RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 FAM126AQ9BYI3 521 aaPredicted RBP13.25□□□□□ -0.29
HDAC1-208ENST00000482310 EIF2B3Q9NR50 452 aaKnown RBP13.25□□□□□ -0.29
HDAC1-208ENST00000482310 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.25□□□□□ -0.29
HDAC1-208ENST00000482310 ANAPC5Q9UJX4 755 aa13.25□□□□□ -0.29
HDAC1-208ENST00000482310 RPL26L1Q9UNX3 145 aaKnown RBP13.25□□□□□ -0.29
HDAC1-208ENST00000482310 CA5BQ9Y2D0 317 aa13.25□□□□□ -0.29
HDAC1-208ENST00000482310 V9GYY5 206 aaPredicted RBP13.25□□□□□ -0.29
HDAC1-208ENST00000482310 FRYLO94915 3013 aa13.25□□□□□ -0.29
HDAC1-208ENST00000482310 TM7SF2O76062 418 aa13.24□□□□□ -0.29
HDAC1-208ENST00000482310 SUN1O94901 812 aa13.24□□□□□ -0.29
HDAC1-208ENST00000482310 SEC31AO94979 1220 aaKnown RBP13.24□□□□□ -0.29
HDAC1-208ENST00000482310 EPOP01588 193 aa13.24□□□□□ -0.29
HDAC1-208ENST00000482310 IGHV4-34P06331 123 aa13.24□□□□□ -0.29
HDAC1-208ENST00000482310 IVDP26440 423 aa13.24□□□□□ -0.29
HDAC1-208ENST00000482310 MGAT1P26572 445 aa13.24□□□□□ -0.29
HDAC1-208ENST00000482310 ETV3P41162 512 aa13.24□□□□□ -0.29
HDAC1-208ENST00000482310 PTGER3P43115 390 aa13.24□□□□□ -0.29
HDAC1-208ENST00000482310 SUOXP51687 545 aa13.24□□□□□ -0.29
HDAC1-208ENST00000482310 RPS21P63220 83 aaKnown RBP13.24□□□□□ -0.29
HDAC1-208ENST00000482310 SARNPP82979 210 aaKnown RBP13.24□□□□□ -0.29
HDAC1-208ENST00000482310 CDH17Q12864 832 aa13.24□□□□□ -0.29
HDAC1-208ENST00000482310 CALCOCO2Q13137 446 aa13.24□□□□□ -0.29
HDAC1-208ENST00000482310 SGCGQ13326 291 aa13.24□□□□□ -0.29
HDAC1-208ENST00000482310 FGL2Q14314 439 aa13.24□□□□□ -0.29
HDAC1-208ENST00000482310 SMAD1Q15797 465 aaKnown RBP13.24□□□□□ -0.29
HDAC1-208ENST00000482310 HP1BP3Q5SSJ5 553 aaPredicted RBP13.24□□□□□ -0.29
HDAC1-208ENST00000482310 KIAA1161Q6NSJ0 714 aa13.24□□□□□ -0.29
HDAC1-208ENST00000482310 KDM7AQ6ZMT4 941 aa13.24□□□□□ -0.29
HDAC1-208ENST00000482310 ZNF534Q76KX8 674 aa13.24□□□□□ -0.29
HDAC1-208ENST00000482310 NAT8LQ8N9F0 302 aa13.24□□□□□ -0.29
HDAC1-208ENST00000482310 ZBTB44Q8NCP5 570 aa13.24□□□□□ -0.29
HDAC1-208ENST00000482310 NELL1Q92832 810 aa13.24□□□□□ -0.29
HDAC1-208ENST00000482310 ATOH1Q92858 354 aaPredicted RBP13.24□□□□□ -0.29
HDAC1-208ENST00000482310 BIRC7Q96CA5 298 aa13.24□□□□□ -0.29
HDAC1-208ENST00000482310 ZFYVE1Q9HBF4 777 aa13.24□□□□□ -0.29
HDAC1-208ENST00000482310 EPB41L5Q9HCM4 733 aa13.24□□□□□ -0.29
HDAC1-208ENST00000482310 CASS4Q9NQ75 786 aa13.24□□□□□ -0.29
HDAC1-208ENST00000482310 SYBUQ9NX95 663 aa13.24□□□□□ -0.29
HDAC1-208ENST00000482310 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.24□□□□□ -0.29
HDAC1-208ENST00000482310 DMGDHQ9UI17 866 aaKnown RBP13.24□□□□□ -0.29
HDAC1-208ENST00000482310 PPIL1Q9Y3C6 166 aa13.24□□□□□ -0.29
HDAC1-208ENST00000482310 KCTD3Q9Y597 815 aa13.24□□□□□ -0.29
HDAC1-208ENST00000482310 PCDHGA2Q9Y5H1 932 aa13.24□□□□□ -0.29
HDAC1-208ENST00000482310 LAMA1P25391 3075 aa13.24□□□□□ -0.29
HDAC1-208ENST00000482310 PROB1E7EW31 1015 aa13.23□□□□□ -0.29
HDAC1-208ENST00000482310 CCL22O00626 93 aa13.23□□□□□ -0.29
HDAC1-208ENST00000482310 RECQL5O94762 991 aaPredicted RBP13.23□□□□□ -0.29
HDAC1-208ENST00000482310 SLU7O95391 586 aaKnown RBP13.23□□□□□ -0.29
HDAC1-208ENST00000482310 PAK4O96013 591 aaPredicted RBP13.23□□□□□ -0.29
HDAC1-208ENST00000482310 PCCBP05166 539 aa13.23□□□□□ -0.29
HDAC1-208ENST00000482310 C7P10643 843 aa13.23□□□□□ -0.29
HDAC1-208ENST00000482310 NUBP1P53384 320 aa13.23□□□□□ -0.29
HDAC1-208ENST00000482310 ELF2Q15723 593 aa13.23□□□□□ -0.29
HDAC1-208ENST00000482310 ZNF284Q2VY69 593 aa13.23□□□□□ -0.29
HDAC1-208ENST00000482310 PLK5Q496M5 336 aa13.23□□□□□ -0.29
HDAC1-208ENST00000482310 PMS2CLQ68D20 193 aa13.23□□□□□ -0.29
HDAC1-208ENST00000482310 DUPD1Q68J44 220 aa13.23□□□□□ -0.29
HDAC1-208ENST00000482310 CASC4Q6P4E1 433 aa13.23□□□□□ -0.29
HDAC1-208ENST00000482310 LRRC8BQ6P9F7 803 aa13.23□□□□□ -0.29
HDAC1-208ENST00000482310 ZC3H14Q6PJT7 736 aaKnown RBP13.23□□□□□ -0.29
HDAC1-208ENST00000482310 LAYNQ6UX15 382 aa13.23□□□□□ -0.29
HDAC1-208ENST00000482310 Q6ZVL8 140 aa13.23□□□□□ -0.29
HDAC1-208ENST00000482310 PCGF5Q86SE9 256 aa13.23□□□□□ -0.29
HDAC1-208ENST00000482310 CAND1Q86VP6 1230 aaKnown RBP13.23□□□□□ -0.29
HDAC1-208ENST00000482310 TRIM69Q86WT6 500 aa13.23□□□□□ -0.29
HDAC1-208ENST00000482310 MPP5Q8N3R9 675 aa13.23□□□□□ -0.29
HDAC1-208ENST00000482310 IFT81Q8WYA0 676 aa13.23□□□□□ -0.29
HDAC1-208ENST00000482310 NUS1Q96E22 293 aa13.23□□□□□ -0.29
HDAC1-208ENST00000482310 SERPINB12Q96P63 405 aa13.23□□□□□ -0.29
HDAC1-208ENST00000482310 SLC17A9Q9BYT1 436 aa13.23□□□□□ -0.29
HDAC1-208ENST00000482310 DUSP15Q9H1R2 295 aaPredicted RBP13.23□□□□□ -0.29
HDAC1-208ENST00000482310 EPC1Q9H2F5 836 aa13.23□□□□□ -0.29
HDAC1-208ENST00000482310 KDM4CQ9H3R0 1056 aa13.23□□□□□ -0.29
HDAC1-208ENST00000482310 EBF2Q9HAK2 575 aa13.23□□□□□ -0.29
HDAC1-208ENST00000482310 MAGEE1Q9HCI5 957 aa13.23□□□□□ -0.29
HDAC1-208ENST00000482310 EIF2B4Q9UI10 523 aaKnown RBP13.23□□□□□ -0.29
HDAC1-208ENST00000482310 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.23□□□□□ -0.29
HDAC1-208ENST00000482310 SLCO1B1Q9Y6L6 691 aa13.23□□□□□ -0.29
HDAC1-208ENST00000482310 PTPRZ1P23471 2315 aaPredicted RBP13.23□□□□□ -0.29
HDAC1-208ENST00000482310 SPTBN4Q9H254 2564 aa13.23□□□□□ -0.29
HDAC1-208ENST00000482310 ZFC3H1O60293 1989 aaKnown RBP13.22□□□□□ -0.29
HDAC1-208ENST00000482310 LRP4O75096 1905 aa13.22□□□□□ -0.29
HDAC1-208ENST00000482310 METTL12A8MUP2 240 aa13.22□□□□□ -0.29
HDAC1-208ENST00000482310 RAD51BO15315 384 aa13.22□□□□□ -0.29
HDAC1-208ENST00000482310 ZNF30P17039 623 aa13.22□□□□□ -0.29
HDAC1-208ENST00000482310 GM2AP17900 193 aa13.22□□□□□ -0.29
HDAC1-208ENST00000482310 ITPKAP23677 461 aa13.22□□□□□ -0.29
HDAC1-208ENST00000482310 MAGEA6P43360 314 aa13.22□□□□□ -0.29
HDAC1-208ENST00000482310 STC1P52823 247 aa13.22□□□□□ -0.29
HDAC1-208ENST00000482310 PLTPP55058 493 aa13.22□□□□□ -0.29
HDAC1-208ENST00000482310 CLDN2P57739 230 aa13.22□□□□□ -0.29
HDAC1-208ENST00000482310 PTSQ03393 145 aa13.22□□□□□ -0.29
HDAC1-208ENST00000482310 MORF4L2Q15014 288 aa13.22□□□□□ -0.29
HDAC1-208ENST00000482310 IRF4Q15306 451 aa13.22□□□□□ -0.29
HDAC1-208ENST00000482310 CCDC6Q16204 474 aa13.22□□□□□ -0.29
HDAC1-208ENST00000482310 CDKN3Q16667 212 aa13.22□□□□□ -0.29
HDAC1-208ENST00000482310 BBS9Q3SYG4 887 aa13.22□□□□□ -0.29
HDAC1-208ENST00000482310 TMEM259Q4ZIN3 620 aa13.22□□□□□ -0.29
HDAC1-208ENST00000482310 SETMARQ53H47 684 aaPredicted RBP13.22□□□□□ -0.29
HDAC1-208ENST00000482310 FNBP1LQ5T0N5 605 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms