RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 OXNAD1Q96HP4 312 aaPredicted RBP20.93■□□□□ 0.94
SEC13-217ENST00000482647 PBKQ96KB5 322 aa20.93■□□□□ 0.94
SEC13-217ENST00000482647 SRPK1Q96SB4 655 aaKnown RBP20.93■□□□□ 0.94
SEC13-217ENST00000482647 TMEM121Q9BTD3 319 aa20.93■□□□□ 0.94
SEC13-217ENST00000482647 GPR27Q9NS67 375 aa20.93■□□□□ 0.94
SEC13-217ENST00000482647 ZKSCAN5Q9Y2L8 839 aa20.93■□□□□ 0.94
SEC13-217ENST00000482647 AAR2Q9Y312 384 aaKnown RBP20.93■□□□□ 0.94
SEC13-217ENST00000482647 PLXNA2O75051 1894 aa20.92■□□□□ 0.94
SEC13-217ENST00000482647 SPTY2D1-AS1A0A0U1RR47 76 aa20.92■□□□□ 0.94
SEC13-217ENST00000482647 LOC285095A0A1B0GVY8 99 aa20.92■□□□□ 0.94
SEC13-217ENST00000482647 USP27XA6NNY8 438 aa20.92■□□□□ 0.94
SEC13-217ENST00000482647 PCDHGA12O60330 932 aa20.92■□□□□ 0.94
SEC13-217ENST00000482647 GCATO75600 419 aa20.92■□□□□ 0.94
SEC13-217ENST00000482647 PCCBP05166 539 aa20.92■□□□□ 0.94
SEC13-217ENST00000482647 CD59P13987 128 aa20.92■□□□□ 0.94
SEC13-217ENST00000482647 ETV3P41162 512 aa20.92■□□□□ 0.94
SEC13-217ENST00000482647 THOP1P52888 689 aa20.92■□□□□ 0.94
SEC13-217ENST00000482647 GEMP55040 296 aa20.92■□□□□ 0.94
SEC13-217ENST00000482647 PDE1CQ14123 709 aaPredicted RBP20.92■□□□□ 0.94
SEC13-217ENST00000482647 CCNG2Q16589 344 aa20.92■□□□□ 0.94
SEC13-217ENST00000482647 ARHGEF18Q6ZSZ5 1173 aa20.92■□□□□ 0.94
SEC13-217ENST00000482647 Q6ZVL8 140 aa20.92■□□□□ 0.94
SEC13-217ENST00000482647 RAVER1Q8IY67 606 aaKnown RBP20.92■□□□□ 0.94
SEC13-217ENST00000482647 CCHCR1Q8TD31 782 aa20.92■□□□□ 0.94
SEC13-217ENST00000482647 C1orf54Q8WWF1 131 aa20.92■□□□□ 0.94
SEC13-217ENST00000482647 DTD2Q96FN9 168 aa20.92■□□□□ 0.94
SEC13-217ENST00000482647 MAGEE1Q9HCI5 957 aa20.92■□□□□ 0.94
SEC13-217ENST00000482647 ZNF148Q9UQR1 794 aa20.92■□□□□ 0.94
SEC13-217ENST00000482647 C1orf232A0A0U1RR37 186 aa20.91■□□□□ 0.94
SEC13-217ENST00000482647 CLDN7O95471 211 aa20.91■□□□□ 0.94
SEC13-217ENST00000482647 MTM1Q13496 603 aa20.91■□□□□ 0.94
SEC13-217ENST00000482647 SNX1Q13596 522 aa20.91■□□□□ 0.94
SEC13-217ENST00000482647 OASLQ15646 514 aaKnown RBP20.91■□□□□ 0.94
SEC13-217ENST00000482647 PARP6Q2NL67 630 aa20.91■□□□□ 0.94
SEC13-217ENST00000482647 TECPR1Q7Z6L1 1165 aa20.91■□□□□ 0.94
SEC13-217ENST00000482647 IPMKQ8NFU5 416 aa20.91■□□□□ 0.94
SEC13-217ENST00000482647 LRRC45Q96CN5 670 aa20.91■□□□□ 0.94
SEC13-217ENST00000482647 MRGPRX2Q96LB1 330 aa20.91■□□□□ 0.94
SEC13-217ENST00000482647 FSD1LQ9BXM9 530 aa20.91■□□□□ 0.94
SEC13-217ENST00000482647 HOMER3Q9NSC5 361 aa20.91■□□□□ 0.94
SEC13-217ENST00000482647 DNAH14Q0VDD8 3507 aa20.91■□□□□ 0.94
SEC13-217ENST00000482647 ANKRD36A6QL64 1941 aa20.9■□□□□ 0.94
SEC13-217ENST00000482647 A0A0U1RQS6 177 aa20.9■□□□□ 0.94
SEC13-217ENST00000482647 DCDC2BA2VCK2 349 aa20.9■□□□□ 0.94
SEC13-217ENST00000482647 ATP1A1P05023 1023 aaKnown RBP20.9■□□□□ 0.94
SEC13-217ENST00000482647 PSMB4P28070 264 aa20.9■□□□□ 0.94
SEC13-217ENST00000482647 HTR1BP28222 390 aa20.9■□□□□ 0.94
SEC13-217ENST00000482647 STC1P52823 247 aa20.9■□□□□ 0.94
SEC13-217ENST00000482647 IL9RQ01113 521 aa20.9■□□□□ 0.94
SEC13-217ENST00000482647 FZD2Q14332 565 aa20.9■□□□□ 0.94
SEC13-217ENST00000482647 SHBQ15464 509 aa20.9■□□□□ 0.94
SEC13-217ENST00000482647 SIX1Q15475 284 aaPredicted RBP20.9■□□□□ 0.94
SEC13-217ENST00000482647 CDKN3Q16667 212 aa20.9■□□□□ 0.94
SEC13-217ENST00000482647 ESRP1Q6NXG1 681 aaKnown RBP20.9■□□□□ 0.94
SEC13-217ENST00000482647 PNCKQ6P2M8 343 aa20.9■□□□□ 0.94
SEC13-217ENST00000482647 KDM7AQ6ZMT4 941 aa20.9■□□□□ 0.94
SEC13-217ENST00000482647 DBX2Q6ZNG2 339 aa20.9■□□□□ 0.94
SEC13-217ENST00000482647 PARGQ86W56 976 aa20.9■□□□□ 0.94
SEC13-217ENST00000482647 NRSN1Q8IZ57 195 aa20.9■□□□□ 0.94
SEC13-217ENST00000482647 PLA2G15Q8NCC3 412 aa20.9■□□□□ 0.94
SEC13-217ENST00000482647 RTP4Q96DX8 246 aa20.9■□□□□ 0.94
SEC13-217ENST00000482647 APOOQ9BUR5 198 aa20.9■□□□□ 0.94
SEC13-217ENST00000482647 SLC32A1Q9H598 525 aa20.9■□□□□ 0.94
SEC13-217ENST00000482647 OR1A2Q9Y585 309 aa20.9■□□□□ 0.94
SEC13-217ENST00000482647 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.9■□□□□ 0.94
SEC13-217ENST00000482647 DCHS1Q96JQ0 3298 aa20.9■□□□□ 0.94
SEC13-217ENST00000482647 DOCK9Q9BZ29 2069 aa20.9■□□□□ 0.94
SEC13-217ENST00000482647 RGSL1A5PLK6 1076 aa20.89■□□□□ 0.93
SEC13-217ENST00000482647 GOLGA6CA6NDK9 693 aa20.89■□□□□ 0.93
SEC13-217ENST00000482647 GOLGA6BA6NDN3 693 aa20.89■□□□□ 0.93
SEC13-217ENST00000482647 ITGAVP06756 1048 aa20.89■□□□□ 0.93
SEC13-217ENST00000482647 ATXN1LP0C7T5 689 aaKnown RBP20.89■□□□□ 0.93
SEC13-217ENST00000482647 GOLGA6DP0CG33 693 aa20.89■□□□□ 0.93
SEC13-217ENST00000482647 HLA-DPA1P20036 260 aa20.89■□□□□ 0.93
SEC13-217ENST00000482647 CSRP1P21291 193 aaKnown RBP20.89■□□□□ 0.93
SEC13-217ENST00000482647 GDF10P55107 478 aa20.89■□□□□ 0.93
SEC13-217ENST00000482647 GNG11P61952 73 aa20.89■□□□□ 0.93
SEC13-217ENST00000482647 DPTQ07507 201 aa20.89■□□□□ 0.93
SEC13-217ENST00000482647 SLC1A5Q15758 541 aa20.89■□□□□ 0.93
SEC13-217ENST00000482647 P3H1Q32P28 736 aa20.89■□□□□ 0.93
SEC13-217ENST00000482647 SIRPB2Q5JXA9 342 aa20.89■□□□□ 0.93
SEC13-217ENST00000482647 DRICH1Q6PGQ1 229 aaPredicted RBP20.89■□□□□ 0.93
SEC13-217ENST00000482647 NLRP8Q86W28 1048 aa20.89■□□□□ 0.93
SEC13-217ENST00000482647 SLC25A41Q8N5S1 370 aa20.89■□□□□ 0.93
SEC13-217ENST00000482647 ATL2Q8NHH9 583 aa20.89■□□□□ 0.93
SEC13-217ENST00000482647 SAP25Q8TEE9 199 aa20.89■□□□□ 0.93
SEC13-217ENST00000482647 SETD7Q8WTS6 366 aaKnown RBP20.89■□□□□ 0.93
SEC13-217ENST00000482647 AP2M1Q96CW1 435 aa20.89■□□□□ 0.93
SEC13-217ENST00000482647 NAP1L3Q99457 506 aaPredicted RBP20.89■□□□□ 0.93
SEC13-217ENST00000482647 ZFYVE1Q9HBF4 777 aa20.89■□□□□ 0.93
SEC13-217ENST00000482647 DNAJC28Q9NX36 388 aa20.89■□□□□ 0.93
SEC13-217ENST00000482647 GOLGA6AQ9NYA3 693 aa20.89■□□□□ 0.93
SEC13-217ENST00000482647 DRG1Q9Y295 367 aaKnown RBP20.89■□□□□ 0.93
SEC13-217ENST00000482647 ADAMTS9Q9P2N4 1935 aa20.88■□□□□ 0.93
SEC13-217ENST00000482647 CACNB4O00305 520 aaPredicted RBP20.88■□□□□ 0.93
SEC13-217ENST00000482647 FLRT2O43155 660 aa20.88■□□□□ 0.93
SEC13-217ENST00000482647 SH3BP5O60239 455 aa20.88■□□□□ 0.93
SEC13-217ENST00000482647 HOXC4P09017 264 aaPredicted RBP20.88■□□□□ 0.93
SEC13-217ENST00000482647 C1SP09871 688 aa20.88■□□□□ 0.93
SEC13-217ENST00000482647 PIRTP0C851 137 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms