RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 FBXO39Q8N4B4 442 aa17.17■□□□□ 0.34
SMC4-216ENST00000485645 NIPA2Q8N8Q9 360 aa17.17■□□□□ 0.34
SMC4-216ENST00000485645 TMEM74Q96NL1 305 aa17.17■□□□□ 0.34
SMC4-216ENST00000485645 MGME1Q9BQP7 344 aa17.17■□□□□ 0.34
SMC4-216ENST00000485645 THAP2Q9H0W7 228 aa17.17■□□□□ 0.34
SMC4-216ENST00000485645 DPEP2Q9H4A9 486 aa17.17■□□□□ 0.34
SMC4-216ENST00000485645 PCDH18Q9HCL0 1135 aa17.17■□□□□ 0.34
SMC4-216ENST00000485645 IP6K2Q9UHH9 426 aa17.17■□□□□ 0.34
SMC4-216ENST00000485645 APPL1Q9UKG1 709 aa17.17■□□□□ 0.34
SMC4-216ENST00000485645 A0A1W2PQJ5 194 aa17.16■□□□□ 0.34
SMC4-216ENST00000485645 PRSS38A1L453 326 aa17.16■□□□□ 0.34
SMC4-216ENST00000485645 B4DGG1 531 aa17.16■□□□□ 0.34
SMC4-216ENST00000485645 NOBOXO60393 691 aa17.16■□□□□ 0.34
SMC4-216ENST00000485645 C1QL1O75973 258 aa17.16■□□□□ 0.34
SMC4-216ENST00000485645 HEXIM1O94992 359 aaKnown RBP17.16■□□□□ 0.34
SMC4-216ENST00000485645 CYP2A6P11509 494 aaPredicted RBP17.16■□□□□ 0.34
SMC4-216ENST00000485645 MYCLP1P12525 358 aaPredicted RBP17.16■□□□□ 0.34
SMC4-216ENST00000485645 PTMSP20962 102 aa17.16■□□□□ 0.34
SMC4-216ENST00000485645 MMP13P45452 471 aa17.16■□□□□ 0.34
SMC4-216ENST00000485645 MAXP61244 160 aa17.16■□□□□ 0.34
SMC4-216ENST00000485645 C14orf28Q4W4Y0 310 aa17.16■□□□□ 0.34
SMC4-216ENST00000485645 CERCAMQ5T4B2 595 aa17.16■□□□□ 0.34
SMC4-216ENST00000485645 TXNRD3NBQ6F5E7 133 aa17.16■□□□□ 0.34
SMC4-216ENST00000485645 RAB11FIP2Q7L804 512 aa17.16■□□□□ 0.34
SMC4-216ENST00000485645 CCNJLQ8IV13 435 aa17.16■□□□□ 0.34
SMC4-216ENST00000485645 Q8N9G6 341 aaPredicted RBP17.16■□□□□ 0.34
SMC4-216ENST00000485645 SYN2Q92777 582 aaPredicted RBP17.16■□□□□ 0.34
SMC4-216ENST00000485645 BTBD6Q96KE9 485 aa17.16■□□□□ 0.34
SMC4-216ENST00000485645 FUCA2Q9BTY2 467 aa17.16■□□□□ 0.34
SMC4-216ENST00000485645 NUP85Q9BW27 656 aa17.16■□□□□ 0.34
SMC4-216ENST00000485645 FOXP3Q9BZS1 431 aa17.16■□□□□ 0.34
SMC4-216ENST00000485645 PHPT1Q9NRX4 125 aaPredicted RBP17.16■□□□□ 0.34
SMC4-216ENST00000485645 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.16■□□□□ 0.34
SMC4-216ENST00000485645 LRIT1Q9P2V4 623 aa17.16■□□□□ 0.34
SMC4-216ENST00000485645 ANAPC7Q9UJX3 599 aa17.16■□□□□ 0.34
SMC4-216ENST00000485645 SSUH2Q9Y2M2 353 aa17.16■□□□□ 0.34
SMC4-216ENST00000485645 ARHGEF17Q96PE2 2063 aaPredicted RBP17.16■□□□□ 0.34
SMC4-216ENST00000485645 KALRNO60229 2985 aa17.15■□□□□ 0.34
SMC4-216ENST00000485645 SERPING1P05155 500 aa17.15■□□□□ 0.34
SMC4-216ENST00000485645 CCKBRP32239 447 aa17.15■□□□□ 0.34
SMC4-216ENST00000485645 UGT1A5P35504 534 aa17.15■□□□□ 0.34
SMC4-216ENST00000485645 FANCCQ00597 558 aa17.15■□□□□ 0.34
SMC4-216ENST00000485645 SLC25A11Q02978 314 aaKnown RBP17.15■□□□□ 0.34
SMC4-216ENST00000485645 TRAF2Q12933 501 aa17.15■□□□□ 0.34
SMC4-216ENST00000485645 ARHGEF7Q14155 803 aa17.15■□□□□ 0.34
SMC4-216ENST00000485645 KRT81Q14533 505 aa17.15■□□□□ 0.34
SMC4-216ENST00000485645 ARMC12Q5T9G4 340 aa17.15■□□□□ 0.34
SMC4-216ENST00000485645 SPECC1LQ69YQ0 1117 aa17.15■□□□□ 0.34
SMC4-216ENST00000485645 PCSK4Q6UW60 755 aa17.15■□□□□ 0.34
SMC4-216ENST00000485645 LRRC49Q8IUZ0 686 aa17.15■□□□□ 0.34
SMC4-216ENST00000485645 CBARPQ8N350 705 aaPredicted RBP17.15■□□□□ 0.34
SMC4-216ENST00000485645 CCL4L1Q8NHW4 92 aa17.15■□□□□ 0.34
SMC4-216ENST00000485645 KIAA1524Q8TCG1 905 aa17.15■□□□□ 0.34
SMC4-216ENST00000485645 DTD2Q96FN9 168 aa17.15■□□□□ 0.34
SMC4-216ENST00000485645 SCRN2Q96FV2 425 aa17.15■□□□□ 0.34
SMC4-216ENST00000485645 TEX101Q9BY14 249 aa17.15■□□□□ 0.34
SMC4-216ENST00000485645 CARS2Q9HA77 564 aaKnown RBP17.15■□□□□ 0.34
SMC4-216ENST00000485645 RCOR3Q9P2K3 495 aaPredicted RBP17.15■□□□□ 0.34
SMC4-216ENST00000485645 RNF215Q9Y6U7 377 aa17.15■□□□□ 0.34
SMC4-216ENST00000485645 MYO1FO00160 1098 aa17.14■□□□□ 0.33
SMC4-216ENST00000485645 PSMD11O00231 422 aa17.14■□□□□ 0.33
SMC4-216ENST00000485645 NUDT21O43809 227 aaKnown RBP17.14■□□□□ 0.33
SMC4-216ENST00000485645 PGLSO95336 258 aa17.14■□□□□ 0.33
SMC4-216ENST00000485645 CYP1A2P05177 515 aa17.14■□□□□ 0.33
SMC4-216ENST00000485645 CCNB1P14635 433 aa17.14■□□□□ 0.33
SMC4-216ENST00000485645 LHCGRP22888 699 aa17.14■□□□□ 0.33
SMC4-216ENST00000485645 PBX1P40424 430 aa17.14■□□□□ 0.33
SMC4-216ENST00000485645 ETV3P41162 512 aa17.14■□□□□ 0.33
SMC4-216ENST00000485645 SSR1P43307 286 aaKnown RBP17.14■□□□□ 0.33
SMC4-216ENST00000485645 UBASH3AP57075 661 aa17.14■□□□□ 0.33
SMC4-216ENST00000485645 ZBED6P86452 979 aa17.14■□□□□ 0.33
SMC4-216ENST00000485645 HLTFQ14527 1009 aaKnown RBP eCLIP17.14■□□□□ 0.33
SMC4-216ENST00000485645 NFKBIBQ15653 356 aa17.14■□□□□ 0.33
SMC4-216ENST00000485645 USP45Q70EL2 814 aa17.14■□□□□ 0.33
SMC4-216ENST00000485645 HSD11B1LQ7Z5J1 315 aa17.14■□□□□ 0.33
SMC4-216ENST00000485645 SPRED1Q7Z699 444 aa17.14■□□□□ 0.33
SMC4-216ENST00000485645 HEATR4Q86WZ0 1026 aa17.14■□□□□ 0.33
SMC4-216ENST00000485645 JAMLQ86YT9 394 aa17.14■□□□□ 0.33
SMC4-216ENST00000485645 SFTPA2Q8IWL1 248 aa17.14■□□□□ 0.33
SMC4-216ENST00000485645 NDUFAF2Q8N183 169 aa17.14■□□□□ 0.33
SMC4-216ENST00000485645 GPBAR1Q8TDU6 330 aa17.14■□□□□ 0.33
SMC4-216ENST00000485645 CPLX3Q8WVH0 158 aa17.14■□□□□ 0.33
SMC4-216ENST00000485645 SNRNP27Q8WVK2 155 aaKnown RBP17.14■□□□□ 0.33
SMC4-216ENST00000485645 WBP1Q96G27 269 aa17.14■□□□□ 0.33
SMC4-216ENST00000485645 SUDS3Q9H7L9 328 aaPredicted RBP17.14■□□□□ 0.33
SMC4-216ENST00000485645 CBX8Q9HC52 389 aa17.14■□□□□ 0.33
SMC4-216ENST00000485645 NT5MQ9NPB1 228 aa17.14■□□□□ 0.33
SMC4-216ENST00000485645 ATXN7L1Q9ULK2 861 aaPredicted RBP17.14■□□□□ 0.33
SMC4-216ENST00000485645 PCDHGA7Q9Y5G6 932 aa17.14■□□□□ 0.33
SMC4-216ENST00000485645 GCN1Q92616 2671 aaKnown RBP17.14■□□□□ 0.33
SMC4-216ENST00000485645 A0A087X0T9 212 aa17.13■□□□□ 0.33
SMC4-216ENST00000485645 GOLGA6CA6NDK9 693 aa17.13■□□□□ 0.33
SMC4-216ENST00000485645 GOLGA6BA6NDN3 693 aa17.13■□□□□ 0.33
SMC4-216ENST00000485645 NPIPB15A6NHN6 443 aaPredicted RBP17.13■□□□□ 0.33
SMC4-216ENST00000485645 K7ENP7 123 aa17.13■□□□□ 0.33
SMC4-216ENST00000485645 CEACAM5P06731 702 aa17.13■□□□□ 0.33
SMC4-216ENST00000485645 JMJD7P0C870 316 aa17.13■□□□□ 0.33
SMC4-216ENST00000485645 FAM228BP0C875 321 aa17.13■□□□□ 0.33
SMC4-216ENST00000485645 GOLGA6DP0CG33 693 aa17.13■□□□□ 0.33
SMC4-216ENST00000485645 KRT10P13645 584 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms