RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 ARL8BQ9NVJ2 186 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 AURKAIP1Q9NWT8 199 aaPredicted RBP7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 TFCP2L1Q9NZI6 479 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 LRIT1Q9P2V4 623 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 CRNNQ9UBG3 495 aaPredicted RBP7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 AMACRQ9UHK6 382 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 PZPP20742 1482 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 NKTRP30414 1462 aaKnown RBP7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 UTYO14607 1347 aa7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 PRDM15P57071 1507 aaPredicted RBP7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 MAP3K1Q13233 1512 aa7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 LOC100509620A0A075B734 347 aa7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 GPR75-ASB3A0A0A6YYF3 556 aa7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 TRAV34A0A0B4J273 112 aa7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 OTOL1A6NHN0 477 aaPredicted RBP7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 LRRC72A6NJI9 287 aa7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 HSPB2A8KAH6 182 aa7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 C19orf81C9J6K1 198 aa7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 TPOP07202 933 aa7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 ZNF182P17025 639 aaPredicted RBP7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 CALRP27797 417 aaKnown RBP7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 MCM7P33993 719 aa7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 GRIA3P42263 894 aa7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 CSE1LP55060 971 aaKnown RBP7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 BPIFB3P59826 476 aa7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 DLG2Q15700 870 aa7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 HSPB2Q16082 182 aa7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 SYTL3Q4VX76 610 aa7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 SOWAHCQ53LP3 525 aaPredicted RBP7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 ABHD17BQ5VST6 288 aa7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 CST9LP1Q5W188 147 aa7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 ZNF449Q6P9G9 518 aa7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 IYDQ6PHW0 289 aa7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 C11orf88Q6PI97 169 aa7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 LCTLQ6UWM7 567 aa7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 VSTM1Q6UX27 236 aa7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 Q6ZNX1 250 aa7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 HAPLN4Q86UW8 402 aa7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 LURAP1LQ8IV03 231 aa7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 TC2NQ8N9U0 490 aa7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 RASSF8Q8NHQ8 419 aa7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 ATOH1Q92858 354 aaPredicted RBP7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 TMEM68Q96MH6 324 aa7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 CFAP57Q96MR6 1250 aa7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 PSD3Q9NYI0 1048 aa7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 GDE1Q9NZC3 331 aa7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 R3HDM2Q9Y2K5 976 aaKnown RBP7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 POMT1Q9Y6A1 747 aa7.54□□□□□ -1.2
GAPVD1-217ENST00000479511 CYP2D7A0A087X1C5 515 aa7.53□□□□□ -1.2
GAPVD1-217ENST00000479511 A0A0U1RQK1 487 aa7.53□□□□□ -1.2
GAPVD1-217ENST00000479511 ZNF320A2RRD8 509 aa7.53□□□□□ -1.2
GAPVD1-217ENST00000479511 DDTLA6NHG4 134 aaPredicted RBP7.53□□□□□ -1.2
GAPVD1-217ENST00000479511 KLRF2D3W0D1 207 aa7.53□□□□□ -1.2
GAPVD1-217ENST00000479511 MSI1O43347 362 aaKnown RBP7.53□□□□□ -1.2
GAPVD1-217ENST00000479511 RECQL5O94762 991 aaPredicted RBP7.53□□□□□ -1.2
GAPVD1-217ENST00000479511 FYNP06241 537 aa7.53□□□□□ -1.2
GAPVD1-217ENST00000479511 KLRC2P26717 231 aa7.53□□□□□ -1.2
GAPVD1-217ENST00000479511 AP1B1Q10567 949 aa7.53□□□□□ -1.2
GAPVD1-217ENST00000479511 HYAL4Q2M3T9 481 aa7.53□□□□□ -1.2
GAPVD1-217ENST00000479511 ZNF585AQ6P3V2 769 aa7.53□□□□□ -1.2
GAPVD1-217ENST00000479511 FBXO46Q6PJ61 603 aaPredicted RBP7.53□□□□□ -1.2
GAPVD1-217ENST00000479511 PET117Q6UWS5 81 aa7.53□□□□□ -1.2
GAPVD1-217ENST00000479511 SLC44A3Q8N4M1 653 aa7.53□□□□□ -1.2
GAPVD1-217ENST00000479511 DPP10Q8N608 796 aa7.53□□□□□ -1.2
GAPVD1-217ENST00000479511 TMCO5AQ8N6Q1 288 aa7.53□□□□□ -1.2
GAPVD1-217ENST00000479511 PI4KAP1Q8N8J0 262 aa7.53□□□□□ -1.2
GAPVD1-217ENST00000479511 FAM162AQ96A26 154 aa7.53□□□□□ -1.2
GAPVD1-217ENST00000479511 SIN3AQ96ST3 1273 aa7.53□□□□□ -1.2
GAPVD1-217ENST00000479511 WDR6Q9NNW5 1121 aaKnown RBP7.53□□□□□ -1.2
GAPVD1-217ENST00000479511 PARPBPQ9NWS1 579 aa7.53□□□□□ -1.2
GAPVD1-217ENST00000479511 EXO1Q9UQ84 846 aaKnown RBP7.53□□□□□ -1.2
GAPVD1-217ENST00000479511 BTBD3Q9Y2F9 522 aa7.53□□□□□ -1.2
GAPVD1-217ENST00000479511 A2MP01023 1474 aa7.53□□□□□ -1.2
GAPVD1-217ENST00000479511 ARHGAP23Q9P227 1491 aa7.53□□□□□ -1.2
GAPVD1-217ENST00000479511 INO80Q9ULG1 1556 aaPredicted RBP7.53□□□□□ -1.2
GAPVD1-217ENST00000479511 FNDC1Q4ZHG4 1894 aaPredicted RBP7.53□□□□□ -1.2
GAPVD1-217ENST00000479511 SPHKAPQ2M3C7 1700 aa7.52□□□□□ -1.2
GAPVD1-217ENST00000479511 ADGBQ8N7X0 1667 aa7.52□□□□□ -1.21
GAPVD1-217ENST00000479511 LNP1A1A4G5 178 aa7.52□□□□□ -1.21
GAPVD1-217ENST00000479511 EBAG9O00559 213 aa7.52□□□□□ -1.21
GAPVD1-217ENST00000479511 HTATSF1O43719 755 aaKnown RBP7.52□□□□□ -1.21
GAPVD1-217ENST00000479511 MT-ND3P03897 115 aa7.52□□□□□ -1.21
GAPVD1-217ENST00000479511 ST6GAL1P15907 406 aa7.52□□□□□ -1.21
GAPVD1-217ENST00000479511 AGAP20933 346 aa7.52□□□□□ -1.21
GAPVD1-217ENST00000479511 DRD4P21917 467 aa7.52□□□□□ -1.21
GAPVD1-217ENST00000479511 ACADLP28330 430 aa7.52□□□□□ -1.21
GAPVD1-217ENST00000479511 PTGER1P34995 402 aa7.52□□□□□ -1.21
GAPVD1-217ENST00000479511 CENPAP49450 140 aa7.52□□□□□ -1.21
GAPVD1-217ENST00000479511 CLCN5P51795 746 aa7.52□□□□□ -1.21
GAPVD1-217ENST00000479511 TMF1P82094 1093 aa7.52□□□□□ -1.21
GAPVD1-217ENST00000479511 ECT2LQ008S8 904 aa7.52□□□□□ -1.21
GAPVD1-217ENST00000479511 UBXN1Q04323 297 aa7.52□□□□□ -1.21
GAPVD1-217ENST00000479511 WASHC5Q12768 1159 aa7.52□□□□□ -1.21
GAPVD1-217ENST00000479511 PKP1Q13835 747 aa7.52□□□□□ -1.21
GAPVD1-217ENST00000479511 KCNC3Q14003 757 aa7.52□□□□□ -1.21
GAPVD1-217ENST00000479511 R3HDM1Q15032 1099 aaKnown RBP7.52□□□□□ -1.21
GAPVD1-217ENST00000479511 SHBQ15464 509 aa7.52□□□□□ -1.21
GAPVD1-217ENST00000479511 ZNF124Q15973 351 aa7.52□□□□□ -1.21
GAPVD1-217ENST00000479511 PFKFB3Q16875 520 aaPredicted RBP7.52□□□□□ -1.21
GAPVD1-217ENST00000479511 KIAA1755Q5JYT7 1200 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms