RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 FAM160B2Q86V87 743 aa3.39□□□□□ -1.87
SMC6-208ENST00000481708 NBPF5PQ86XG9 351 aaPredicted RBP3.39□□□□□ -1.87
SMC6-208ENST00000481708 FAM219AQ8IW50 185 aa3.39□□□□□ -1.87
SMC6-208ENST00000481708 TRIM48Q8IWZ4 208 aa3.39□□□□□ -1.87
SMC6-208ENST00000481708 MINDY1Q8N5J2 469 aa3.39□□□□□ -1.87
SMC6-208ENST00000481708 SYT2Q8N9I0 419 aaPredicted RBP3.39□□□□□ -1.87
SMC6-208ENST00000481708 TC2NQ8N9U0 490 aa3.39□□□□□ -1.87
SMC6-208ENST00000481708 MBD3L2Q8NHZ7 208 aaPredicted RBP3.39□□□□□ -1.87
SMC6-208ENST00000481708 CALML6Q8TD86 181 aa3.39□□□□□ -1.87
SMC6-208ENST00000481708 C2CD4CQ8TF44 421 aa3.39□□□□□ -1.87
SMC6-208ENST00000481708 ANKRD49Q8WVL7 239 aa3.39□□□□□ -1.87
SMC6-208ENST00000481708 FAM111AQ96PZ2 611 aa3.39□□□□□ -1.87
SMC6-208ENST00000481708 OR2A14Q96R47 310 aa3.39□□□□□ -1.87
SMC6-208ENST00000481708 FBRSL1Q9HCM7 1045 aaKnown RBP3.39□□□□□ -1.87
SMC6-208ENST00000481708 KCNK9Q9NPC2 374 aa3.39□□□□□ -1.87
SMC6-208ENST00000481708 SLC35C2Q9NQQ7 365 aa3.39□□□□□ -1.87
SMC6-208ENST00000481708 LRIT1Q9P2V4 623 aa3.39□□□□□ -1.87
SMC6-208ENST00000481708 CLIP2Q9UDT6 1046 aa3.39□□□□□ -1.87
SMC6-208ENST00000481708 SLC27A6Q9Y2P4 619 aa3.39□□□□□ -1.87
SMC6-208ENST00000481708 SQORQ9Y6N5 450 aa3.39□□□□□ -1.87
SMC6-208ENST00000481708 MUC3AQ02505 3323 aa3.39□□□□□ -1.87
SMC6-208ENST00000481708 A0A1B0GVM2 712 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 A0A1W2PQ27 194 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 A0A1W2PQ64 194 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 A0A1W2PQC6 194 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 A0A1W2PQD8 194 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 LRRD1A4D1F6 860 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 SAC3D1A6NKF1 404 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 KDM4EB2RXH2 506 aaPredicted RBP3.38□□□□□ -1.87
SMC6-208ENST00000481708 SIX3O95343 332 aaPredicted RBP3.38□□□□□ -1.87
SMC6-208ENST00000481708 PNPP00491 289 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 MTNR1AP48039 350 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 MXI1P50539 228 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 MRPL12P52815 198 aaKnown RBP3.38□□□□□ -1.87
SMC6-208ENST00000481708 NFATC3Q12968 1075 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 FRG1Q14331 258 aaKnown RBP3.38□□□□□ -1.87
SMC6-208ENST00000481708 ACOX1Q15067 660 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 RABEP1Q15276 862 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 ANKRD20A4Q4UJ75 823 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 ODF2Q5BJF6 829 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 ANKRD20A8PQ5CZ79 823 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 ANKRD20A2Q5SQ80 823 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 ANKRD20A1Q5TYW2 823 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 ANKRD20A3Q5VUR7 823 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 PLEKHM3Q6ZWE6 761 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 RNF144BQ7Z419 303 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 APOBEC3FQ8IUX4 373 aaKnown RBP3.38□□□□□ -1.87
SMC6-208ENST00000481708 CFAP61Q8NHU2 1237 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 WBP2Q969T9 261 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 FAM162AQ96A26 154 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 CCDC43Q96MW1 224 aaKnown RBP3.38□□□□□ -1.87
SMC6-208ENST00000481708 DPYSL5Q9BPU6 564 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 MLPHQ9BV36 600 aaPredicted RBP3.38□□□□□ -1.87
SMC6-208ENST00000481708 COA1Q9GZY4 146 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 TKTL2Q9H0I9 626 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 EPB41L4BQ9H329 900 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 PLEKHA4Q9H4M7 779 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 RLIMQ9NVW2 624 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 GPR160Q9UJ42 338 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 ZFP69BQ9UJL9 534 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 ENTPD2Q9Y5L3 495 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 SNX14Q9Y5W7 946 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 GREB1Q4ZG55 1949 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 PCDH15Q96QU1 1955 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 LRRC72A6NJI9 287 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 H0YIG0 161 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 CD3EAPO15446 510 aaKnown RBP3.38□□□□□ -1.87
SMC6-208ENST00000481708 PEX11AO75192 247 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 VNN2O95498 520 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 ADCY5O95622 1261 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 GNAI3P08754 354 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 XRCC6P12956 609 aaKnown RBP eCLIP3.38□□□□□ -1.87
SMC6-208ENST00000481708 MCM7P33993 719 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 GDNFP39905 211 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 IRAK1P51617 712 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 PTENP60484 403 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 GNAI1P63096 354 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 CDK18Q07002 472 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 SREBF2Q12772 1141 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 CEBPEQ15744 281 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 EPC2Q52LR7 807 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 USP39Q53GS9 565 aaKnown RBP3.38□□□□□ -1.87
SMC6-208ENST00000481708 TEX38Q6PEX7 206 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 CERS5Q8N5B7 392 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 C10orf53Q8N6V4 93 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 FSIP1Q8NA03 581 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 NETO2Q8NC67 525 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 SLC17A8Q8NDX2 589 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 RAB40AQ8WXH6 277 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 RMDN2Q96LZ7 410 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 ZSWIM3Q96MP5 696 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 NEU1Q99519 415 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 WDR83Q9BRX9 315 aaKnown RBP3.38□□□□□ -1.87
SMC6-208ENST00000481708 OSBPL8Q9BZF1 889 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 SLC5A7Q9GZV3 580 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 GSTO2Q9H4Y5 243 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 PDZD7Q9H5P4 517 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 SLC35D1Q9NTN3 355 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 C20orf141Q9NUB4 165 aa3.38□□□□□ -1.87
SMC6-208ENST00000481708 PEMTQ9UBM1 199 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms