RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 MAGEE1Q9HCI5 957 aa17.8■□□□□ 0.44
SREBF1-213ENST00000485080 RGSL1A5PLK6 1076 aa17.79■□□□□ 0.44
SREBF1-213ENST00000485080 FLRT2O43155 660 aa17.79■□□□□ 0.44
SREBF1-213ENST00000485080 GCATO75600 419 aa17.79■□□□□ 0.44
SREBF1-213ENST00000485080 ANXA9O76027 345 aa17.79■□□□□ 0.44
SREBF1-213ENST00000485080 CEACAM1P13688 526 aa17.79■□□□□ 0.44
SREBF1-213ENST00000485080 MSNP26038 577 aaKnown RBP17.79■□□□□ 0.44
SREBF1-213ENST00000485080 STIP1P31948 543 aaKnown RBP17.79■□□□□ 0.44
SREBF1-213ENST00000485080 WNT3AP56704 352 aa17.79■□□□□ 0.44
SREBF1-213ENST00000485080 PTK2BQ14289 1009 aa17.79■□□□□ 0.44
SREBF1-213ENST00000485080 FZD2Q14332 565 aa17.79■□□□□ 0.44
SREBF1-213ENST00000485080 ACOX1Q15067 660 aa17.79■□□□□ 0.44
SREBF1-213ENST00000485080 OASLQ15646 514 aaKnown RBP17.79■□□□□ 0.44
SREBF1-213ENST00000485080 ANKRD20A2Q5SQ80 823 aa17.79■□□□□ 0.44
SREBF1-213ENST00000485080 ANKRD20A1Q5TYW2 823 aa17.79■□□□□ 0.44
SREBF1-213ENST00000485080 ANKRD20A3Q5VUR7 823 aa17.79■□□□□ 0.44
SREBF1-213ENST00000485080 LRRC66Q68CR7 880 aa17.79■□□□□ 0.44
SREBF1-213ENST00000485080 DRICH1Q6PGQ1 229 aaPredicted RBP17.79■□□□□ 0.44
SREBF1-213ENST00000485080 ZNF765Q7L2R6 523 aa17.79■□□□□ 0.44
SREBF1-213ENST00000485080 KANSL1Q7Z3B3 1105 aa17.79■□□□□ 0.44
SREBF1-213ENST00000485080 HSD11B1LQ7Z5J1 315 aa17.79■□□□□ 0.44
SREBF1-213ENST00000485080 NRSN1Q8IZ57 195 aa17.79■□□□□ 0.44
SREBF1-213ENST00000485080 MAIP1Q8WWC4 291 aa17.79■□□□□ 0.44
SREBF1-213ENST00000485080 FAM118BQ9BPY3 351 aa17.79■□□□□ 0.44
SREBF1-213ENST00000485080 GOLGA4Q13439 2230 aaKnown RBP17.78■□□□□ 0.44
SREBF1-213ENST00000485080 DCDC2BA2VCK2 349 aa17.78■□□□□ 0.44
SREBF1-213ENST00000485080 A8MX80 341 aa17.78■□□□□ 0.44
SREBF1-213ENST00000485080 LIASO43766 372 aa17.78■□□□□ 0.44
SREBF1-213ENST00000485080 CBFA2T3O75081 653 aa17.78■□□□□ 0.44
SREBF1-213ENST00000485080 PMPCBO75439 489 aa17.78■□□□□ 0.44
SREBF1-213ENST00000485080 EPHA8P29322 1005 aaPredicted RBP17.78■□□□□ 0.44
SREBF1-213ENST00000485080 INPP5AQ14642 412 aa17.78■□□□□ 0.44
SREBF1-213ENST00000485080 PTPRRQ15256 657 aa17.78■□□□□ 0.44
SREBF1-213ENST00000485080 SIX1Q15475 284 aaPredicted RBP17.78■□□□□ 0.44
SREBF1-213ENST00000485080 FAM182AQ5T1J6 154 aa17.78■□□□□ 0.44
SREBF1-213ENST00000485080 CCDC70Q6NSX1 233 aa17.78■□□□□ 0.44
SREBF1-213ENST00000485080 MACC1Q6ZN28 852 aa17.78■□□□□ 0.44
SREBF1-213ENST00000485080 PARGQ86W56 976 aa17.78■□□□□ 0.44
SREBF1-213ENST00000485080 NUS1Q96E22 293 aa17.78■□□□□ 0.44
SREBF1-213ENST00000485080 MRGPRX2Q96LB1 330 aa17.78■□□□□ 0.44
SREBF1-213ENST00000485080 TBATAQ96M53 351 aa17.78■□□□□ 0.44
SREBF1-213ENST00000485080 SMIM14Q96QK8 99 aa17.78■□□□□ 0.44
SREBF1-213ENST00000485080 SLC32A1Q9H598 525 aa17.78■□□□□ 0.44
SREBF1-213ENST00000485080 RSPH14Q9UHP6 348 aa17.78■□□□□ 0.44
SREBF1-213ENST00000485080 AAR2Q9Y312 384 aaKnown RBP17.78■□□□□ 0.44
SREBF1-213ENST00000485080 KIF5CO60282 957 aa17.77■□□□□ 0.44
SREBF1-213ENST00000485080 CSF2P04141 144 aa17.77■□□□□ 0.44
SREBF1-213ENST00000485080 ATXN1LP0C7T5 689 aaKnown RBP17.77■□□□□ 0.44
SREBF1-213ENST00000485080 NME1P15531 152 aaKnown RBP17.77■□□□□ 0.44
SREBF1-213ENST00000485080 HLA-DPA1P20036 260 aa17.77■□□□□ 0.44
SREBF1-213ENST00000485080 ETV3P41162 512 aa17.77■□□□□ 0.44
SREBF1-213ENST00000485080 GRK6P43250 576 aa17.77■□□□□ 0.44
SREBF1-213ENST00000485080 GEMP55040 296 aa17.77■□□□□ 0.44
SREBF1-213ENST00000485080 KIAA1024LP59773 190 aa17.77■□□□□ 0.44
SREBF1-213ENST00000485080 PDE1CQ14123 709 aaPredicted RBP17.77■□□□□ 0.44
SREBF1-213ENST00000485080 CCNG2Q16589 344 aa17.77■□□□□ 0.44
SREBF1-213ENST00000485080 INAVAQ3KP66 663 aa17.77■□□□□ 0.44
SREBF1-213ENST00000485080 PRAMEF14Q5SWL7 426 aa17.77■□□□□ 0.44
SREBF1-213ENST00000485080 PNCKQ6P2M8 343 aa17.77■□□□□ 0.44
SREBF1-213ENST00000485080 Q6ZVL8 140 aa17.77■□□□□ 0.44
SREBF1-213ENST00000485080 ERMP1Q7Z2K6 904 aa17.77■□□□□ 0.44
SREBF1-213ENST00000485080 DGLUCYQ7Z3D6 616 aa17.77■□□□□ 0.44
SREBF1-213ENST00000485080 NAXDQ8IW45 347 aa17.77■□□□□ 0.44
SREBF1-213ENST00000485080 BAHD1Q8TBE0 780 aaPredicted RBP17.77■□□□□ 0.44
SREBF1-213ENST00000485080 PBKQ96KB5 322 aa17.77■□□□□ 0.44
SREBF1-213ENST00000485080 GORASP1Q9BQQ3 440 aa17.77■□□□□ 0.44
SREBF1-213ENST00000485080 APOOQ9BUR5 198 aa17.77■□□□□ 0.44
SREBF1-213ENST00000485080 TRABDQ9H4I3 376 aa17.77■□□□□ 0.44
SREBF1-213ENST00000485080 NFKBIL1Q9UBC1 381 aaPredicted RBP17.77■□□□□ 0.44
SREBF1-213ENST00000485080 PCOLCE2Q9UKZ9 415 aa17.77■□□□□ 0.44
SREBF1-213ENST00000485080 TTC7AQ9ULT0 858 aaPredicted RBP17.77■□□□□ 0.44
SREBF1-213ENST00000485080 SH3BP5O60239 455 aa17.76■□□□□ 0.43
SREBF1-213ENST00000485080 KCNK5O95279 499 aa17.76■□□□□ 0.43
SREBF1-213ENST00000485080 PYGLP06737 847 aa17.76■□□□□ 0.43
SREBF1-213ENST00000485080 C1SP09871 688 aa17.76■□□□□ 0.43
SREBF1-213ENST00000485080 TSHRP16473 764 aa17.76■□□□□ 0.43
SREBF1-213ENST00000485080 ADRA1AP35348 466 aa17.76■□□□□ 0.43
SREBF1-213ENST00000485080 THOP1P52888 689 aa17.76■□□□□ 0.43
SREBF1-213ENST00000485080 HNRNPKP61978 463 aaKnown RBP eCLIP17.76■□□□□ 0.433e-6■■□□□ 12
SREBF1-213ENST00000485080 GALNT3Q14435 633 aa17.76■□□□□ 0.43
SREBF1-213ENST00000485080 PRPSAP1Q14558 356 aa17.76■□□□□ 0.43
SREBF1-213ENST00000485080 NFATC4Q14934 902 aa17.76■□□□□ 0.43
SREBF1-213ENST00000485080 PCSK7Q16549 785 aa17.76■□□□□ 0.43
SREBF1-213ENST00000485080 PARP6Q2NL67 630 aa17.76■□□□□ 0.43
SREBF1-213ENST00000485080 P3H1Q32P28 736 aa17.76■□□□□ 0.43
SREBF1-213ENST00000485080 ZNF569Q5MCW4 686 aa17.76■□□□□ 0.43
SREBF1-213ENST00000485080 TPRG1LQ5T0D9 272 aa17.76■□□□□ 0.43
SREBF1-213ENST00000485080 RANBP10Q6VN20 620 aa17.76■□□□□ 0.43
SREBF1-213ENST00000485080 GLRX5Q86SX6 157 aa17.76■□□□□ 0.43
SREBF1-213ENST00000485080 RASGEF1CQ8N431 466 aa17.76■□□□□ 0.43
SREBF1-213ENST00000485080 FAM71DQ8N9W8 422 aa17.76■□□□□ 0.43
SREBF1-213ENST00000485080 PLA2G15Q8NCC3 412 aa17.76■□□□□ 0.43
SREBF1-213ENST00000485080 ATL2Q8NHH9 583 aa17.76■□□□□ 0.43
SREBF1-213ENST00000485080 CCDC110Q8TBZ0 833 aa17.76■□□□□ 0.43
SREBF1-213ENST00000485080 CCHCR1Q8TD31 782 aa17.76■□□□□ 0.43
SREBF1-213ENST00000485080 TMEM121Q9BTD3 319 aa17.76■□□□□ 0.43
SREBF1-213ENST00000485080 CDH19Q9H159 772 aa17.76■□□□□ 0.43
SREBF1-213ENST00000485080 KCND1Q9NSA2 647 aa17.76■□□□□ 0.43
SREBF1-213ENST00000485080 HOMER3Q9NSC5 361 aa17.76■□□□□ 0.43
SREBF1-213ENST00000485080 TRMT1Q9NXH9 659 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms