RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 FOXR1Q6PIV2 292 aa28.41■■■□□ 2.14
HLA-C-207ENST00000484378 IGF2-ASQ6U949 168 aa28.41■■■□□ 2.14
HLA-C-207ENST00000484378 FAM46DQ8NEK8 389 aa28.41■■■□□ 2.14
HLA-C-207ENST00000484378 OR6C4Q8NGE1 309 aa28.41■■■□□ 2.14
HLA-C-207ENST00000484378 CTNNBL1Q8WYA6 563 aaPredicted RBP28.41■■■□□ 2.14
HLA-C-207ENST00000484378 DTD2Q96FN9 168 aa28.41■■■□□ 2.14
HLA-C-207ENST00000484378 UBL7Q96S82 380 aaPredicted RBP28.41■■■□□ 2.14
HLA-C-207ENST00000484378 TMEM168Q9H0V1 697 aa28.41■■■□□ 2.14
HLA-C-207ENST00000484378 PHPT1Q9NRX4 125 aaPredicted RBP28.41■■■□□ 2.14
HLA-C-207ENST00000484378 UVRAGQ9P2Y5 699 aa28.41■■■□□ 2.14
HLA-C-207ENST00000484378 NENFQ9UMX5 172 aa28.41■■■□□ 2.14
HLA-C-207ENST00000484378 PRSS38A1L453 326 aa28.4■■■□□ 2.14
HLA-C-207ENST00000484378 NTN3O00634 580 aaPredicted RBP28.4■■■□□ 2.14
HLA-C-207ENST00000484378 PROSCO94903 275 aa28.4■■■□□ 2.14
HLA-C-207ENST00000484378 ETV3P41162 512 aa28.4■■■□□ 2.14
HLA-C-207ENST00000484378 GARSP41250 739 aaKnown RBP28.4■■■□□ 2.14
HLA-C-207ENST00000484378 ARSEP51690 589 aa28.4■■■□□ 2.14
HLA-C-207ENST00000484378 ITKQ08881 620 aa28.4■■■□□ 2.14
HLA-C-207ENST00000484378 GALNT2Q10471 571 aa28.4■■■□□ 2.14
HLA-C-207ENST00000484378 ARHGEF7Q14155 803 aa28.4■■■□□ 2.14
HLA-C-207ENST00000484378 TSR1Q2NL82 804 aaKnown RBP28.4■■■□□ 2.14
HLA-C-207ENST00000484378 NCBP2-AS2Q69YL0 99 aa28.4■■■□□ 2.14
HLA-C-207ENST00000484378 HSD11B1LQ7Z5J1 315 aa28.4■■■□□ 2.14
HLA-C-207ENST00000484378 HEATR4Q86WZ0 1026 aa28.4■■■□□ 2.14
HLA-C-207ENST00000484378 CPNE8Q86YQ8 564 aa28.4■■■□□ 2.14
HLA-C-207ENST00000484378 TEX26Q8N6G2 289 aa28.4■■■□□ 2.14
HLA-C-207ENST00000484378 KCTD6Q8NC69 237 aa28.4■■■□□ 2.14
HLA-C-207ENST00000484378 GFM1Q96RP9 751 aaKnown RBP28.4■■■□□ 2.14
HLA-C-207ENST00000484378 SEMA3CQ99985 751 aa28.4■■■□□ 2.14
HLA-C-207ENST00000484378 ZNF670Q9BS34 389 aa28.4■■■□□ 2.14
HLA-C-207ENST00000484378 POLR1EQ9GZS1 481 aaKnown RBP28.4■■■□□ 2.14
HLA-C-207ENST00000484378 PCDHGA8Q9Y5G5 932 aa28.4■■■□□ 2.14
HLA-C-207ENST00000484378 BAHCC1Q9P281 2608 aa28.4■■■□□ 2.14
HLA-C-207ENST00000484378 GOLGA6CA6NDK9 693 aa28.39■■■□□ 2.14
HLA-C-207ENST00000484378 GOLGA6BA6NDN3 693 aa28.39■■■□□ 2.14
HLA-C-207ENST00000484378 B4DGG1 531 aa28.39■■■□□ 2.14
HLA-C-207ENST00000484378 PSMD11O00231 422 aa28.39■■■□□ 2.14
HLA-C-207ENST00000484378 GOLGA6DP0CG33 693 aa28.39■■■□□ 2.14
HLA-C-207ENST00000484378 HNRNPH3P31942 346 aaKnown RBP28.39■■■□□ 2.14
HLA-C-207ENST00000484378 PAFAH1B3Q15102 231 aaKnown RBP28.39■■■□□ 2.14
HLA-C-207ENST00000484378 ATP13A4Q4VNC1 1196 aa28.39■■■□□ 2.14
HLA-C-207ENST00000484378 BROXQ5VW32 411 aa28.39■■■□□ 2.14
HLA-C-207ENST00000484378 GPR156Q8NFN8 814 aa28.39■■■□□ 2.14
HLA-C-207ENST00000484378 WDR36Q8NI36 951 aaKnown RBP28.39■■■□□ 2.14
HLA-C-207ENST00000484378 KCNE4Q8WWG9 221 aa28.39■■■□□ 2.14
HLA-C-207ENST00000484378 SCRN2Q96FV2 425 aa28.39■■■□□ 2.14
HLA-C-207ENST00000484378 MCCC1Q96RQ3 725 aaPredicted RBP28.39■■■□□ 2.14
HLA-C-207ENST00000484378 SUDS3Q9H7L9 328 aaPredicted RBP28.39■■■□□ 2.14
HLA-C-207ENST00000484378 GOLGA6AQ9NYA3 693 aa28.39■■■□□ 2.14
HLA-C-207ENST00000484378 FASNP49327 2511 aaKnown RBP28.38■■■□□ 2.13
HLA-C-207ENST00000484378 CCDC187A0A096LP49 1063 aa28.38■■■□□ 2.13
HLA-C-207ENST00000484378 D6RAR5 112 aa28.38■■■□□ 2.13
HLA-C-207ENST00000484378 MAP3K6O95382 1288 aa28.38■■■□□ 2.13
HLA-C-207ENST00000484378 RPLP0P05388 317 aaKnown RBP28.38■■■□□ 2.13
HLA-C-207ENST00000484378 H2AFZP0C0S5 128 aa28.38■■■□□ 2.13
HLA-C-207ENST00000484378 KRT10P13645 584 aa28.38■■■□□ 2.13
HLA-C-207ENST00000484378 CTPS1P17812 591 aa28.38■■■□□ 2.13
HLA-C-207ENST00000484378 CCL7P80098 99 aa28.38■■■□□ 2.13
HLA-C-207ENST00000484378 PTPRRQ15256 657 aa28.38■■■□□ 2.13
HLA-C-207ENST00000484378 ANKRD20A8PQ5CZ79 823 aa28.38■■■□□ 2.13
HLA-C-207ENST00000484378 TIGD7Q6NT04 549 aaPredicted RBP28.38■■■□□ 2.13
HLA-C-207ENST00000484378 H2AFVQ71UI9 128 aa28.38■■■□□ 2.13
HLA-C-207ENST00000484378 TSPAN33Q86UF1 283 aa28.38■■■□□ 2.13
HLA-C-207ENST00000484378 SLC46A1Q96NT5 459 aa28.38■■■□□ 2.13
HLA-C-207ENST00000484378 PACSIN1Q9BY11 444 aa28.38■■■□□ 2.13
HLA-C-207ENST00000484378 DPEP2Q9H4A9 486 aa28.38■■■□□ 2.13
HLA-C-207ENST00000484378 DEF6Q9H4E7 631 aa28.38■■■□□ 2.13
HLA-C-207ENST00000484378 CARS2Q9HA77 564 aaKnown RBP28.38■■■□□ 2.13
HLA-C-207ENST00000484378 TTLL3Q9Y4R7 772 aa28.38■■■□□ 2.13
HLA-C-207ENST00000484378 PMS2P1A4D2B8 440 aa28.37■■■□□ 2.13
HLA-C-207ENST00000484378 CXADRP78310 365 aa28.37■■■□□ 2.13
HLA-C-207ENST00000484378 PDK2Q15119 407 aa28.37■■■□□ 2.13
HLA-C-207ENST00000484378 SLC18A3Q16572 532 aa28.37■■■□□ 2.13
HLA-C-207ENST00000484378 ZFYVE27Q5T4F4 411 aa28.37■■■□□ 2.13
HLA-C-207ENST00000484378 RAET1GQ6H3X3 334 aa28.37■■■□□ 2.13
HLA-C-207ENST00000484378 Q6ZVL8 140 aa28.37■■■□□ 2.13
HLA-C-207ENST00000484378 GPR155Q7Z3F1 870 aa28.37■■■□□ 2.13
HLA-C-207ENST00000484378 CCNJLQ8IV13 435 aa28.37■■■□□ 2.13
HLA-C-207ENST00000484378 MAP7D3Q8IWC1 876 aa28.37■■■□□ 2.13
HLA-C-207ENST00000484378 NDUFAF2Q8N183 169 aa28.37■■■□□ 2.13
HLA-C-207ENST00000484378 ARL14Q8N4G2 192 aa28.37■■■□□ 2.13
HLA-C-207ENST00000484378 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP28.37■■■□□ 2.13
HLA-C-207ENST00000484378 CCL4L1Q8NHW4 92 aa28.37■■■□□ 2.13
HLA-C-207ENST00000484378 TEX101Q9BY14 249 aa28.37■■■□□ 2.13
HLA-C-207ENST00000484378 EPB41L5Q9HCM4 733 aa28.37■■■□□ 2.13
HLA-C-207ENST00000484378 HAUS2Q9NVX0 235 aa28.37■■■□□ 2.13
HLA-C-207ENST00000484378 LCMT1Q9UIC8 334 aa28.37■■■□□ 2.13
HLA-C-207ENST00000484378 KIF26BQ2KJY2 2108 aa28.36■■■□□ 2.13
HLA-C-207ENST00000484378 NOBOXO60393 691 aa28.36■■■□□ 2.13
HLA-C-207ENST00000484378 PDHA1P08559 390 aa28.36■■■□□ 2.13
HLA-C-207ENST00000484378 KRT7P08729 469 aa28.36■■■□□ 2.13
HLA-C-207ENST00000484378 GLB1P16278 677 aa28.36■■■□□ 2.13
HLA-C-207ENST00000484378 TAS2R40P59535 323 aa28.36■■■□□ 2.13
HLA-C-207ENST00000484378 CDK3Q00526 305 aa28.36■■■□□ 2.13
HLA-C-207ENST00000484378 IFI16Q16666 785 aaKnown RBP28.36■■■□□ 2.13
HLA-C-207ENST00000484378 C14orf28Q4W4Y0 310 aa28.36■■■□□ 2.13
HLA-C-207ENST00000484378 CERCAMQ5T4B2 595 aa28.36■■■□□ 2.13
HLA-C-207ENST00000484378 SPECC1LQ69YQ0 1117 aa28.36■■■□□ 2.13
HLA-C-207ENST00000484378 OGFOD3Q6PK18 319 aa28.36■■■□□ 2.13
HLA-C-207ENST00000484378 B3GNT8Q7Z7M8 397 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms