RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 SEPT10Q9P0V9 454 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 CRNNQ9UBG3 495 aaPredicted RBP4.54□□□□□ -1.68
PTCD3-214ENST00000483925 CNOT8Q9UFF9 292 aaKnown RBP4.54□□□□□ -1.68
PTCD3-214ENST00000483925 FETUBQ9UGM5 382 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 ANGPTL3Q9Y5C1 460 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 PCDHGA5Q9Y5G8 931 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 PCDHGA1Q9Y5H4 931 aa4.54□□□□□ -1.68
PTCD3-214ENST00000483925 TMEM247A6NEH6 219 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 GRXCR1A8MXD5 290 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 TTC34A8MYJ7 566 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 FAM86B1E9PN63 330 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 MCF2LO15068 1137 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 ZBTB43O43298 467 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 CA12O43570 354 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 SMPD2O60906 423 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 PMPCBO75439 489 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 SLCO2B1O94956 709 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 TRUB2O95900 331 aaKnown RBP4.53□□□□□ -1.68
PTCD3-214ENST00000483925 ONECUT2O95948 504 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 HLA-DQA2P01906 255 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 GBAP04062 536 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 PDHA1P08559 390 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 AGAP20933 346 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 ACHEP22303 614 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 LMO1P25800 156 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 GKP32189 559 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 SKIV2L2P42285 1042 aaKnown RBP4.53□□□□□ -1.68
PTCD3-214ENST00000483925 ARSEP51690 589 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 ATXN3P54252 364 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-214ENST00000483925 B4GALNT1Q00973 533 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 FGFBP1Q14512 234 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 RPS6KA1Q15418 735 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 SHBQ15464 509 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 TRADDQ15628 312 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 PROSER3Q2NL68 480 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 CBWD6Q4V339 395 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 CBWD3Q5JTY5 395 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 C12orf60Q5U649 245 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 KRT39Q6A163 491 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 PPP1R21Q6ZMI0 780 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 TAOK1Q7L7X3 1001 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 NEK8Q86SG6 692 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 TMEM200AQ86VY9 491 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 TIGD4Q8IY51 512 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 CLYBLQ8N0X4 340 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 NHLRC2Q8NBF2 726 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 OR52N2Q8NGI0 321 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 RASSF8Q8NHQ8 419 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 CEP76Q8TAP6 659 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 GRAPLQ8TC17 118 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-214ENST00000483925 C2CD4CQ8TF44 421 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 LPGAT1Q92604 370 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 GLG1Q92896 1179 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 WDYHV1Q96HA8 205 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 LINC00615Q96LM1 132 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-214ENST00000483925 NLRP4Q96MN2 994 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 NEK1Q96PY6 1258 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 DCLRE1CQ96SD1 692 aaKnown RBP4.53□□□□□ -1.68
PTCD3-214ENST00000483925 INTS14Q96SY0 518 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 PARK7Q99497 189 aaKnown RBP4.53□□□□□ -1.68
PTCD3-214ENST00000483925 PKP4Q99569 1192 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 SEPT5Q99719 369 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-214ENST00000483925 SH3GL2Q99962 352 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 AMBRA1Q9C0C7 1298 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 VPS33BQ9H267 617 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 RIOX1Q9H6W3 641 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 TMEM206Q9H813 350 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 SAP30LQ9HAJ7 183 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 OLAHQ9NV23 265 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 CYP39A1Q9NYL5 469 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 CNIH4Q9P003 139 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 ZNF624Q9P2J8 865 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-214ENST00000483925 MGAT4CQ9UBM8 478 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 TRPC4Q9UBN4 977 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 FBXL5Q9UKA1 691 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 VPS4AQ9UN37 437 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 CLDN16Q9Y5I7 305 aa4.53□□□□□ -1.68
PTCD3-214ENST00000483925 FAM237AA0A1B0GTK4 181 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 A0A1B0GTW7 788 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 A1L4Q6 167 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 SLC9B1P1A6NJY1 282 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 KDM4EB2RXH2 506 aaPredicted RBP4.52□□□□□ -1.69
PTCD3-214ENST00000483925 SLC30A4O14863 429 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 DSCR3O14972 297 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 PPM1DO15297 605 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 SEC14L5O43304 696 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 SPRY2O43597 315 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 PEX11AO75192 247 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 NKX2-2O95096 273 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 SNX4O95219 450 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 VNN1O95497 513 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 ADAP00813 363 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 SERPINC1P01008 464 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 TFP02787 698 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 OPN1MWP04001 364 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 OPN1MW2P0DN77 364 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 OPN1MW3P0DN78 364 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 SLC2A4P14672 509 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 MMP9P14780 707 aa4.52□□□□□ -1.69
PTCD3-214ENST00000483925 FERP16591 822 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms