RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 CCDC122Q5T0U0 273 aa20.91■□□□□ 0.94
LMBR1-217ENST00000485985 ESRP1Q6NXG1 681 aaKnown RBP20.91■□□□□ 0.94
LMBR1-217ENST00000485985 INO80CQ6PI98 192 aaPredicted RBP20.91■□□□□ 0.94
LMBR1-217ENST00000485985 FOXR1Q6PIV2 292 aa20.91■□□□□ 0.94
LMBR1-217ENST00000485985 ARL14Q8N4G2 192 aa20.91■□□□□ 0.94
LMBR1-217ENST00000485985 ZNF564Q8TBZ8 553 aaPredicted RBP20.91■□□□□ 0.94
LMBR1-217ENST00000485985 PDCD6IPQ8WUM4 868 aaKnown RBP20.91■□□□□ 0.94
LMBR1-217ENST00000485985 COQ10AQ96MF6 247 aa20.91■□□□□ 0.94
LMBR1-217ENST00000485985 RBM15Q96T37 977 aaKnown RBP eCLIP20.91■□□□□ 0.94
LMBR1-217ENST00000485985 LGR4Q9BXB1 951 aa20.91■□□□□ 0.94
LMBR1-217ENST00000485985 MRPL40Q9NQ50 206 aaKnown RBP20.91■□□□□ 0.94
LMBR1-217ENST00000485985 RABGEF1Q9UJ41 708 aa20.91■□□□□ 0.94
LMBR1-217ENST00000485985 PADI4Q9UM07 663 aa20.91■□□□□ 0.94
LMBR1-217ENST00000485985 DOLKQ9UPQ8 538 aa20.91■□□□□ 0.94
LMBR1-217ENST00000485985 DGKBQ9Y6T7 804 aa20.91■□□□□ 0.94
LMBR1-217ENST00000485985 B8ZZF3 427 aa20.9■□□□□ 0.94
LMBR1-217ENST00000485985 CTSEP14091 401 aa20.9■□□□□ 0.94
LMBR1-217ENST00000485985 LHCGRP22888 699 aa20.9■□□□□ 0.94
LMBR1-217ENST00000485985 GJC1P36383 396 aa20.9■□□□□ 0.94
LMBR1-217ENST00000485985 MLLT3P42568 568 aaPredicted RBP20.9■□□□□ 0.94
LMBR1-217ENST00000485985 MMP13P45452 471 aa20.9■□□□□ 0.94
LMBR1-217ENST00000485985 DPYSL3Q14195 570 aa20.9■□□□□ 0.94
LMBR1-217ENST00000485985 ACOX1Q15067 660 aa20.9■□□□□ 0.94
LMBR1-217ENST00000485985 PTPRRQ15256 657 aa20.9■□□□□ 0.94
LMBR1-217ENST00000485985 ATP13A4Q4VNC1 1196 aa20.9■□□□□ 0.94
LMBR1-217ENST00000485985 LVRNQ6Q4G3 990 aa20.9■□□□□ 0.94
LMBR1-217ENST00000485985 CLEC14AQ86T13 490 aa20.9■□□□□ 0.94
LMBR1-217ENST00000485985 OR56A4Q8NGH8 313 aa20.9■□□□□ 0.94
LMBR1-217ENST00000485985 PACSIN1Q9BY11 444 aa20.9■□□□□ 0.94
LMBR1-217ENST00000485985 XPO4Q9C0E2 1151 aaKnown RBP20.9■□□□□ 0.94
LMBR1-217ENST00000485985 RCOR3Q9P2K3 495 aaPredicted RBP20.9■□□□□ 0.94
LMBR1-217ENST00000485985 GULP1Q9UBP9 304 aa20.9■□□□□ 0.94
LMBR1-217ENST00000485985 PIEZO2Q9H5I5 2752 aa20.9■□□□□ 0.94
LMBR1-217ENST00000485985 MYO18BQ8IUG5 2567 aa20.89■□□□□ 0.93
LMBR1-217ENST00000485985 CCDC187A0A096LP49 1063 aa20.89■□□□□ 0.93
LMBR1-217ENST00000485985 NPIPB15A6NHN6 443 aaPredicted RBP20.89■□□□□ 0.93
LMBR1-217ENST00000485985 MYO1FO00160 1098 aa20.89■□□□□ 0.93
LMBR1-217ENST00000485985 CACNB4O00305 520 aaPredicted RBP20.89■□□□□ 0.93
LMBR1-217ENST00000485985 TNFSF15O95150 251 aa20.89■□□□□ 0.93
LMBR1-217ENST00000485985 HNRNPH3P31942 346 aaKnown RBP20.89■□□□□ 0.93
LMBR1-217ENST00000485985 TRIM23P36406 574 aa20.89■□□□□ 0.93
LMBR1-217ENST00000485985 SSR1P43307 286 aaKnown RBP20.89■□□□□ 0.93
LMBR1-217ENST00000485985 SPIDRQ14159 915 aa20.89■□□□□ 0.93
LMBR1-217ENST00000485985 NCBP2-AS2Q69YL0 99 aa20.89■□□□□ 0.93
LMBR1-217ENST00000485985 CCDC81Q6ZN84 652 aa20.89■□□□□ 0.93
LMBR1-217ENST00000485985 SFTPA2Q8IWL1 248 aa20.89■□□□□ 0.93
LMBR1-217ENST00000485985 ATL2Q8NHH9 583 aa20.89■□□□□ 0.93
LMBR1-217ENST00000485985 CCDC74AQ96AQ1 378 aa20.89■□□□□ 0.93
LMBR1-217ENST00000485985 NUS1Q96E22 293 aa20.89■□□□□ 0.93
LMBR1-217ENST00000485985 GPR34Q9UPC5 381 aa20.89■□□□□ 0.93
LMBR1-217ENST00000485985 HEXIM1O94992 359 aaKnown RBP20.88■□□□□ 0.93
LMBR1-217ENST00000485985 VIPR1P32241 457 aa20.88■□□□□ 0.93
LMBR1-217ENST00000485985 TAS2R40P59535 323 aa20.88■□□□□ 0.93
LMBR1-217ENST00000485985 CLN3Q13286 438 aa20.88■□□□□ 0.93
LMBR1-217ENST00000485985 MARC1Q5VT66 337 aa20.88■□□□□ 0.93
LMBR1-217ENST00000485985 KIAA1614Q5VZ46 1190 aa20.88■□□□□ 0.93
LMBR1-217ENST00000485985 PNCKQ6P2M8 343 aa20.88■□□□□ 0.93
LMBR1-217ENST00000485985 HSD11B1LQ7Z5J1 315 aa20.88■□□□□ 0.93
LMBR1-217ENST00000485985 GKN2Q86XP6 184 aa20.88■□□□□ 0.93
LMBR1-217ENST00000485985 BBS5Q8N3I7 341 aa20.88■□□□□ 0.93
LMBR1-217ENST00000485985 SDR16C5Q8N3Y7 309 aa20.88■□□□□ 0.93
LMBR1-217ENST00000485985 SCG3Q8WXD2 468 aaKnown RBP20.88■□□□□ 0.93
LMBR1-217ENST00000485985 MED8Q96G25 268 aa20.88■□□□□ 0.93
LMBR1-217ENST00000485985 WDR26Q9H7D7 661 aa20.88■□□□□ 0.93
LMBR1-217ENST00000485985 SYNDIG1Q9H7V2 258 aa20.88■□□□□ 0.93
LMBR1-217ENST00000485985 NT5MQ9NPB1 228 aa20.88■□□□□ 0.93
LMBR1-217ENST00000485985 A0A0U1RQS6 177 aa20.87■□□□□ 0.93
LMBR1-217ENST00000485985 NTN3O00634 580 aaPredicted RBP20.87■□□□□ 0.93
LMBR1-217ENST00000485985 PGLSO95336 258 aa20.87■□□□□ 0.93
LMBR1-217ENST00000485985 MAP3K6O95382 1288 aa20.87■□□□□ 0.93
LMBR1-217ENST00000485985 TNFP01375 233 aa20.87■□□□□ 0.93
LMBR1-217ENST00000485985 ITGA2BP08514 1039 aa20.87■□□□□ 0.93
LMBR1-217ENST00000485985 HOXC4P09017 264 aaPredicted RBP20.87■□□□□ 0.93
LMBR1-217ENST00000485985 GARSP41250 739 aaKnown RBP20.87■□□□□ 0.93
LMBR1-217ENST00000485985 GALNT2Q10471 571 aa20.87■□□□□ 0.93
LMBR1-217ENST00000485985 IHHQ14623 411 aa20.87■□□□□ 0.93
LMBR1-217ENST00000485985 DENND2CQ68D51 928 aa20.87■□□□□ 0.93
LMBR1-217ENST00000485985 TSPAN33Q86UF1 283 aa20.87■□□□□ 0.93
LMBR1-217ENST00000485985 TEX26Q8N6G2 289 aa20.87■□□□□ 0.93
LMBR1-217ENST00000485985 CCL4L1Q8NHW4 92 aa20.87■□□□□ 0.93
LMBR1-217ENST00000485985 NSMCE1Q8WV22 266 aa20.87■□□□□ 0.93
LMBR1-217ENST00000485985 DTD2Q96FN9 168 aa20.87■□□□□ 0.93
LMBR1-217ENST00000485985 SMIM14Q96QK8 99 aa20.87■□□□□ 0.93
LMBR1-217ENST00000485985 MCCC1Q96RQ3 725 aaPredicted RBP20.87■□□□□ 0.93
LMBR1-217ENST00000485985 TMEM168Q9H0V1 697 aa20.87■□□□□ 0.93
LMBR1-217ENST00000485985 CTTNBP2NLQ9P2B4 639 aa20.87■□□□□ 0.93
LMBR1-217ENST00000485985 A0A1W2PQ67 120 aa20.86■□□□□ 0.93
LMBR1-217ENST00000485985 PRSS38A1L453 326 aa20.86■□□□□ 0.93
LMBR1-217ENST00000485985 PROSCO94903 275 aa20.86■□□□□ 0.93
LMBR1-217ENST00000485985 PDHA1P08559 390 aa20.86■□□□□ 0.93
LMBR1-217ENST00000485985 MYCLP1P12525 358 aaPredicted RBP20.86■□□□□ 0.93
LMBR1-217ENST00000485985 ETV3P41162 512 aa20.86■□□□□ 0.93
LMBR1-217ENST00000485985 PAFAH1B3Q15102 231 aaKnown RBP20.86■□□□□ 0.93
LMBR1-217ENST00000485985 HADHQ16836 314 aaKnown RBP20.86■□□□□ 0.93
LMBR1-217ENST00000485985 ASTE1Q2TB18 679 aaPredicted RBP20.86■□□□□ 0.93
LMBR1-217ENST00000485985 ANKRD20A8PQ5CZ79 823 aa20.86■□□□□ 0.93
LMBR1-217ENST00000485985 RALGPS1Q5JS13 557 aa20.86■□□□□ 0.93
LMBR1-217ENST00000485985 HEATR4Q86WZ0 1026 aa20.86■□□□□ 0.93
LMBR1-217ENST00000485985 CBARPQ8N350 705 aaPredicted RBP20.86■□□□□ 0.93
LMBR1-217ENST00000485985 GPR156Q8NFN8 814 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms