RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 GCLMP48507 274 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 CDK7P50613 346 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 SMARCB1Q12824 385 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 TRAF2Q12933 501 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 SNAPC2Q13487 334 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 PYDC2Q56P42 97 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 AGBL2Q5U5Z8 902 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 PID1Q7Z2X4 250 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 TSEN15Q8WW01 171 aaKnown RBP5.44□□□□□ -1.54
USF3-202ENST00000478658 GCDHQ92947 438 aaPredicted RBP5.44□□□□□ -1.54
USF3-202ENST00000478658 WDR55Q9H6Y2 383 aaPredicted RBP5.44□□□□□ -1.54
USF3-202ENST00000478658 ZNF286AQ9HBT8 521 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 LIN7CQ9NUP9 197 aaKnown RBP5.44□□□□□ -1.54
USF3-202ENST00000478658 PLEK2Q9NYT0 353 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 KLQ9UEF7 1012 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 A8MVM7 634 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 ERVV-2B6SEH9 535 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 PEX12O00623 359 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 MSCO60682 206 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 AREGP15514 252 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 AKT2P31751 481 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 RPA3P35244 121 aaPredicted RBP5.44□□□□□ -1.54
USF3-202ENST00000478658 SERPINF1P36955 418 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 AVPR1BP47901 424 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 CACNB1Q02641 598 aaPredicted RBP5.44□□□□□ -1.54
USF3-202ENST00000478658 PPATQ06203 517 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 ACAP1Q15027 740 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 ADGRF1Q5T601 910 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 LINC00471Q8N535 108 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 NHLRC2Q8NBF2 726 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 M1APQ8TC57 530 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 MAPKAP1Q9BPZ7 522 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 STRADBQ9C0K7 418 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 SIK2Q9H0K1 926 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 C17orf75Q9HAS0 396 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 LGR6Q9HBX8 967 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 BCS1LQ9Y276 419 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 CDK13Q14004 1512 aaKnown RBP5.44□□□□□ -1.54
USF3-202ENST00000478658 USP17L3A6NCW0 530 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 USP17L4A6NCW7 530 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 BTBD17A6NE02 478 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 CLIC2O15247 247 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 ATG13O75143 517 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 HK1P19367 917 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 DDX6P26196 483 aaKnown RBP eCLIP5.44□□□□□ -1.54
USF3-202ENST00000478658 IL12BP29460 328 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 COASYQ13057 564 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 ADGRE1Q14246 886 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 ZYXQ15942 572 aaKnown RBP5.44□□□□□ -1.54
USF3-202ENST00000478658 KCNA10Q16322 511 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 ACSM3Q53FZ2 586 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 MFSD7Q6UXD7 560 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 LANCL3Q6ZV70 420 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 USP17L1Q7RTZ2 530 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 BRIX1Q8TDN6 353 aaKnown RBP5.44□□□□□ -1.54
USF3-202ENST00000478658 TBCKQ8TEA7 893 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 STK32AQ8WU08 396 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 ZDHHC15Q96MV8 337 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 GALNT9Q9HCQ5 603 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 CDC14AQ9UNH5 594 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 PLAGL2Q9UPG8 496 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 PCDHA13Q9Y5I0 950 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 SHROOM2Q13796 1616 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 PLB1Q6P1J6 1458 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 CYP27B1O15528 508 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 FKTNO75072 461 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 DGAT1O75907 488 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 KITP10721 976 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 FDPSP14324 419 aaKnown RBP5.43□□□□□ -1.54
USF3-202ENST00000478658 AGXTP21549 392 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 SLC7A5Q01650 507 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 FOXD4Q12950 439 aaPredicted RBP5.43□□□□□ -1.54
USF3-202ENST00000478658 PROSER3Q2NL68 480 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 KDELC2Q7Z4H8 507 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 ZNF589Q86UQ0 364 aaPredicted RBP5.43□□□□□ -1.54
USF3-202ENST00000478658 OR7A2PQ8NGA2 310 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 OR4C6Q8NH72 309 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 TIFAQ96CG3 184 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 CXorf40BQ96DE9 158 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 KIF12Q96FN5 646 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 PLIN2Q99541 437 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 EIF2AK1Q9BQI3 630 aaKnown RBP5.43□□□□□ -1.54
USF3-202ENST00000478658 CXorf56Q9H5V9 222 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 SCPEP1Q9HB40 452 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 CYTH4Q9UIA0 394 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 NPC1L1Q9UHC9 1359 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 PLEKHG1Q9ULL1 1385 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 TTC26A0AVF1 554 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 A6NLC8 198 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 GABBR2O75899 941 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 ZNF20P17024 532 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 CCR1P32246 355 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 TAS2R41P59536 307 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 AIMP2Q13155 320 aaKnown RBP5.43□□□□□ -1.54
USF3-202ENST00000478658 GCKRQ14397 625 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 TLR1Q15399 786 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 PIK3R6Q5UE93 754 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 BAIAP2L2Q6UXY1 529 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 TTLQ8NG68 377 aa5.43□□□□□ -1.54
USF3-202ENST00000478658 ZNF564Q8TBZ8 553 aaPredicted RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms