RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 CEPT1Q9Y6K0 416 aa3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 TRIP12Q14669 1992 aaPredicted RBP3.99□□□□□ -1.77
SMARCA1-204ENST00000478420 FAM237AA0A1B0GTK4 181 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 hDV102S1A0JD36 115 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 AKR1B15C9JRZ8 316 aaPredicted RBP3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 F5H0A9 414 aaPredicted RBP3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 GAGE7O76087 117 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 GAGE12FP0CL80 117 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 GAGE12GP0CL81 117 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 GAGE12IP0CL82 117 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 ZNF182P17025 639 aaPredicted RBP3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 DDX5P17844 614 aaKnown RBP3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 MCCP23508 829 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 NFKBIAP25963 317 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 TKTP29401 623 aaKnown RBP3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 PBX3P40426 434 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 PEX5P50542 639 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 METAP2P50579 478 aaKnown RBP eCLIP3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 DSCR9P59020 149 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 SEC61A1P61619 476 aaKnown RBP3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 BNC1Q01954 994 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 CSTF3Q12996 717 aaKnown RBP3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 GAGE1Q13065 139 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 GAGE4Q13068 117 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 HNRNPA0Q13151 305 aaKnown RBP3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 EFNB3Q15768 340 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 XKR9Q5GH70 373 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 HYIQ5T013 277 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 CCDC30Q5VVM6 783 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 PLEKHA7Q6IQ23 1121 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 ANKRD54Q6NXT1 300 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 METTL2BQ6P1Q9 378 aaKnown RBP3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 CRELD2Q6UXH1 353 aaPredicted RBP3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 DLK2Q6UY11 383 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 HAPLN4Q86UW8 402 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 ADSSL1Q8N142 457 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 FRMD1Q8N878 549 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 TMEM116Q8NCL8 245 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 MMABQ96EY8 250 aaPredicted RBP3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 METTL2AQ96IZ6 378 aaKnown RBP3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 TMEM68Q96MH6 324 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 MEIS3Q99687 375 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 KXD1Q9BQD3 176 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 TMEM47Q9BQJ4 181 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 IFIH1Q9BYX4 1025 aaKnown RBP3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 NDST4Q9H3R1 872 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 SCPEP1Q9HB40 452 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 FBRSL1Q9HCM7 1045 aaKnown RBP3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 HINT3Q9NQE9 182 aaKnown RBP3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 CNGB3Q9NQW8 809 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 KRT84Q9NSB2 600 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 OCIAD1Q9NX40 245 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 CLIC5Q9NZA1 410 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 EHD2Q9NZN4 543 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 PIAS3Q9Y6X2 628 aa3.98□□□□□ -1.77
SMARCA1-204ENST00000478420 ITIH6Q6UXX5 1313 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 CPED1A4D0V7 1026 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 PGPEP1LA6NFU8 196 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 SLC28A2O43868 658 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 BAIAP3O94812 1187 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 PAPSS2O95340 614 aaPredicted RBP3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 IPO7O95373 1038 aaKnown RBP3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 DDX58O95786 925 aaKnown RBP3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 CYC1P08574 325 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 IGHV4-30-4P0DP06 118 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 G6PDP11413 515 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 ZNF12P17014 697 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 MAOAP21397 527 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 TNFRSF8P28908 595 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 ARL3P36405 182 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 EIF2S3P41091 472 aaKnown RBP3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 COMPP49747 757 aaPredicted RBP3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 ECT2LQ008S8 904 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 DDR1Q08345 913 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 DHX34Q14147 1143 aaKnown RBP3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 KRT24Q2M2I5 525 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 AMZ1Q400G9 498 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 SLC45A4Q5BKX6 768 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 CXorf66Q5JRM2 361 aaPredicted RBP3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 FAM69BQ5VUD6 431 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 GGNBP1Q5YKI7 109 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 HIST2H2BCQ6DN03 193 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 HIST2H2BDQ6DRA6 164 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 CREB3L2Q70SY1 520 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 TAOK1Q7L7X3 1001 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 PXKQ7Z7A4 578 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 CCDC13Q8IYE1 715 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 SPATA6LQ8N4H0 392 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 CREB3L4Q8TEY5 395 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 NUDCD2Q8WVJ2 157 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 ERP27Q96DN0 273 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 PERPQ96FX8 193 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 HARBI1Q96MB7 349 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 OR1F2PQ96R84 312 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 FIZ1Q96SL8 496 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 SH3GL2Q99962 352 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 HAUS8Q9BT25 410 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 C17orf75Q9HAS0 396 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 ABI3Q9P2A4 366 aa3.97□□□□□ -1.77
SMARCA1-204ENST00000478420 SLC9A2Q9UBY0 812 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms