RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	BAG1	Q99933	345 aa	Predicted RBP	4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	MACROD1	Q9BQ69	325 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	GATA5	Q9BWX5	397 aa	Predicted RBP	4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	AP1M1	Q9BXS5	423 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	SLC35C2	Q9NQQ7	365 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	SNTG1	Q9NSN8	517 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	RNF146	Q9NTX7	359 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	CHORDC1	Q9UHD1	332 aa	Predicted RBP	4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	CARD8	Q9Y2G2	431 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	FAM96B	Q9Y3D0	163 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	CACNA1G	O43497	2377 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	CFAP74	Q9C0B2	1584 aa		4.06	□□□□□ -1.76
VPS8-223	ENST00000485024	NOTCH2	Q04721	2471 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	FMN1	Q68DA7	1419 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	NCOA3	Q9Y6Q9	1424 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	BRWD3	Q6RI45	1802 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	WDR17	Q8IZU2	1322 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024		A0A096LPK6	155 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	IFITM10	A6NMD0	228 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	FAM157A	C9JC47	383 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	EBAG9	O00559	213 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	P4HA2	O15460	535 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	PRPF4	O43172	522 aa	Known RBP eCLIP	4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	BEST1	O76090	585 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	MTA2	O94776	668 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	TMCC1	O94876	653 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	CSPG5	O95196	566 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	TOMM40	O96008	361 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	MT-CYB	P00156	380 aa	Predicted RBP	4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	HOXA13	P31271	388 aa	Predicted RBP	4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	CDA	P32320	146 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	ICAM3	P32942	547 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	HADHA	P40939	763 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	EIF2D	P41214	584 aa	Known RBP	4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	CDH8	P55286	799 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	PPP2R5B	Q15173	497 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	SHB	Q15464	509 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	NTRK2	Q16620	822 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	ALG10	Q5BKT4	473 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	ALG10B	Q5I7T1	473 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	SPECC1	Q5M775	1068 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	TTC39A	Q5SRH9	613 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	TTI2	Q6NXR4	508 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	MIS18BP1	Q6P0N0	1132 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	TSSK4	Q6SA08	328 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	ZNF813	Q6ZN06	617 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	CHST9	Q7L1S5	443 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	UBE2Q1	Q7Z7E8	422 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	ZDHHC23	Q8IYP9	409 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	HACE1	Q8IYU2	909 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	WDTC1	Q8N5D0	677 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	PNLDC1	Q8NA58	520 aa	Known RBP	4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	ZNF398	Q8TD17	642 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	TMEM68	Q96MH6	324 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	TXLNGY	Q9BZA5	131 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	FOXP1	Q9H334	677 aa	Predicted RBP	4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	HIPK3	Q9H422	1215 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	ERRFI1	Q9UJM3	462 aa	Predicted RBP	4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	AAR2	Q9Y312	384 aa	Known RBP	4.05	□□□□□ -1.76
VPS8-223	ENST00000485024	SLC4A4	Q9Y6R1	1079 aa		4.05	□□□□□ -1.76
VPS8-223	ENST00000485024		A0A1W2PRQ8	180 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	FAM170A	A1A519	330 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	CDRT15L2	A8MXV6	281 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024		A8MZ25	164 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	RRH	O14718	337 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	SLC25A12	O75746	678 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	TF	P02787	698 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	MMP3	P08254	477 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	RARG	P13631	454 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	ST6GAL1	P15907	406 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	RRM1	P23921	792 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	ATP5F1	P24539	256 aa	Predicted RBP	4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	MCM3	P25205	808 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	KLRC2	P26717	231 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	GCH1	P30793	250 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	SLC16A2	P36021	539 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	PBX3	P40426	434 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	CENPA	P49450	140 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	ZBED6	P86452	979 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	PMPCA	Q10713	525 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	LRMP	Q12912	555 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	RUNX2	Q13950	521 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	FRG1	Q14331	258 aa	Known RBP	4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	BECN1	Q14457	450 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	RNPS1	Q15287	305 aa	Known RBP	4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	KRT24	Q2M2I5	525 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	C15orf59	Q2T9L4	293 aa	Predicted RBP	4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	ZSCAN23	Q3MJ62	389 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	RAB41	Q5JT25	222 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	LCE1F	Q5T754	118 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	TFAP2D	Q7Z6R9	452 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	ANKRD23	Q86SG2	305 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	ADGRA1	Q86SQ6	560 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	TBC1D26	Q86UD7	250 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	CCDC25	Q86WR0	208 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	ADGRF4	Q8IZF3	695 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	POMGNT2	Q8NAT1	580 aa		4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	OSR1	Q8TAX0	266 aa	Predicted RBP	4.04	□□□□□ -1.76
VPS8-223	ENST00000485024	PSPC1	Q8WXF1	523 aa	Known RBP	4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms