RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 NR3C2P08235 984 aa11.83□□□□□ -0.52
VTI1A-205ENST00000483122 GPX3P22352 226 aa11.83□□□□□ -0.52
VTI1A-205ENST00000483122 KCNA5P22460 613 aa11.83□□□□□ -0.52
VTI1A-205ENST00000483122 CXCR2P25025 360 aa11.83□□□□□ -0.52
VTI1A-205ENST00000483122 CD40LGP29965 261 aa11.83□□□□□ -0.52
VTI1A-205ENST00000483122 GP2P55259 537 aaKnown RBP11.83□□□□□ -0.52
VTI1A-205ENST00000483122 TSPY1Q01534 308 aa11.83□□□□□ -0.52
VTI1A-205ENST00000483122 SLC6A3Q01959 620 aa11.83□□□□□ -0.52
VTI1A-205ENST00000483122 CATSPEREQ5SY80 951 aa11.83□□□□□ -0.52
VTI1A-205ENST00000483122 CLEC6AQ6EIG7 209 aa11.83□□□□□ -0.52
VTI1A-205ENST00000483122 ZNF280DQ6N043 979 aa11.83□□□□□ -0.52
VTI1A-205ENST00000483122 ZPBP2Q6X784 338 aa11.83□□□□□ -0.52
VTI1A-205ENST00000483122 CYHR1Q6ZMK1 362 aa11.83□□□□□ -0.52
VTI1A-205ENST00000483122 CUZD1Q86UP6 607 aa11.83□□□□□ -0.52
VTI1A-205ENST00000483122 VSIG10LQ86VR7 867 aa11.83□□□□□ -0.52
VTI1A-205ENST00000483122 MFSD6LQ8IWD5 586 aa11.83□□□□□ -0.52
VTI1A-205ENST00000483122 CDAN1Q8IWY9 1227 aa11.83□□□□□ -0.52
VTI1A-205ENST00000483122 LGI2Q8N0V4 545 aa11.83□□□□□ -0.52
VTI1A-205ENST00000483122 C1orf127Q8N9H9 656 aa11.83□□□□□ -0.52
VTI1A-205ENST00000483122 DNERQ8NFT8 737 aa11.83□□□□□ -0.52
VTI1A-205ENST00000483122 CLEC4CQ8WTT0 213 aa11.83□□□□□ -0.52
VTI1A-205ENST00000483122 SEPHS2Q99611 448 aa11.83□□□□□ -0.52
VTI1A-205ENST00000483122 RNF38Q9H0F5 515 aa11.83□□□□□ -0.52
VTI1A-205ENST00000483122 DKK3Q9UBP4 350 aa11.83□□□□□ -0.52
VTI1A-205ENST00000483122 ACOT9Q9Y305 439 aa11.83□□□□□ -0.52
VTI1A-205ENST00000483122 A0A0J9YYE9 177 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 GLTPD2A6NH11 291 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 FARP2O94887 1054 aaPredicted RBP11.82□□□□□ -0.52
VTI1A-205ENST00000483122 KCNK2O95069 426 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 LDLRP01130 860 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 AHSGP02765 367 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 GPIP06744 558 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 FCGR1AP12314 374 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 CAPN3P20807 821 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 GMPSP49915 693 aaPredicted RBP11.82□□□□□ -0.52
VTI1A-205ENST00000483122 APLP1P51693 650 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 NDST1P52848 882 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 BNIP2Q12982 314 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 SURF1Q15526 300 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 GOLGA7BQ2TAP0 167 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 TAS2R42Q7RTR8 314 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 PIWIL4Q7Z3Z4 852 aaKnown RBP11.82□□□□□ -0.52
VTI1A-205ENST00000483122 EXOC8Q8IYI6 725 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 OR6Q1Q8NGQ2 317 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 TP53INP1Q96A56 240 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 GPRASP2Q96D09 838 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 MRPL4Q9BYD3 311 aaKnown RBP11.82□□□□□ -0.52
VTI1A-205ENST00000483122 RHOJQ9H4E5 214 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 PRDM12Q9H4Q4 367 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 NEK6Q9HC98 313 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 TBC1D14Q9P2M4 693 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 GIMAP2Q9UG22 337 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 ZNF639Q9UID6 485 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 PCDHGA11Q9Y5H2 935 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 WDR90Q96KV7 1748 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 SNPHO15079 494 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 DEAF1O75398 565 aaPredicted RBP11.82□□□□□ -0.52
VTI1A-205ENST00000483122 ITGB3P05106 788 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 NFICP08651 508 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 SUPT20HL2P0C7V6 817 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 SPNP16150 400 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 TSPAN8P19075 237 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 BDNFP23560 247 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 SLC6A2P23975 617 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 PLK1P53350 603 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 COPZ1P61923 177 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 BAATQ14032 418 aaPredicted RBP11.82□□□□□ -0.52
VTI1A-205ENST00000483122 SNX17Q15036 470 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 MEP1AQ16819 746 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 ADPRMQ3LIE5 342 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 UGT3A2Q3SY77 523 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 SUPT20HL1Q3ZLR7 823 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 RBM48Q5RL73 367 aaKnown RBP11.82□□□□□ -0.52
VTI1A-205ENST00000483122 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.82□□□□□ -0.52
VTI1A-205ENST00000483122 THAP5Q7Z6K1 395 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 PSTKQ8IV42 348 aaKnown RBP11.82□□□□□ -0.52
VTI1A-205ENST00000483122 OR7G1Q8NGA0 311 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 HEXDCQ8WVB3 486 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 C3orf30Q96M34 536 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 HOPXQ9BPY8 73 aaPredicted RBP11.82□□□□□ -0.52
VTI1A-205ENST00000483122 MRPL46Q9H2W6 279 aaKnown RBP11.82□□□□□ -0.52
VTI1A-205ENST00000483122 MOV10Q9HCE1 1003 aaKnown RBP11.82□□□□□ -0.52
VTI1A-205ENST00000483122 CASS4Q9NQ75 786 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 FBXO8Q9NRD0 319 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 TMPRSS4Q9NRS4 437 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 ANAPC2Q9UJX6 822 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 USP22Q9UPT9 525 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 UTRNP46939 3433 aa11.82□□□□□ -0.52
VTI1A-205ENST00000483122 CLRN2A0PK11 232 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 HOXC11O43248 304 aaPredicted RBP11.81□□□□□ -0.52
VTI1A-205ENST00000483122 ASNA1O43681 348 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 DDNO94850 711 aaPredicted RBP11.81□□□□□ -0.52
VTI1A-205ENST00000483122 AP2A1O95782 977 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 CXCL8P10145 99 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 TCF3P15923 654 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 GLUD2P49448 558 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 CDC20Q12834 499 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 LAMC2Q13753 1193 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 FRG1Q14331 258 aaKnown RBP11.81□□□□□ -0.52
VTI1A-205ENST00000483122 KIF19Q2TAC6 998 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms