RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 SPECC1LQ69YQ0 1117 aa18.86■□□□□ 0.61
ABCF3-214ENST00000480562 TRIM11Q96F44 468 aa18.86■□□□□ 0.61
ABCF3-214ENST00000480562 CSPG4P5Q96PW8 444 aa18.86■□□□□ 0.61
ABCF3-214ENST00000480562 NUDCD1Q96RS6 583 aa18.86■□□□□ 0.61
ABCF3-214ENST00000480562 DPEP2Q9H4A9 486 aa18.86■□□□□ 0.61
ABCF3-214ENST00000480562 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.86■□□□□ 0.61
ABCF3-214ENST00000480562 UNC13CQ8NB66 2214 aa18.86■□□□□ 0.61
ABCF3-214ENST00000480562 PRSS38A1L453 326 aa18.85■□□□□ 0.61
ABCF3-214ENST00000480562 K7ENP7 123 aa18.85■□□□□ 0.61
ABCF3-214ENST00000480562 MAFKO60675 156 aa18.85■□□□□ 0.61
ABCF3-214ENST00000480562 SOCS5O75159 536 aa18.85■□□□□ 0.61
ABCF3-214ENST00000480562 HEXIM1O94992 359 aaKnown RBP18.85■□□□□ 0.61
ABCF3-214ENST00000480562 CCKBRP32239 447 aa18.85■□□□□ 0.61
ABCF3-214ENST00000480562 VIPR1P32241 457 aa18.85■□□□□ 0.61
ABCF3-214ENST00000480562 HSPA9P38646 679 aaKnown RBP18.85■□□□□ 0.61
ABCF3-214ENST00000480562 ZNF165P49910 485 aa18.85■□□□□ 0.61
ABCF3-214ENST00000480562 TRAF2Q12933 501 aa18.85■□□□□ 0.61
ABCF3-214ENST00000480562 EIF3IQ13347 325 aaKnown RBP18.85■□□□□ 0.61
ABCF3-214ENST00000480562 HLTFQ14527 1009 aaKnown RBP eCLIP18.85■□□□□ 0.61
ABCF3-214ENST00000480562 BOLA3Q53S33 107 aa18.85■□□□□ 0.61
ABCF3-214ENST00000480562 INO80CQ6PI98 192 aaPredicted RBP18.85■□□□□ 0.61
ABCF3-214ENST00000480562 HSD11B1LQ7Z5J1 315 aa18.85■□□□□ 0.61
ABCF3-214ENST00000480562 SPRED1Q7Z699 444 aa18.85■□□□□ 0.61
ABCF3-214ENST00000480562 ZNF605Q86T29 641 aa18.85■□□□□ 0.61
ABCF3-214ENST00000480562 SNRNP27Q8WVK2 155 aaKnown RBP18.85■□□□□ 0.61
ABCF3-214ENST00000480562 SPOCK2Q92563 424 aa18.85■□□□□ 0.61
ABCF3-214ENST00000480562 TTC9Q92623 222 aa18.85■□□□□ 0.61
ABCF3-214ENST00000480562 BTBD6Q96KE9 485 aa18.85■□□□□ 0.61
ABCF3-214ENST00000480562 TMEM74Q96NL1 305 aa18.85■□□□□ 0.61
ABCF3-214ENST00000480562 SEMA4CQ9C0C4 833 aa18.85■□□□□ 0.61
ABCF3-214ENST00000480562 CARS2Q9HA77 564 aaKnown RBP18.85■□□□□ 0.61
ABCF3-214ENST00000480562 LRIT1Q9P2V4 623 aa18.85■□□□□ 0.61
ABCF3-214ENST00000480562 PISDQ9UG56 409 aa18.85■□□□□ 0.61
ABCF3-214ENST00000480562 APPL1Q9UKG1 709 aa18.85■□□□□ 0.61
ABCF3-214ENST00000480562 FUCA1P04066 466 aa18.84■□□□□ 0.61
ABCF3-214ENST00000480562 MYCLP1P12525 358 aaPredicted RBP18.84■□□□□ 0.61
ABCF3-214ENST00000480562 PLA2G2AP14555 144 aa18.84■□□□□ 0.61
ABCF3-214ENST00000480562 LHCGRP22888 699 aa18.84■□□□□ 0.61
ABCF3-214ENST00000480562 ETV3P41162 512 aa18.84■□□□□ 0.61
ABCF3-214ENST00000480562 ARHGEF7Q14155 803 aa18.84■□□□□ 0.61
ABCF3-214ENST00000480562 LY6DQ14210 128 aa18.84■□□□□ 0.61
ABCF3-214ENST00000480562 NR1I3Q14994 352 aa18.84■□□□□ 0.61
ABCF3-214ENST00000480562 CCDC81Q6ZN84 652 aa18.84■□□□□ 0.61
ABCF3-214ENST00000480562 HEATR4Q86WZ0 1026 aa18.84■□□□□ 0.61
ABCF3-214ENST00000480562 ATPAF2Q8N5M1 289 aa18.84■□□□□ 0.61
ABCF3-214ENST00000480562 PTCD2Q8WV60 388 aaKnown RBP18.84■□□□□ 0.61
ABCF3-214ENST00000480562 MGME1Q9BQP7 344 aa18.84■□□□□ 0.61
ABCF3-214ENST00000480562 PCDH18Q9HCL0 1135 aa18.84■□□□□ 0.61
ABCF3-214ENST00000480562 PHPT1Q9NRX4 125 aaPredicted RBP18.84■□□□□ 0.61
ABCF3-214ENST00000480562 SPATS2LQ9NUQ6 558 aaKnown RBP18.84■□□□□ 0.61
ABCF3-214ENST00000480562 PHTF1Q9UMS5 762 aa18.84■□□□□ 0.61
ABCF3-214ENST00000480562 LOXL2Q9Y4K0 774 aa18.84■□□□□ 0.61
ABCF3-214ENST00000480562 PCDHGA7Q9Y5G6 932 aa18.84■□□□□ 0.61
ABCF3-214ENST00000480562 A0A0U1RQS6 177 aa18.83■□□□□ 0.6
ABCF3-214ENST00000480562 A0A1W2PQ67 120 aa18.83■□□□□ 0.6
ABCF3-214ENST00000480562 GOLGA6CA6NDK9 693 aa18.83■□□□□ 0.6
ABCF3-214ENST00000480562 GOLGA6BA6NDN3 693 aa18.83■□□□□ 0.6
ABCF3-214ENST00000480562 NPIPB15A6NHN6 443 aaPredicted RBP18.83■□□□□ 0.6
ABCF3-214ENST00000480562 PDE2AO00408 941 aaPredicted RBP18.83■□□□□ 0.6
ABCF3-214ENST00000480562 SERPINC1P01008 464 aa18.83■□□□□ 0.6
ABCF3-214ENST00000480562 CEACAM5P06731 702 aa18.83■□□□□ 0.6
ABCF3-214ENST00000480562 JMJD7P0C870 316 aa18.83■□□□□ 0.6
ABCF3-214ENST00000480562 GOLGA6DP0CG33 693 aa18.83■□□□□ 0.6
ABCF3-214ENST00000480562 CTPS1P17812 591 aa18.83■□□□□ 0.6
ABCF3-214ENST00000480562 ITIH1P19827 911 aa18.83■□□□□ 0.6
ABCF3-214ENST00000480562 MMP13P45452 471 aa18.83■□□□□ 0.6
ABCF3-214ENST00000480562 POLD2P49005 469 aa18.83■□□□□ 0.6
ABCF3-214ENST00000480562 MAZP56270 477 aaKnown RBP18.83■□□□□ 0.6
ABCF3-214ENST00000480562 TGIF1Q15583 401 aa18.83■□□□□ 0.6
ABCF3-214ENST00000480562 TDRD12Q587J7 1177 aaKnown RBP18.83■□□□□ 0.6
ABCF3-214ENST00000480562 HGSNATQ68CP4 663 aa18.83■□□□□ 0.6
ABCF3-214ENST00000480562 CAVIN1Q6NZI2 390 aaKnown RBP18.83■□□□□ 0.6
ABCF3-214ENST00000480562 Q6ZVL8 140 aa18.83■□□□□ 0.6
ABCF3-214ENST00000480562 TMPRSS9Q7Z410 1059 aa18.83■□□□□ 0.6
ABCF3-214ENST00000480562 TSPAN33Q86UF1 283 aa18.83■□□□□ 0.6
ABCF3-214ENST00000480562 NRROSQ86YC3 692 aa18.83■□□□□ 0.6
ABCF3-214ENST00000480562 CBARPQ8N350 705 aaPredicted RBP18.83■□□□□ 0.6
ABCF3-214ENST00000480562 DTD2Q96FN9 168 aa18.83■□□□□ 0.6
ABCF3-214ENST00000480562 WBP1Q96G27 269 aa18.83■□□□□ 0.6
ABCF3-214ENST00000480562 TEX101Q9BY14 249 aa18.83■□□□□ 0.6
ABCF3-214ENST00000480562 THAP2Q9H0W7 228 aa18.83■□□□□ 0.6
ABCF3-214ENST00000480562 GOLGA6AQ9NYA3 693 aa18.83■□□□□ 0.6
ABCF3-214ENST00000480562 ARHGEF17Q96PE2 2063 aaPredicted RBP18.82■□□□□ 0.6
ABCF3-214ENST00000480562 EFSO43281 561 aa18.82■□□□□ 0.6
ABCF3-214ENST00000480562 PGLSO95336 258 aa18.82■□□□□ 0.6
ABCF3-214ENST00000480562 CYP2A6P11509 494 aaPredicted RBP18.82■□□□□ 0.6
ABCF3-214ENST00000480562 PNLIPP16233 465 aa18.82■□□□□ 0.6
ABCF3-214ENST00000480562 GNPDA1P46926 289 aa18.82■□□□□ 0.6
ABCF3-214ENST00000480562 CDK3Q00526 305 aa18.82■□□□□ 0.6
ABCF3-214ENST00000480562 B4GALNT1Q00973 533 aa18.82■□□□□ 0.6
ABCF3-214ENST00000480562 SLC25A11Q02978 314 aaKnown RBP18.82■□□□□ 0.6
ABCF3-214ENST00000480562 ZFP36L1Q07352 338 aaKnown RBP18.82■□□□□ 0.6
ABCF3-214ENST00000480562 MMRN1Q13201 1228 aa18.82■□□□□ 0.6
ABCF3-214ENST00000480562 SRSF6Q13247 344 aaKnown RBP18.82■□□□□ 0.6
ABCF3-214ENST00000480562 PIGHQ14442 188 aaPredicted RBP18.82■□□□□ 0.6
ABCF3-214ENST00000480562 IQCB1Q15051 598 aa18.82■□□□□ 0.6
ABCF3-214ENST00000480562 TSR1Q2NL82 804 aaKnown RBP18.82■□□□□ 0.6
ABCF3-214ENST00000480562 MARC1Q5VT66 337 aa18.82■□□□□ 0.6
ABCF3-214ENST00000480562 RFLNAQ6ZTI6 216 aa18.82■□□□□ 0.6
ABCF3-214ENST00000480562 BBS5Q8N3I7 341 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms