□□□□ -0.19
NELFCD-209ENST00000486263 FAM153BP0C7A2 387 aa13.89□□□□□ -0.19
NELFCD-209ENST00000486263 PGAM1P18669 254 aa13.89□□□□□ -0.19
NELFCD-209ENST00000486263 HADHAP40939 763 aa13.89□□□□□ -0.19
NELFCD-209ENST00000486263 PXNP49023 591 aaPredicted RBP13.89□□□□□ -0.19
NELFCD-209ENST00000486263 LIG3P49916 1009 aa13.89□□□□□ -0.19
NELFCD-209ENST00000486263 TMPRSS15P98073 1019 aa13.89□□□□□ -0.19
NELFCD-209ENST00000486263 ACOX1Q15067 660 aa13.89□□□□□ -0.19
NELFCD-209ENST00000486263 FAM153CQ494X1 144 aa13.89□□□□□ -0.19
NELFCD-209ENST00000486263 TMEM52BQ4KMG9 183 aa13.89□□□□□ -0.19
NELFCD-209ENST00000486263 TSTD2Q5T7W7 516 aa13.89□□□□□ -0.19
NELFCD-209ENST00000486263 EMBQ6PCB8 327 aa13.89□□□□□ -0.19
NELFCD-209ENST00000486263 TSPAN33Q86UF1 283 aa13.89□□□□□ -0.19
NELFCD-209ENST00000486263 RASSF3Q86WH2 238 aa13.89□□□□□ -0.19
NELFCD-209ENST00000486263 ZNF669Q96BR6 464 aaPredicted RBP13.89□□□□□ -0.19
NELFCD-209ENST00000486263 SPACA7Q96KW9 195 aa13.89□□□□□ -0.19
NELFCD-209ENST00000486263 TTC25Q96NG3 672 aa13.89□□□□□ -0.19
NELFCD-209ENST00000486263 KIFC1Q9BW19 673 aa13.89□□□□□ -0.19
NELFCD-209ENST00000486263 FAM126AQ9BYI3 521 aaPredicted RBP13.89□□□□□ -0.19
NELFCD-209ENST00000486263 KDM4CQ9H3R0 1056 aa13.89□□□□□ -0.19
NELFCD-209ENST00000486263 MRM3Q9HC36 420 aaKnown RBP13.89□□□□□ -0.19
NELFCD-209ENST00000486263 PREBQ9HCU5 417 aa13.89□□□□□ -0.19
NELFCD-209ENST00000486263 CHRAC1Q9NRG0 131 aa13.89□□□□□ -0.19
NELFCD-209ENST00000486263 RAD18Q9NS91 495 aa13.89□□□□□ -0.19
NELFCD-209ENST00000486263 USP36Q9P275 1121 aaKnown RBP13.89□□□□□ -0.19
NELFCD-209ENST00000486263 TEX264Q9Y6I9 313 aa13.89□□□□□ -0.19
NELFCD-209ENST00000486263 RPS6KL1Q9Y6S9 549 aa13.89□□□□□ -0.19
NELFCD-209ENST00000486263 A0A0U1RQS6 177 aa13.88□□□□□ -0.19
NELFCD-209ENST00000486263 FAM237BA0A1B0GVD1 139 aa13.88□□□□□ -0.19
NELFCD-209ENST00000486263 GOLGA8CPA6NN73 597 aa13.88□□□□□ -0.19
NELFCD-209ENST00000486263 AURKAO14965 403 aa13.88□□□□□ -0.19
NELFCD-209ENST00000486263 AREL1O15033 823 aa13.88□□□□□ -0.19
NELFCD-209ENST00000486263 AXIN1O15169 862 aa13.88□□□□□ -0.19
NELFCD-209ENST00000486263 PLRG1O43660 514 aaKnown RBP13.88□□□□□ -0.19
NELFCD-209ENST00000486263 MMP20O60882 483 aa13.88□□□□□ -0.19
NELFCD-209ENST00000486263 NDUFS2O75306 463 aa13.88□□□□□ -0.19
NELFCD-209ENST00000486263 PAPSS2O95340 614 aaPredicted RBP13.88□□□□□ -0.19
NELFCD-209ENST00000486263 C7P10643 843 aa13.88□□□□□ -0.19
NELFCD-209ENST00000486263 PHBP35232 272 aa13.88□□□□□ -0.19
NELFCD-209ENST00000486263 HMGCLP35914 325 aa13.88□□□□□ -0.19
NELFCD-209ENST00000486263 PMS2P54278 862 aa13.88□□□□□ -0.19
NELFCD-209ENST00000486263 ADPRHP54922 357 aa13.88□□□□□ -0.19
NELFCD-209ENST00000486263 PRAMEP78395 509 aa13.88□□□□□ -0.19
NELFCD-209ENST00000486263 FASTKD3Q14CZ7 662 aaKnown RBP13.88□□□□□ -0.19
NELFCD-209ENST00000486263 CNGA3Q16281 694 aa13.88□□□□□ -0.19
NELFCD-209ENST00000486263 USP39Q53GS9 565 aaKnown RBP13.88□□□□□ -0.19
NELFCD-209ENST00000486263 SPANXN3Q5MJ09 141 aa13.88□□□□□ -0.19
NELFCD-209ENST00000486263 ZC3H14Q6PJT7 736 aaKnown RBP13.88□□□□□ -0.19
NELFCD-209ENST00000486263 CES3Q6UWW8 571 aa13.88□□□□□ -0.19
NELFCD-209ENST00000486263 LIPIQ6XZB0 460 aa13.88□□□□□ -0.19
NELFCD-209ENST00000486263 CAPN12Q6ZSI9 719 aa13.88□□□□□ -0.19
NELFCD-209ENST00000486263 TMC3Q7Z5M5 1100 aa13.88□□□□□ -0.19
NELFCD-209ENST00000486263 MAML2Q8IZL2 1156 aaPredicted RBP13.88□□□□□ -0.19
NELFCD-209ENST00000486263 TTC30BQ8N4P2 665 aa13.88□□□□□ -0.19
NELFCD-209ENST00000486263 OR4K2Q8NGD2 314 aa13.88□□□□□ -0.19
NELFCD-209ENST00000486263 NELL1Q92832 810 aa13.88□□□□□ -0.19
NELFCD-209ENST00000486263 C9orf72Q96LT7 481 aa13.88□□□□□ -0.19
NELFCD-209ENST00000486263 VPS37BQ9H9H4 285 aa13.88□□□□□ -0.19
NELFCD-209ENST00000486263 BPIFA1Q9NP55 256 aa13.88□□□□□ -0.19
NELFCD-209ENST00000486263 PRMT8Q9NR22 394 aaPredicted RBP13.88□□□□□ -0.19
NELFCD-209ENST00000486263 EBF1Q9UH73 591 aa13.88□□□□□ -0.19
NELFCD-209ENST00000486263 GGT7Q9UJ14 662 aa13.88□□□□□ -0.19
NELFCD-209ENST00000486263 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.88□□□□□ -0.19
NELFCD-209ENST00000486263 OTOGLQ3ZCN5 2332 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms