RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 SPPL2BQ8TCT7 592 aa14.33□□□□□ -0.12
COL9A2-207ENST00000482722 LPPQ93052 612 aa14.33□□□□□ -0.12
COL9A2-207ENST00000482722 ALPK1Q96QP1 1244 aa14.33□□□□□ -0.12
COL9A2-207ENST00000482722 OLFM1Q99784 485 aa14.33□□□□□ -0.12
COL9A2-207ENST00000482722 FTHL17Q9BXU8 183 aa14.33□□□□□ -0.12
COL9A2-207ENST00000482722 DNAI2Q9GZS0 605 aa14.33□□□□□ -0.12
COL9A2-207ENST00000482722 FANCEQ9HB96 536 aa14.33□□□□□ -0.12
COL9A2-207ENST00000482722 AGPAT4Q9NRZ5 378 aa14.33□□□□□ -0.12
COL9A2-207ENST00000482722 ST14Q9Y5Y6 855 aa14.33□□□□□ -0.12
COL9A2-207ENST00000482722 B4GAT1O43505 415 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 SNRPB2P08579 225 aaKnown RBP14.32□□□□□ -0.12
COL9A2-207ENST00000482722 HSPA8P11142 646 aaKnown RBP14.32□□□□□ -0.12
COL9A2-207ENST00000482722 TSPAN8P19075 237 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 TAF6P49848 677 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 TKTL1P51854 596 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 MPP1Q00013 466 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 MAPRE2Q15555 327 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 PERM1Q5SV97 790 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 TSTD2Q5T7W7 516 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 SAPCD2Q86UD0 394 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 CRYBG2Q8N1P7 616 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 TRPV1Q8NER1 839 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 BPIFB6Q8NFQ5 453 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 EDEM1Q92611 657 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 HPS1Q92902 700 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 CELF6Q96J87 481 aaKnown RBP14.32□□□□□ -0.12
COL9A2-207ENST00000482722 FEM1CQ96JP0 617 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 CCDC138Q96M89 665 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 STAP1Q9ULZ2 295 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 SLC27A5Q9Y2P5 690 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 ZSWIM8A7E2V4 1837 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 TARM1B6A8C7 271 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 C9JVG2 144 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 EI24O14681 340 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 AP2A1O95782 977 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 F2P00734 622 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 AHSGP02765 367 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 OPRL1P41146 370 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 GLUD2P49448 558 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 PRKAA2P54646 552 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 TPI1P60174 286 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 SQLEQ14534 574 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 SNX17Q15036 470 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 ATP6AP1Q15904 470 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 THOC7Q6I9Y2 204 aaKnown RBP14.32□□□□□ -0.12
COL9A2-207ENST00000482722 DNAJC14Q6Y2X3 702 aaPredicted RBP14.32□□□□□ -0.12
COL9A2-207ENST00000482722 ZNF467Q7Z7K2 595 aaPredicted RBP14.32□□□□□ -0.12
COL9A2-207ENST00000482722 ZC3HC1Q86WB0 502 aaKnown RBP14.32□□□□□ -0.12
COL9A2-207ENST00000482722 CMTR2Q8IYT2 770 aaKnown RBP14.32□□□□□ -0.12
COL9A2-207ENST00000482722 LRCH3Q96II8 777 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 HSFY1Q96LI6 401 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 CSF3RQ99062 836 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 MLPHQ9BV36 600 aaPredicted RBP14.32□□□□□ -0.12
COL9A2-207ENST00000482722 IFT80Q9P2H3 777 aaPredicted RBP14.32□□□□□ -0.12
COL9A2-207ENST00000482722 EGFL7Q9UHF1 273 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 DHRS12A0PJE2 317 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 UBDO15205 165 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 PSEN2P49810 448 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 TMBIM6P55061 237 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 C1QTNF8P60827 252 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 KCNJ8Q15842 424 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 WSCD1Q658N2 575 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 COLGALT2Q8IYK4 626 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 NPWQ8N729 165 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 SNX19Q92543 992 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 TNIP3Q96KP6 325 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 RPL10LQ96L21 214 aaKnown RBP14.32□□□□□ -0.12
COL9A2-207ENST00000482722 GLT1D1Q96MS3 346 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 C9orf16Q9BUW7 83 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 MROQ9BYG7 248 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 ULBP1Q9BZM6 244 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 TRIM8Q9BZR9 551 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 SEPT3Q9UH03 358 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 VPS51Q9UID3 782 aa14.32□□□□□ -0.12
COL9A2-207ENST00000482722 CCDC162PA2VCL2 907 aa14.31□□□□□ -0.12
COL9A2-207ENST00000482722 YJEFN3A6XGL0 299 aa14.31□□□□□ -0.12
COL9A2-207ENST00000482722 PIRO00625 290 aa14.31□□□□□ -0.12
COL9A2-207ENST00000482722 ACOX3O15254 700 aa14.31□□□□□ -0.12
COL9A2-207ENST00000482722 NRP2O60462 931 aa14.31□□□□□ -0.12
COL9A2-207ENST00000482722 NCAM1P13591 858 aa14.31□□□□□ -0.12
COL9A2-207ENST00000482722 DARSP14868 501 aaKnown RBP14.31□□□□□ -0.12
COL9A2-207ENST00000482722 NFKB1P19838 968 aa14.31□□□□□ -0.12
COL9A2-207ENST00000482722 NOS2P35228 1153 aa14.31□□□□□ -0.12
COL9A2-207ENST00000482722 RCVRNP35243 200 aa14.31□□□□□ -0.12
COL9A2-207ENST00000482722 CAPGP40121 348 aa14.31□□□□□ -0.12
COL9A2-207ENST00000482722 GJA9P57773 515 aa14.31□□□□□ -0.12
COL9A2-207ENST00000482722 BFSP2Q13515 415 aa14.31□□□□□ -0.12
COL9A2-207ENST00000482722 PAN2Q504Q3 1202 aaKnown RBP14.31□□□□□ -0.12
COL9A2-207ENST00000482722 CYBRD1Q53TN4 286 aa14.31□□□□□ -0.12
COL9A2-207ENST00000482722 IRAK1BP1Q5VVH5 260 aa14.31□□□□□ -0.12
COL9A2-207ENST00000482722 C8orf82Q6P1X6 216 aaPredicted RBP14.31□□□□□ -0.12
COL9A2-207ENST00000482722 KDELC2Q7Z4H8 507 aa14.31□□□□□ -0.12
COL9A2-207ENST00000482722 DHRSXQ8N5I4 330 aa14.31□□□□□ -0.12
COL9A2-207ENST00000482722 TXNDC5Q8NBS9 432 aaKnown RBP14.31□□□□□ -0.12
COL9A2-207ENST00000482722 GTF3C2Q8WUA4 911 aaPredicted RBP14.31□□□□□ -0.12
COL9A2-207ENST00000482722 ZNF560Q96MR9 790 aa14.31□□□□□ -0.12
COL9A2-207ENST00000482722 MCMBPQ9BTE3 642 aa14.31□□□□□ -0.12
COL9A2-207ENST00000482722 SEZ6LQ9BYH1 1024 aa14.31□□□□□ -0.12
COL9A2-207ENST00000482722 OSBPL2Q9H1P3 480 aa14.31□□□□□ -0.12
COL9A2-207ENST00000482722 POMKQ9H5K3 350 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms