RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 A0A1W2PQM1 296 aa15.26■□□□□ 0.03
LIMS3-203ENST00000480744 PRSS38A1L453 326 aa15.26■□□□□ 0.03
LIMS3-203ENST00000480744 CDRT15L2A8MXV6 281 aa15.26■□□□□ 0.03
LIMS3-203ENST00000480744 PDE2AO00408 941 aaPredicted RBP15.26■□□□□ 0.03
LIMS3-203ENST00000480744 TNFRSF10CO14798 259 aa15.26■□□□□ 0.03
LIMS3-203ENST00000480744 PLD2O14939 933 aa15.26■□□□□ 0.03
LIMS3-203ENST00000480744 HTRA2O43464 458 aaPredicted RBP15.26■□□□□ 0.03
LIMS3-203ENST00000480744 MAFKO60675 156 aa15.26■□□□□ 0.03
LIMS3-203ENST00000480744 HEXIM1O94992 359 aaKnown RBP15.26■□□□□ 0.03
LIMS3-203ENST00000480744 PEX11BO96011 259 aa15.26■□□□□ 0.03
LIMS3-203ENST00000480744 HOXC4P09017 264 aaPredicted RBP15.26■□□□□ 0.03
LIMS3-203ENST00000480744 CYP2A6P11509 494 aaPredicted RBP15.26■□□□□ 0.03
LIMS3-203ENST00000480744 MYCLP1P12525 358 aaPredicted RBP15.26■□□□□ 0.03
LIMS3-203ENST00000480744 CR2P20023 1033 aa15.26■□□□□ 0.03
LIMS3-203ENST00000480744 GJC1P36383 396 aa15.26■□□□□ 0.03
LIMS3-203ENST00000480744 TRIM23P36406 574 aa15.26■□□□□ 0.03
LIMS3-203ENST00000480744 ETV3P41162 512 aa15.26■□□□□ 0.03
LIMS3-203ENST00000480744 INHBCP55103 352 aa15.26■□□□□ 0.03
LIMS3-203ENST00000480744 CDH6P55285 790 aa15.26■□□□□ 0.03
LIMS3-203ENST00000480744 FANCCQ00597 558 aa15.26■□□□□ 0.03
LIMS3-203ENST00000480744 TRAF2Q12933 501 aa15.26■□□□□ 0.03
LIMS3-203ENST00000480744 ZSCAN23Q3MJ62 389 aa15.26■□□□□ 0.03
LIMS3-203ENST00000480744 MARC1Q5VT66 337 aa15.26■□□□□ 0.03
LIMS3-203ENST00000480744 RAB11FIP2Q7L804 512 aa15.26■□□□□ 0.03
LIMS3-203ENST00000480744 LUZP1Q86V48 1076 aa15.26■□□□□ 0.03
LIMS3-203ENST00000480744 HEATR4Q86WZ0 1026 aa15.26■□□□□ 0.03
LIMS3-203ENST00000480744 GPR156Q8NFN8 814 aa15.26■□□□□ 0.03
LIMS3-203ENST00000480744 TEKT4Q8WW24 435 aa15.26■□□□□ 0.03
LIMS3-203ENST00000480744 LIN37Q96GY3 246 aaPredicted RBP15.26■□□□□ 0.03
LIMS3-203ENST00000480744 MGME1Q9BQP7 344 aa15.26■□□□□ 0.03
LIMS3-203ENST00000480744 CARS2Q9HA77 564 aaKnown RBP15.26■□□□□ 0.03
LIMS3-203ENST00000480744 CBX8Q9HC52 389 aa15.26■□□□□ 0.03
LIMS3-203ENST00000480744 PHPT1Q9NRX4 125 aaPredicted RBP15.26■□□□□ 0.03
LIMS3-203ENST00000480744 ATXN7L1Q9ULK2 861 aaPredicted RBP15.26■□□□□ 0.03
LIMS3-203ENST00000480744 PHTF1Q9UMS5 762 aa15.26■□□□□ 0.03
LIMS3-203ENST00000480744 BZW2Q9Y6E2 419 aaKnown RBP15.26■□□□□ 0.03
LIMS3-203ENST00000480744 A0A1W2PQJ5 194 aa15.25■□□□□ 0.03
LIMS3-203ENST00000480744 TMX2-CTNND1H3BSU7 103 aa15.25■□□□□ 0.03
LIMS3-203ENST00000480744 NOBOXO60393 691 aa15.25■□□□□ 0.03
LIMS3-203ENST00000480744 C1QL1O75973 258 aa15.25■□□□□ 0.03
LIMS3-203ENST00000480744 SERPING1P05155 500 aa15.25■□□□□ 0.03
LIMS3-203ENST00000480744 ITGA2BP08514 1039 aa15.25■□□□□ 0.03
LIMS3-203ENST00000480744 HGFP14210 728 aa15.25■□□□□ 0.03
LIMS3-203ENST00000480744 GLB1P16278 677 aa15.25■□□□□ 0.03
LIMS3-203ENST00000480744 CTPS1P17812 591 aa15.25■□□□□ 0.03
LIMS3-203ENST00000480744 MLLT3P42568 568 aaPredicted RBP15.25■□□□□ 0.03
LIMS3-203ENST00000480744 SLC25A11Q02978 314 aaKnown RBP15.25■□□□□ 0.03
LIMS3-203ENST00000480744 ITKQ08881 620 aa15.25■□□□□ 0.03
LIMS3-203ENST00000480744 VAC14Q08AM6 782 aa15.25■□□□□ 0.03
LIMS3-203ENST00000480744 MMRN1Q13201 1228 aa15.25■□□□□ 0.03
LIMS3-203ENST00000480744 ARHGEF7Q14155 803 aa15.25■□□□□ 0.03
LIMS3-203ENST00000480744 PTPRRQ15256 657 aa15.25■□□□□ 0.03
LIMS3-203ENST00000480744 TSR1Q2NL82 804 aaKnown RBP15.25■□□□□ 0.03
LIMS3-203ENST00000480744 C14orf28Q4W4Y0 310 aa15.25■□□□□ 0.03
LIMS3-203ENST00000480744 CERCAMQ5T4B2 595 aa15.25■□□□□ 0.03
LIMS3-203ENST00000480744 ARMC12Q5T9G4 340 aa15.25■□□□□ 0.03
LIMS3-203ENST00000480744 SPECC1LQ69YQ0 1117 aa15.25■□□□□ 0.03
LIMS3-203ENST00000480744 RAET1GQ6H3X3 334 aa15.25■□□□□ 0.03
LIMS3-203ENST00000480744 HSD11B1LQ7Z5J1 315 aa15.25■□□□□ 0.03
LIMS3-203ENST00000480744 CLEC14AQ86T13 490 aa15.25■□□□□ 0.03
LIMS3-203ENST00000480744 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.25■□□□□ 0.03
LIMS3-203ENST00000480744 NIPA2Q8N8Q9 360 aa15.25■□□□□ 0.03
LIMS3-203ENST00000480744 LSM14AQ8ND56 463 aaKnown RBP15.25■□□□□ 0.03
LIMS3-203ENST00000480744 TMEM74Q96NL1 305 aa15.25■□□□□ 0.03
LIMS3-203ENST00000480744 NT5MQ9NPB1 228 aa15.25■□□□□ 0.03
LIMS3-203ENST00000480744 LRIT1Q9P2V4 623 aa15.25■□□□□ 0.03
LIMS3-203ENST00000480744 RNF215Q9Y6U7 377 aa15.25■□□□□ 0.03
LIMS3-203ENST00000480744 A0A087X0T9 212 aa15.24■□□□□ 0.03
LIMS3-203ENST00000480744 NPIPB15A6NHN6 443 aaPredicted RBP15.24■□□□□ 0.03
LIMS3-203ENST00000480744 ERVH48-1M5A8F1 160 aa15.24■□□□□ 0.03
LIMS3-203ENST00000480744 PGLSO95336 258 aa15.24■□□□□ 0.03
LIMS3-203ENST00000480744 JMJD7P0C870 316 aa15.24■□□□□ 0.03
LIMS3-203ENST00000480744 FAM228BP0C875 321 aa15.24■□□□□ 0.03
LIMS3-203ENST00000480744 LHCGRP22888 699 aa15.24■□□□□ 0.03
LIMS3-203ENST00000480744 UGT1A5P35504 534 aa15.24■□□□□ 0.03
LIMS3-203ENST00000480744 GNPDA1P46926 289 aa15.24■□□□□ 0.03
LIMS3-203ENST00000480744 UBASH3AP57075 661 aa15.24■□□□□ 0.03
LIMS3-203ENST00000480744 SKOR1P84550 965 aa15.24■□□□□ 0.03
LIMS3-203ENST00000480744 RHDQ02161 417 aa15.24■□□□□ 0.03
LIMS3-203ENST00000480744 EIF3IQ13347 325 aaKnown RBP15.24■□□□□ 0.03
LIMS3-203ENST00000480744 OGFOD3Q6PK18 319 aa15.24■□□□□ 0.03
LIMS3-203ENST00000480744 DOK6Q6PKX4 331 aa15.24■□□□□ 0.03
LIMS3-203ENST00000480744 Q6ZVL8 140 aa15.24■□□□□ 0.03
LIMS3-203ENST00000480744 USP45Q70EL2 814 aa15.24■□□□□ 0.03
LIMS3-203ENST00000480744 SPRED1Q7Z699 444 aa15.24■□□□□ 0.03
LIMS3-203ENST00000480744 TSPAN33Q86UF1 283 aa15.24■□□□□ 0.03
LIMS3-203ENST00000480744 KIAA1524Q8TCG1 905 aa15.24■□□□□ 0.03
LIMS3-203ENST00000480744 SPOCK2Q92563 424 aa15.24■□□□□ 0.03
LIMS3-203ENST00000480744 SYN2Q92777 582 aaPredicted RBP15.24■□□□□ 0.03
LIMS3-203ENST00000480744 DTD2Q96FN9 168 aa15.24■□□□□ 0.03
LIMS3-203ENST00000480744 SEMA3CQ99985 751 aa15.24■□□□□ 0.03
LIMS3-203ENST00000480744 KCTD5Q9NXV2 234 aa15.24■□□□□ 0.03
LIMS3-203ENST00000480744 PISDQ9UG56 409 aa15.24■□□□□ 0.03
LIMS3-203ENST00000480744 A0A0U1RQS6 177 aa15.23■□□□□ 0.03
LIMS3-203ENST00000480744 MYO1FO00160 1098 aa15.23■□□□□ 0.03
LIMS3-203ENST00000480744 MFSD11O43934 449 aa15.23■□□□□ 0.03
LIMS3-203ENST00000480744 CYP1A2P05177 515 aa15.23■□□□□ 0.03
LIMS3-203ENST00000480744 CEACAM5P06731 702 aa15.23■□□□□ 0.03
LIMS3-203ENST00000480744 CD48P09326 243 aa15.23■□□□□ 0.03
LIMS3-203ENST00000480744 SLC5A2P31639 672 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms