RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 VIPR1P32241 457 aa14.36□□□□□ -0.11
ATG4B-218ENST00000479554 GJC1P36383 396 aa14.36□□□□□ -0.11
ATG4B-218ENST00000479554 ERVPABLB-1P60509 514 aa14.36□□□□□ -0.11
ATG4B-218ENST00000479554 MAXP61244 160 aa14.36□□□□□ -0.11
ATG4B-218ENST00000479554 TLE3Q04726 772 aa14.36□□□□□ -0.11
ATG4B-218ENST00000479554 SPIDRQ14159 915 aa14.36□□□□□ -0.11
ATG4B-218ENST00000479554 CNGA3Q16281 694 aa14.36□□□□□ -0.11
ATG4B-218ENST00000479554 RALGPS1Q5JS13 557 aa14.36□□□□□ -0.11
ATG4B-218ENST00000479554 KCTD16Q68DU8 428 aa14.36□□□□□ -0.11
ATG4B-218ENST00000479554 SPACA3Q8IXA5 215 aa14.36□□□□□ -0.11
ATG4B-218ENST00000479554 CCDC74AQ96AQ1 378 aa14.36□□□□□ -0.11
ATG4B-218ENST00000479554 NAF1Q96HR8 494 aaKnown RBP14.36□□□□□ -0.11
ATG4B-218ENST00000479554 FCRL3Q96P31 734 aaPredicted RBP14.36□□□□□ -0.11
ATG4B-218ENST00000479554 PRORYQ9H606 182 aa14.36□□□□□ -0.11
ATG4B-218ENST00000479554 MRPL40Q9NQ50 206 aaKnown RBP14.36□□□□□ -0.11
ATG4B-218ENST00000479554 THSD1Q9NS62 852 aa14.36□□□□□ -0.11
ATG4B-218ENST00000479554 ZNHIT6Q9NWK9 470 aaKnown RBP14.36□□□□□ -0.11
ATG4B-218ENST00000479554 KCTD5Q9NXV2 234 aa14.36□□□□□ -0.11
ATG4B-218ENST00000479554 EIF4E1BA6NMX2 242 aaKnown RBP14.35□□□□□ -0.11
ATG4B-218ENST00000479554 TNFRSF10CO14798 259 aa14.35□□□□□ -0.11
ATG4B-218ENST00000479554 MFSD11O43934 449 aa14.35□□□□□ -0.11
ATG4B-218ENST00000479554 HEXIM1O94992 359 aaKnown RBP14.35□□□□□ -0.11
ATG4B-218ENST00000479554 HOXC4P09017 264 aaPredicted RBP14.35□□□□□ -0.11
ATG4B-218ENST00000479554 CD48P09326 243 aa14.35□□□□□ -0.11
ATG4B-218ENST00000479554 CYP2A6P11509 494 aaPredicted RBP14.35□□□□□ -0.11
ATG4B-218ENST00000479554 RBMS1P29558 406 aaKnown RBP14.35□□□□□ -0.11
ATG4B-218ENST00000479554 TRIM23P36406 574 aa14.35□□□□□ -0.11
ATG4B-218ENST00000479554 TRAF2Q12933 501 aa14.35□□□□□ -0.11
ATG4B-218ENST00000479554 MMRN1Q13201 1228 aa14.35□□□□□ -0.11
ATG4B-218ENST00000479554 DENND2CQ68D51 928 aa14.35□□□□□ -0.11
ATG4B-218ENST00000479554 PNCKQ6P2M8 343 aa14.35□□□□□ -0.11
ATG4B-218ENST00000479554 TAF8Q7Z7C8 310 aa14.35□□□□□ -0.11
ATG4B-218ENST00000479554 LRRC49Q8IUZ0 686 aa14.35□□□□□ -0.11
ATG4B-218ENST00000479554 OR6C4Q8NGE1 309 aa14.35□□□□□ -0.11
ATG4B-218ENST00000479554 HIC2Q96JB3 615 aa14.35□□□□□ -0.11
ATG4B-218ENST00000479554 COQ10AQ96MF6 247 aa14.35□□□□□ -0.11
ATG4B-218ENST00000479554 BBC3Q96PG8 261 aaPredicted RBP14.35□□□□□ -0.11
ATG4B-218ENST00000479554 UBL7Q96S82 380 aaPredicted RBP14.35□□□□□ -0.11
ATG4B-218ENST00000479554 NT5MQ9NPB1 228 aa14.35□□□□□ -0.11
ATG4B-218ENST00000479554 ASCL3Q9NQ33 180 aa14.35□□□□□ -0.11
ATG4B-218ENST00000479554 CTTNBP2NLQ9P2B4 639 aa14.35□□□□□ -0.11
ATG4B-218ENST00000479554 MOSPD1Q9UJG1 213 aa14.35□□□□□ -0.11
ATG4B-218ENST00000479554 PHTF1Q9UMS5 762 aa14.35□□□□□ -0.11
ATG4B-218ENST00000479554 RAI2Q9Y5P3 530 aa14.35□□□□□ -0.11
ATG4B-218ENST00000479554 ASXL3Q9C0F0 2248 aa14.35□□□□□ -0.11
ATG4B-218ENST00000479554 KALRNO60229 2985 aa14.35□□□□□ -0.11
ATG4B-218ENST00000479554 PDE2AO00408 941 aaPredicted RBP14.34□□□□□ -0.11
ATG4B-218ENST00000479554 NTN3O00634 580 aaPredicted RBP14.34□□□□□ -0.11
ATG4B-218ENST00000479554 CASC3O15234 703 aaKnown RBP14.34□□□□□ -0.11
ATG4B-218ENST00000479554 ZSCAN12O43309 604 aa14.34□□□□□ -0.11
ATG4B-218ENST00000479554 PGLSO95336 258 aa14.34□□□□□ -0.11
ATG4B-218ENST00000479554 MYCLP1P12525 358 aaPredicted RBP14.34□□□□□ -0.11
ATG4B-218ENST00000479554 IL4RP24394 825 aa14.34□□□□□ -0.11
ATG4B-218ENST00000479554 ARHGEF7Q14155 803 aa14.34□□□□□ -0.11
ATG4B-218ENST00000479554 DPYSL3Q14195 570 aa14.34□□□□□ -0.11
ATG4B-218ENST00000479554 ARMC12Q5T9G4 340 aa14.34□□□□□ -0.11
ATG4B-218ENST00000479554 BROXQ5VW32 411 aa14.34□□□□□ -0.11
ATG4B-218ENST00000479554 NCBP2-AS2Q69YL0 99 aa14.34□□□□□ -0.11
ATG4B-218ENST00000479554 FOXR1Q6PIV2 292 aa14.34□□□□□ -0.11
ATG4B-218ENST00000479554 IGF2-ASQ6U949 168 aa14.34□□□□□ -0.11
ATG4B-218ENST00000479554 USP45Q70EL2 814 aa14.34□□□□□ -0.11
ATG4B-218ENST00000479554 PELI3Q8N2H9 469 aa14.34□□□□□ -0.11
ATG4B-218ENST00000479554 FAM46DQ8NEK8 389 aa14.34□□□□□ -0.11
ATG4B-218ENST00000479554 FAM71BQ8TC56 605 aa14.34□□□□□ -0.11
ATG4B-218ENST00000479554 KCNE4Q8WWG9 221 aa14.34□□□□□ -0.11
ATG4B-218ENST00000479554 DTD2Q96FN9 168 aa14.34□□□□□ -0.11
ATG4B-218ENST00000479554 GFM1Q96RP9 751 aaKnown RBP14.34□□□□□ -0.11
ATG4B-218ENST00000479554 LGR4Q9BXB1 951 aa14.34□□□□□ -0.11
ATG4B-218ENST00000479554 POLR1EQ9GZS1 481 aaKnown RBP14.34□□□□□ -0.11
ATG4B-218ENST00000479554 TMEM168Q9H0V1 697 aa14.34□□□□□ -0.11
ATG4B-218ENST00000479554 CYP4F12Q9HCS2 524 aa14.34□□□□□ -0.11
ATG4B-218ENST00000479554 PHPT1Q9NRX4 125 aaPredicted RBP14.34□□□□□ -0.11
ATG4B-218ENST00000479554 RABGEF1Q9UJ41 708 aa14.34□□□□□ -0.11
ATG4B-218ENST00000479554 PCDHGA8Q9Y5G5 932 aa14.34□□□□□ -0.11
ATG4B-218ENST00000479554 SHROOM3Q8TF72 1996 aa14.34□□□□□ -0.11
ATG4B-218ENST00000479554 CCDC187A0A096LP49 1063 aa14.33□□□□□ -0.12
ATG4B-218ENST00000479554 A0A1W2PNU3 283 aaPredicted RBP14.33□□□□□ -0.12
ATG4B-218ENST00000479554 PRSS38A1L453 326 aa14.33□□□□□ -0.12
ATG4B-218ENST00000479554 GOLGA6CA6NDK9 693 aa14.33□□□□□ -0.12
ATG4B-218ENST00000479554 GOLGA6BA6NDN3 693 aa14.33□□□□□ -0.12
ATG4B-218ENST00000479554 GOLGA6L9A6NEM1 432 aa14.33□□□□□ -0.12
ATG4B-218ENST00000479554 NPIPB15A6NHN6 443 aaPredicted RBP14.33□□□□□ -0.12
ATG4B-218ENST00000479554 B4DGG1 531 aa14.33□□□□□ -0.12
ATG4B-218ENST00000479554 PSMD11O00231 422 aa14.33□□□□□ -0.12
ATG4B-218ENST00000479554 PROSCO94903 275 aa14.33□□□□□ -0.12
ATG4B-218ENST00000479554 GOLGA6DP0CG33 693 aa14.33□□□□□ -0.12
ATG4B-218ENST00000479554 KRT10P13645 584 aa14.33□□□□□ -0.12
ATG4B-218ENST00000479554 LHCGRP22888 699 aa14.33□□□□□ -0.12
ATG4B-218ENST00000479554 HNRNPH3P31942 346 aaKnown RBP14.33□□□□□ -0.12
ATG4B-218ENST00000479554 ETV3P41162 512 aa14.33□□□□□ -0.12
ATG4B-218ENST00000479554 GARSP41250 739 aaKnown RBP14.33□□□□□ -0.12
ATG4B-218ENST00000479554 ARSEP51690 589 aa14.33□□□□□ -0.12
ATG4B-218ENST00000479554 PDX1P52945 283 aa14.33□□□□□ -0.12
ATG4B-218ENST00000479554 CXADRP78310 365 aa14.33□□□□□ -0.12
ATG4B-218ENST00000479554 CCL7P80098 99 aa14.33□□□□□ -0.12
ATG4B-218ENST00000479554 ITKQ08881 620 aa14.33□□□□□ -0.12
ATG4B-218ENST00000479554 GALNT2Q10471 571 aa14.33□□□□□ -0.12
ATG4B-218ENST00000479554 PAFAH1B3Q15102 231 aaKnown RBP14.33□□□□□ -0.12
ATG4B-218ENST00000479554 TIGD7Q6NT04 549 aaPredicted RBP14.33□□□□□ -0.12
ATG4B-218ENST00000479554 HSD11B1LQ7Z5J1 315 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms