RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 OR1E3Q8WZA6 343 aa19.87■□□□□ 0.77
HPS4-213ENST00000483631 MAML1Q92585 1016 aa19.87■□□□□ 0.77
HPS4-213ENST00000483631 FAF2Q96CS3 445 aa19.87■□□□□ 0.77
HPS4-213ENST00000483631 DTD2Q96FN9 168 aa19.87■□□□□ 0.77
HPS4-213ENST00000483631 TSGA13Q96PP4 275 aa19.87■□□□□ 0.77
HPS4-213ENST00000483631 TEX101Q9BY14 249 aa19.87■□□□□ 0.77
HPS4-213ENST00000483631 XPO4Q9C0E2 1151 aaKnown RBP19.87■□□□□ 0.77
HPS4-213ENST00000483631 POLR1EQ9GZS1 481 aaKnown RBP19.87■□□□□ 0.77
HPS4-213ENST00000483631 PHPT1Q9NRX4 125 aaPredicted RBP19.87■□□□□ 0.77
HPS4-213ENST00000483631 CTTNBP2NLQ9P2B4 639 aa19.87■□□□□ 0.77
HPS4-213ENST00000483631 GULP1Q9UBP9 304 aa19.87■□□□□ 0.77
HPS4-213ENST00000483631 CBFA2T2O43439 604 aa19.86■□□□□ 0.77
HPS4-213ENST00000483631 FZD6O60353 706 aa19.86■□□□□ 0.77
HPS4-213ENST00000483631 HOXB3P14651 431 aaPredicted RBP19.86■□□□□ 0.77
HPS4-213ENST00000483631 CCNCP24863 283 aa19.86■□□□□ 0.77
HPS4-213ENST00000483631 SSR1P43307 286 aaKnown RBP19.86■□□□□ 0.77
HPS4-213ENST00000483631 MAXP61244 160 aa19.86■□□□□ 0.77
HPS4-213ENST00000483631 TLE3Q04726 772 aa19.86■□□□□ 0.77
HPS4-213ENST00000483631 DPTQ07507 201 aa19.86■□□□□ 0.77
HPS4-213ENST00000483631 EIF3IQ13347 325 aaKnown RBP19.86■□□□□ 0.77
HPS4-213ENST00000483631 ARHGEF7Q14155 803 aa19.86■□□□□ 0.77
HPS4-213ENST00000483631 IFI16Q16666 785 aaKnown RBP19.86■□□□□ 0.77
HPS4-213ENST00000483631 NCBP2-AS2Q69YL0 99 aa19.86■□□□□ 0.77
HPS4-213ENST00000483631 NLRP8Q86W28 1048 aa19.86■□□□□ 0.77
HPS4-213ENST00000483631 SPACA3Q8IXA5 215 aa19.86■□□□□ 0.77
HPS4-213ENST00000483631 OR8K1Q8NGG5 319 aa19.86■□□□□ 0.77
HPS4-213ENST00000483631 WDR36Q8NI36 951 aaKnown RBP19.86■□□□□ 0.77
HPS4-213ENST00000483631 ATXN7L3BQ96GX2 97 aa19.86■□□□□ 0.77
HPS4-213ENST00000483631 LIN37Q96GY3 246 aaPredicted RBP19.86■□□□□ 0.77
HPS4-213ENST00000483631 SLC46A1Q96NT5 459 aa19.86■□□□□ 0.77
HPS4-213ENST00000483631 UBL7Q96S82 380 aaPredicted RBP19.86■□□□□ 0.77
HPS4-213ENST00000483631 LGMNQ99538 433 aa19.86■□□□□ 0.77
HPS4-213ENST00000483631 DNAJC7Q99615 494 aa19.86■□□□□ 0.77
HPS4-213ENST00000483631 APPL1Q9UKG1 709 aa19.86■□□□□ 0.77
HPS4-213ENST00000483631 DNPEPQ9ULA0 475 aa19.86■□□□□ 0.77
HPS4-213ENST00000483631 SATB2Q9UPW6 733 aa19.86■□□□□ 0.77
HPS4-213ENST00000483631 CCDC187A0A096LP49 1063 aa19.85■□□□□ 0.77
HPS4-213ENST00000483631 PRSS38A1L453 326 aa19.85■□□□□ 0.77
HPS4-213ENST00000483631 TTC24A2A3L6 582 aaPredicted RBP19.85■□□□□ 0.77
HPS4-213ENST00000483631 MATN3O15232 486 aa19.85■□□□□ 0.77
HPS4-213ENST00000483631 MFSD11O43934 449 aa19.85■□□□□ 0.77
HPS4-213ENST00000483631 CD48P09326 243 aa19.85■□□□□ 0.77
HPS4-213ENST00000483631 GLB1P16278 677 aa19.85■□□□□ 0.77
HPS4-213ENST00000483631 ZNF30P17039 623 aa19.85■□□□□ 0.77
HPS4-213ENST00000483631 MX2P20592 715 aa19.85■□□□□ 0.77
HPS4-213ENST00000483631 LHCGRP22888 699 aa19.85■□□□□ 0.77
HPS4-213ENST00000483631 RBMS1P29558 406 aaKnown RBP19.85■□□□□ 0.77
HPS4-213ENST00000483631 UCNP55089 124 aa19.85■□□□□ 0.77
HPS4-213ENST00000483631 MMRN1Q13201 1228 aa19.85■□□□□ 0.77
HPS4-213ENST00000483631 COL9A2Q14055 689 aaPredicted RBP19.85■□□□□ 0.77
HPS4-213ENST00000483631 ASTE1Q2TB18 679 aaPredicted RBP19.85■□□□□ 0.77
HPS4-213ENST00000483631 ANKRD20A8PQ5CZ79 823 aa19.85■□□□□ 0.77
HPS4-213ENST00000483631 SPECC1LQ69YQ0 1117 aa19.85■□□□□ 0.77
HPS4-213ENST00000483631 TAF8Q7Z7C8 310 aa19.85■□□□□ 0.77
HPS4-213ENST00000483631 VSIG1Q86XK7 387 aa19.85■□□□□ 0.77
HPS4-213ENST00000483631 KCTD6Q8NC69 237 aa19.85■□□□□ 0.77
HPS4-213ENST00000483631 PIH1D2Q8WWB5 315 aa19.85■□□□□ 0.77
HPS4-213ENST00000483631 CCDC74AQ96AQ1 378 aa19.85■□□□□ 0.77
HPS4-213ENST00000483631 LGR4Q9BXB1 951 aa19.85■□□□□ 0.77
HPS4-213ENST00000483631 DPH1Q9BZG8 443 aa19.85■□□□□ 0.77
HPS4-213ENST00000483631 NT5MQ9NPB1 228 aa19.85■□□□□ 0.77
HPS4-213ENST00000483631 RAI2Q9Y5P3 530 aa19.85■□□□□ 0.77
HPS4-213ENST00000483631 NPIPB15A6NHN6 443 aaPredicted RBP19.84■□□□□ 0.77
HPS4-213ENST00000483631 A8MX80 341 aa19.84■□□□□ 0.77
HPS4-213ENST00000483631 ZNF487B1APH4 448 aa19.84■□□□□ 0.77
HPS4-213ENST00000483631 PYGLP06737 847 aa19.84■□□□□ 0.77
HPS4-213ENST00000483631 TMEM253P0C7T8 217 aa19.84■□□□□ 0.77
HPS4-213ENST00000483631 CA4P22748 312 aa19.84■□□□□ 0.77
HPS4-213ENST00000483631 PDX1P52945 283 aa19.84■□□□□ 0.77
HPS4-213ENST00000483631 SKOR1P84550 965 aa19.84■□□□□ 0.77
HPS4-213ENST00000483631 CCDC173Q0VFZ6 552 aa19.84■□□□□ 0.77
HPS4-213ENST00000483631 PEX6Q13608 980 aa19.84■□□□□ 0.77
HPS4-213ENST00000483631 C3orf38Q5JPI3 329 aa19.84■□□□□ 0.77
HPS4-213ENST00000483631 CERCAMQ5T4B2 595 aa19.84■□□□□ 0.77
HPS4-213ENST00000483631 KCTD16Q68DU8 428 aa19.84■□□□□ 0.77
HPS4-213ENST00000483631 CRTC1Q6UUV9 634 aa19.84■□□□□ 0.77
HPS4-213ENST00000483631 ARL14Q8N4G2 192 aa19.84■□□□□ 0.77
HPS4-213ENST00000483631 LSM14AQ8ND56 463 aaKnown RBP19.84■□□□□ 0.77
HPS4-213ENST00000483631 KIAA1524Q8TCG1 905 aa19.84■□□□□ 0.77
HPS4-213ENST00000483631 CCDC97Q96F63 343 aaPredicted RBP19.84■□□□□ 0.77
HPS4-213ENST00000483631 CRELD1Q96HD1 420 aa19.84■□□□□ 0.77
HPS4-213ENST00000483631 PRR11Q96HE9 360 aaPredicted RBP19.84■□□□□ 0.77
HPS4-213ENST00000483631 SEMA3CQ99985 751 aa19.84■□□□□ 0.77
HPS4-213ENST00000483631 CYP4F12Q9HCS2 524 aa19.84■□□□□ 0.77
HPS4-213ENST00000483631 ZNHIT6Q9NWK9 470 aaKnown RBP19.84■□□□□ 0.77
HPS4-213ENST00000483631 TRNAU1APQ9NX07 287 aaKnown RBP19.84■□□□□ 0.77
HPS4-213ENST00000483631 SIRPGQ9P1W8 387 aa19.84■□□□□ 0.77
HPS4-213ENST00000483631 BPTFQ12830 3046 aa19.84■□□□□ 0.77
HPS4-213ENST00000483631 TEX51A0A1B0GUA7 166 aa19.83■□□□□ 0.77
HPS4-213ENST00000483631 CDRT15L2A8MXV6 281 aa19.83■□□□□ 0.77
HPS4-213ENST00000483631 D6RAR5 112 aa19.83■□□□□ 0.77
HPS4-213ENST00000483631 TK2O00142 265 aa19.83■□□□□ 0.77
HPS4-213ENST00000483631 NUDT21O43809 227 aaKnown RBP19.83■□□□□ 0.77
HPS4-213ENST00000483631 NOBOXO60393 691 aa19.83■□□□□ 0.77
HPS4-213ENST00000483631 CCKBRP32239 447 aa19.83■□□□□ 0.77
HPS4-213ENST00000483631 ETV3P41162 512 aa19.83■□□□□ 0.77
HPS4-213ENST00000483631 RPL26P61254 145 aaKnown RBP19.83■□□□□ 0.77
HPS4-213ENST00000483631 CDK3Q00526 305 aa19.83■□□□□ 0.77
HPS4-213ENST00000483631 ATP13A4Q4VNC1 1196 aa19.83■□□□□ 0.77
HPS4-213ENST00000483631 C14orf28Q4W4Y0 310 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms