RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 HTRA2O43464 458 aaPredicted RBP16.59■□□□□ 0.25
RAB11FIP3-209ENST00000483002 NOBOXO60393 691 aa16.59■□□□□ 0.25
RAB11FIP3-209ENST00000483002 MAFKO60675 156 aa16.59■□□□□ 0.25
RAB11FIP3-209ENST00000483002 SOCS5O75159 536 aa16.59■□□□□ 0.25
RAB11FIP3-209ENST00000483002 ZIC2O95409 532 aaPredicted RBP16.59■□□□□ 0.25
RAB11FIP3-209ENST00000483002 PEX11BO96011 259 aa16.59■□□□□ 0.25
RAB11FIP3-209ENST00000483002 CPP00450 1065 aa16.59■□□□□ 0.25
RAB11FIP3-209ENST00000483002 CR2P20023 1033 aa16.59■□□□□ 0.25
RAB11FIP3-209ENST00000483002 SLC5A2P31639 672 aa16.59■□□□□ 0.25
RAB11FIP3-209ENST00000483002 VIPR1P32241 457 aa16.59■□□□□ 0.25
RAB11FIP3-209ENST00000483002 HSPA9P38646 679 aaKnown RBP16.59■□□□□ 0.25
RAB11FIP3-209ENST00000483002 MAXP61244 160 aa16.59■□□□□ 0.25
RAB11FIP3-209ENST00000483002 CLN3Q13286 438 aa16.59■□□□□ 0.25
RAB11FIP3-209ENST00000483002 EIF3IQ13347 325 aaKnown RBP16.59■□□□□ 0.25
RAB11FIP3-209ENST00000483002 PIGHQ14442 188 aaPredicted RBP16.59■□□□□ 0.25
RAB11FIP3-209ENST00000483002 NR1I3Q14994 352 aa16.59■□□□□ 0.25
RAB11FIP3-209ENST00000483002 CNGA3Q16281 694 aa16.59■□□□□ 0.25
RAB11FIP3-209ENST00000483002 C14orf28Q4W4Y0 310 aa16.59■□□□□ 0.25
RAB11FIP3-209ENST00000483002 TDRD12Q587J7 1177 aaKnown RBP16.59■□□□□ 0.25
RAB11FIP3-209ENST00000483002 CERCAMQ5T4B2 595 aa16.59■□□□□ 0.25
RAB11FIP3-209ENST00000483002 TXNRD3NBQ6F5E7 133 aa16.59■□□□□ 0.25
RAB11FIP3-209ENST00000483002 BBS5Q8N3I7 341 aa16.59■□□□□ 0.25
RAB11FIP3-209ENST00000483002 NSMCE1Q8WV22 266 aa16.59■□□□□ 0.25
RAB11FIP3-209ENST00000483002 SNRNP27Q8WVK2 155 aaKnown RBP16.59■□□□□ 0.25
RAB11FIP3-209ENST00000483002 CARS2Q9HA77 564 aaKnown RBP16.59■□□□□ 0.25
RAB11FIP3-209ENST00000483002 APPL1Q9UKG1 709 aa16.59■□□□□ 0.25
RAB11FIP3-209ENST00000483002 RNF215Q9Y6U7 377 aa16.59■□□□□ 0.25
RAB11FIP3-209ENST00000483002 COL6A6A6NMZ7 2263 aa16.59■□□□□ 0.25
RAB11FIP3-209ENST00000483002 ZNF462Q96JM2 2506 aa16.58■□□□□ 0.25
RAB11FIP3-209ENST00000483002 GOLGA6CA6NDK9 693 aa16.58■□□□□ 0.24
RAB11FIP3-209ENST00000483002 GOLGA6BA6NDN3 693 aa16.58■□□□□ 0.24
RAB11FIP3-209ENST00000483002 K7ENP7 123 aa16.58■□□□□ 0.24
RAB11FIP3-209ENST00000483002 HEXIM1O94992 359 aaKnown RBP16.58■□□□□ 0.24
RAB11FIP3-209ENST00000483002 JMJD7P0C870 316 aa16.58■□□□□ 0.24
RAB11FIP3-209ENST00000483002 GOLGA6DP0CG33 693 aa16.58■□□□□ 0.24
RAB11FIP3-209ENST00000483002 MYCLP1P12525 358 aaPredicted RBP16.58■□□□□ 0.24
RAB11FIP3-209ENST00000483002 NFKBIAP25963 317 aa16.58■□□□□ 0.24
RAB11FIP3-209ENST00000483002 CCKBRP32239 447 aa16.58■□□□□ 0.24
RAB11FIP3-209ENST00000483002 ETV3P41162 512 aa16.58■□□□□ 0.24
RAB11FIP3-209ENST00000483002 TRAF2Q12933 501 aa16.58■□□□□ 0.24
RAB11FIP3-209ENST00000483002 LY6DQ14210 128 aa16.58■□□□□ 0.24
RAB11FIP3-209ENST00000483002 PTPRRQ15256 657 aa16.58■□□□□ 0.24
RAB11FIP3-209ENST00000483002 TSR1Q2NL82 804 aaKnown RBP16.58■□□□□ 0.24
RAB11FIP3-209ENST00000483002 MARC1Q5VT66 337 aa16.58■□□□□ 0.24
RAB11FIP3-209ENST00000483002 KIAA1614Q5VZ46 1190 aa16.58■□□□□ 0.24
RAB11FIP3-209ENST00000483002 SPECC1LQ69YQ0 1117 aa16.58■□□□□ 0.24
RAB11FIP3-209ENST00000483002 CAVIN1Q6NZI2 390 aaKnown RBP16.58■□□□□ 0.24
RAB11FIP3-209ENST00000483002 INO80CQ6PI98 192 aaPredicted RBP16.58■□□□□ 0.24
RAB11FIP3-209ENST00000483002 HSD11B1LQ7Z5J1 315 aa16.58■□□□□ 0.24
RAB11FIP3-209ENST00000483002 HEATR4Q86WZ0 1026 aa16.58■□□□□ 0.24
RAB11FIP3-209ENST00000483002 ATPAF2Q8N5M1 289 aa16.58■□□□□ 0.24
RAB11FIP3-209ENST00000483002 SPOCK2Q92563 424 aa16.58■□□□□ 0.24
RAB11FIP3-209ENST00000483002 WBP1Q96G27 269 aa16.58■□□□□ 0.24
RAB11FIP3-209ENST00000483002 BTBD6Q96KE9 485 aa16.58■□□□□ 0.24
RAB11FIP3-209ENST00000483002 MGME1Q9BQP7 344 aa16.58■□□□□ 0.24
RAB11FIP3-209ENST00000483002 PHPT1Q9NRX4 125 aaPredicted RBP16.58■□□□□ 0.24
RAB11FIP3-209ENST00000483002 SPATS2LQ9NUQ6 558 aaKnown RBP16.58■□□□□ 0.24
RAB11FIP3-209ENST00000483002 GOLGA6AQ9NYA3 693 aa16.58■□□□□ 0.24
RAB11FIP3-209ENST00000483002 PISDQ9UG56 409 aa16.58■□□□□ 0.24
RAB11FIP3-209ENST00000483002 PHTF1Q9UMS5 762 aa16.58■□□□□ 0.24
RAB11FIP3-209ENST00000483002 FUCA1P04066 466 aa16.57■□□□□ 0.24
RAB11FIP3-209ENST00000483002 CEACAM5P06731 702 aa16.57■□□□□ 0.24
RAB11FIP3-209ENST00000483002 CYP2A6P11509 494 aaPredicted RBP16.57■□□□□ 0.24
RAB11FIP3-209ENST00000483002 CCNB1P14635 433 aa16.57■□□□□ 0.24
RAB11FIP3-209ENST00000483002 PNLIPP16233 465 aa16.57■□□□□ 0.24
RAB11FIP3-209ENST00000483002 SSR1P43307 286 aaKnown RBP16.57■□□□□ 0.24
RAB11FIP3-209ENST00000483002 MMP13P45452 471 aa16.57■□□□□ 0.24
RAB11FIP3-209ENST00000483002 HLTFQ14527 1009 aaKnown RBP eCLIP16.57■□□□□ 0.24
RAB11FIP3-209ENST00000483002 IQCB1Q15051 598 aa16.57■□□□□ 0.24
RAB11FIP3-209ENST00000483002 Q6ZVL8 140 aa16.57■□□□□ 0.24
RAB11FIP3-209ENST00000483002 SPRED1Q7Z699 444 aa16.57■□□□□ 0.24
RAB11FIP3-209ENST00000483002 CBARPQ8N350 705 aaPredicted RBP16.57■□□□□ 0.24
RAB11FIP3-209ENST00000483002 KIAA1524Q8TCG1 905 aa16.57■□□□□ 0.24
RAB11FIP3-209ENST00000483002 TTC9Q92623 222 aa16.57■□□□□ 0.24
RAB11FIP3-209ENST00000483002 DTD2Q96FN9 168 aa16.57■□□□□ 0.24
RAB11FIP3-209ENST00000483002 CCNL2Q96S94 520 aaPredicted RBP16.57■□□□□ 0.24
RAB11FIP3-209ENST00000483002 TEX101Q9BY14 249 aa16.57■□□□□ 0.24
RAB11FIP3-209ENST00000483002 THAP2Q9H0W7 228 aa16.57■□□□□ 0.24
RAB11FIP3-209ENST00000483002 PCDH18Q9HCL0 1135 aa16.57■□□□□ 0.24
RAB11FIP3-209ENST00000483002 KCTD5Q9NXV2 234 aa16.57■□□□□ 0.24
RAB11FIP3-209ENST00000483002 LOXL2Q9Y4K0 774 aa16.57■□□□□ 0.24
RAB11FIP3-209ENST00000483002 PCDHGA7Q9Y5G6 932 aa16.57■□□□□ 0.24
RAB11FIP3-209ENST00000483002 A0A0U1RQS6 177 aa16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 NPIPB15A6NHN6 443 aaPredicted RBP16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 NUDT21O43809 227 aaKnown RBP16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 PGLSO95336 258 aa16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 PLA2G2AP14555 144 aa16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 CTPS1P17812 591 aa16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 ITIH1P19827 911 aa16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 LHCGRP22888 699 aa16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 SERPINB6P35237 376 aa16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 GNPDA1P46926 289 aa16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 CDH6P55285 790 aa16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 MAZP56270 477 aaKnown RBP16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 ZFP36L1Q07352 338 aaKnown RBP16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 ITKQ08881 620 aa16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 ILF3Q12906 894 aaKnown RBP eCLIP16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 MMRN1Q13201 1228 aa16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 KRT81Q14533 505 aa16.56■□□□□ 0.24
RAB11FIP3-209ENST00000483002 TGIF1Q15583 401 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms