RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 NR4A3Q92570 626 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 RFKQ969G6 155 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 KLHL32Q96NJ5 620 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 HTATIP2Q9BUP3 242 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 SPATC1LQ9H0A9 340 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 TTYH1Q9H313 450 aaPredicted RBP6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 TRIM39Q9HCM9 518 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 TRPC4Q9UBN4 977 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 PLIN4Q96Q06 1357 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 LOC100506127A0A0U1RQW1 187 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 RFXANKO14593 260 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 NDST3O95803 873 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 IFNGP01579 166 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 ADRB2P07550 413 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 RPL19P84098 196 aaKnown RBP6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 ADIGQ0VDE8 80 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 PLEKHG4Q58EX7 1191 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 ARL13AQ5H913 290 aaPredicted RBP6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 TATDN1Q6P1N9 297 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 GET4Q7L5D6 327 aaPredicted RBP6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 RNF180Q86T96 592 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 ZNF655Q8N720 491 aaPredicted RBP6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 SPPL2BQ8TCT7 592 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 GJD4Q96KN9 370 aaPredicted RBP6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 MLPHQ9BV36 600 aaPredicted RBP6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 ZYG11BQ9C0D3 744 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 SLC25A51Q9H1U9 297 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 CDT1Q9H211 546 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 MYOZ2Q9NPC6 264 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 NUDT4Q9NZJ9 180 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 ZNF624Q9P2J8 865 aaPredicted RBP6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 A0A0J9YYE9 177 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 FAM86C2PA6NEL3 165 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 OR6C75A6NL08 312 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 PBX3P40426 434 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 ALDH7A1P49419 539 aaKnown RBP6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 PTSQ03393 145 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 ITPK1Q13572 414 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 DAG1Q14118 895 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 PERM1Q5SV97 790 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 RNF220Q5VTB9 566 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 DENND6AQ8IWF6 608 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 LPCAT1Q8NF37 534 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 FBXO30Q8TB52 745 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 POP1Q99575 1024 aaKnown RBP6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 C1QTNF7Q9BXJ2 289 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 LRRC3Q9BY71 257 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 ALG9Q9H6U8 611 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 EXD2Q9NVH0 621 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 TAS2R14Q9NYV8 317 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 GULP1Q9UBP9 304 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 SUCOQ9UBS9 1254 aaKnown RBP6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 KLQ9UEF7 1012 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 PFDN2Q9UHV9 154 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 SLC25A13Q9UJS0 675 aa6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 NOCTQ9UK39 431 aaKnown RBP6.16□□□□□ -1.42
PRPF4B-205ENST00000480058 URADA6NGE7 173 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 STK16O75716 305 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 PSMB4P28070 264 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 NOS3P29474 1203 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 OR1E1P30953 314 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 HNF4AP41235 474 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 ALDH9A1P49189 494 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 FBXW4P57775 412 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 MRPS5P82675 430 aaKnown RBP6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 FGD3Q5JSP0 725 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 AMIGO2Q86SJ2 522 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 TMEM110Q86TL2 294 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 YAF2Q8IY57 180 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 BHMTQ93088 406 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 CRELD1Q96HD1 420 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 SEPT5Q99719 369 aaPredicted RBP6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 C14orf105Q9NVL8 296 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 ABI2Q9NYB9 513 aaPredicted RBP6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 MARCH2Q9P0N8 246 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 PTGFRNQ9P2B2 879 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 COL1A2P08123 1366 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 ZBTB11O95625 1053 aaPredicted RBP6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 PIGRP01833 764 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 ZSCAN5DPP0CG00 497 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 ERVK-10P10266 1014 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 GALK1P51570 392 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 EFEMP1Q12805 493 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 RFTN1Q14699 578 aaPredicted RBP6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 INTS5Q6P9B9 1019 aaKnown RBP6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 ZDHHC24Q6UX98 284 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 USP45Q70EL2 814 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 PLEKHH3Q7Z736 793 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 LAPTM4BQ86VI4 370 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 SMYD1Q8NB12 490 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 MYO19Q96H55 970 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 FBXL18Q96ME1 805 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 KREMEN1Q96MU8 473 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 ZNF347Q96SE7 839 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 HSD3B7Q9H2F3 369 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 ZSCAN32Q9NX65 697 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 PCDHGB6Q9Y5F9 930 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 MAGED1Q9Y5V3 778 aaPredicted RBP6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 BCL9LQ86UU0 1499 aa6.15□□□□□ -1.42
PRPF4B-205ENST00000480058 ARHGEF33A8MVX0 844 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms