RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 CYP2U1Q7Z449 544 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 CPLX4Q7Z7G2 160 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 TRABD2AQ86V40 505 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 NLRP14Q86W24 1093 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 SLC26A11Q86WA9 606 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 SPATS2Q86XZ4 545 aaKnown RBP6.98□□□□□ -1.29
BRCA1-216ENST00000484087 MDM1Q8TC05 714 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 WFIKKN2Q8TEU8 576 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 UCMAQ8WVF2 138 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 SLC44A1Q8WWI5 657 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 MAML1Q92585 1016 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 AZIN2Q96A70 460 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 MTBPQ96DY7 904 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 ALG14Q96F25 216 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 TOE1Q96GM8 510 aaKnown RBP6.98□□□□□ -1.29
BRCA1-216ENST00000484087 SPACA7Q96KW9 195 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 SIGLEC10Q96LC7 697 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 TEKT5Q96M29 485 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 HSPA12BQ96MM6 686 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 DDX50Q9BQ39 737 aaKnown RBP6.98□□□□□ -1.29
BRCA1-216ENST00000484087 GPR174Q9BXC1 333 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 CEP41Q9BYV8 373 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 SLC2A11Q9BYW1 496 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 SLC39A8Q9C0K1 460 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 SP110Q9HB58 689 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 SSU72Q9NP77 194 aaKnown RBP6.98□□□□□ -1.29
BRCA1-216ENST00000484087 PRSS16Q9NQE7 514 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 TMEM248Q9NWD8 314 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 TXNDC16Q9P2K2 825 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 ERVW-1Q9UQF0 538 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 ANKRD36A6QL64 1941 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 IGLV3-10A0A075B6K4 115 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 A0A1W2PP55 124 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 LNP1A1A4G5 178 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 DCDC2BA2VCK2 349 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 F5H423 210 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-216ENST00000484087 MID1O15344 667 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 PRPF4O43172 522 aaKnown RBP eCLIP6.98□□□□□ -1.29
BRCA1-216ENST00000484087 SMAD6O43541 496 aaKnown RBP6.98□□□□□ -1.29
BRCA1-216ENST00000484087 RAMP2O60895 175 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 SUN1O94901 812 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 ZWINTO95229 277 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 FAM107AO95990 144 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 RHOCP08134 193 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 SNRPAP09012 282 aaKnown RBP6.98□□□□□ -1.29
BRCA1-216ENST00000484087 NFKB1P19838 968 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 CA4P22748 312 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 MGAT1P26572 445 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 ACVRL1P37023 503 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 MAPK8P45983 427 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 PSMD8P48556 350 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 MAPKAPK2P49137 400 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 PAPOLAP51003 745 aaKnown RBP6.98□□□□□ -1.29
BRCA1-216ENST00000484087 TPMTP51580 245 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 GEMP55040 296 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 YBEYP58557 167 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-216ENST00000484087 RPS14P62263 151 aaKnown RBP6.98□□□□□ -1.29
BRCA1-216ENST00000484087 CDH17Q12864 832 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 HNRNPDQ14103 355 aaKnown RBP6.98□□□□□ -1.29
BRCA1-216ENST00000484087 SPARCL1Q14515 664 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 KBTBD12Q3ZCT8 623 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 PARP15Q460N3 678 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 HSF5Q4G112 596 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-216ENST00000484087 AASDHQ4L235 1098 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-216ENST00000484087 SPANXN3Q5MJ09 141 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 PLA2G2CQ5R387 149 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 MPP7Q5T2T1 576 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 TTC39BQ5VTQ0 682 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-216ENST00000484087 UNC5AQ6ZN44 842 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 ZNF534Q76KX8 674 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 MMAAQ8IVH4 418 aaKnown RBP6.98□□□□□ -1.29
BRCA1-216ENST00000484087 TP53INP2Q8IXH6 220 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 CYP4X1Q8N118 509 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 UMODL1-AS1Q8N2C9 162 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 STK40Q8N2I9 435 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 BBS5Q8N3I7 341 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 PPM1NQ8N819 430 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 ANKRD42Q8N9B4 389 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 MGARPQ8TDB4 240 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 SNX19Q92543 992 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 PTPRN2Q92932 1015 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 TTC17Q96AE7 1141 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 SIPA1Q96FS4 1042 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 CHMP6Q96FZ7 201 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 ZC3H10Q96K80 434 aaKnown RBP6.98□□□□□ -1.29
BRCA1-216ENST00000484087 FCRL5Q96RD9 977 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 CCT8L2Q96SF2 557 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 DHRS4Q9BTZ2 278 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 IL22Q9GZX6 179 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 FAM107BQ9H098 131 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 MUC3BQ9H195 1237 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 TNKS2Q9H2K2 1166 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 CCDC134Q9H6E4 229 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 C6orf106Q9H6K1 298 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-216ENST00000484087 CAAP1Q9H8G2 361 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 RBM22Q9NW64 420 aaKnown RBP eCLIP6.98□□□□□ -1.29
BRCA1-216ENST00000484087 EURLQ9NYK6 297 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 USP36Q9P275 1121 aaKnown RBP6.98□□□□□ -1.29
BRCA1-216ENST00000484087 ZNF212Q9UDV6 495 aa6.98□□□□□ -1.29
BRCA1-216ENST00000484087 IPO11Q9UI26 975 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms