RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, humanhuman

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-208ENST00000478188 CLPBQ9H078 707 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 SP110Q9HB58 689 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 ETNK1Q9HBU6 452 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 TRIM10Q9UDY6 481 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 KLK13Q9UKR3 277 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 HPCAL4Q9UM19 191 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 NEUROG3Q9Y4Z2 214 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 PCYT1BQ9Y5K3 369 aaPredicted RBP4.25□□□□□ -1.73
POLR2B-208ENST00000478188 ALG6Q9Y672 507 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 PTPRZ1P23471 2315 aaPredicted RBP4.25□□□□□ -1.73
POLR2B-208ENST00000478188 FAM47DPA6NHR8 397 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 K7ESM1 405 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 TOR1BO14657 336 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 AKR1B10O60218 316 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 BNIP3LO60238 219 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 PALMO75781 387 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 HEXIM1O94992 359 aaKnown RBP4.25□□□□□ -1.73
POLR2B-208ENST00000478188 MAP3K6O95382 1288 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 IL2RAP01589 272 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 IGHA1P01876 353 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 CELA2BP08218 269 aaPredicted RBP4.25□□□□□ -1.73
POLR2B-208ENST00000478188 THEGLP0DJG4 465 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 ACP1P24666 158 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 SERPINB6P35237 376 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 MMP13P45452 471 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 RNF144AP50876 292 aaPredicted RBP4.25□□□□□ -1.73
POLR2B-208ENST00000478188 ATP1A2P50993 1020 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 VAV2P52735 878 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 PDX1P52945 283 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 MAXP61244 160 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 CCZ1BP86790 482 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 CCZ1P86791 482 aaPredicted RBP4.25□□□□□ -1.73
POLR2B-208ENST00000478188 SEMG2Q02383 582 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 DSC2Q02487 901 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 KLF1Q13351 362 aaPredicted RBP4.25□□□□□ -1.73
POLR2B-208ENST00000478188 SUZ12Q15022 739 aaKnown RBP4.25□□□□□ -1.73
POLR2B-208ENST00000478188 SMAD1Q15797 465 aaKnown RBP4.25□□□□□ -1.73
POLR2B-208ENST00000478188 IFI16Q16666 785 aaKnown RBP4.25□□□□□ -1.73
POLR2B-208ENST00000478188 ESRP1Q6NXG1 681 aaKnown RBP4.25□□□□□ -1.73
POLR2B-208ENST00000478188 FBXL19Q6PCT2 694 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 KDELC1Q6UW63 502 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 MACC1Q6ZN28 852 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 ZNF662Q6ZS27 426 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 RFLNAQ6ZTI6 216 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 HSD11B1LQ7Z5J1 315 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 TSPAN33Q86UF1 283 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 NT5DC3Q86UY8 548 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 C17orf82Q86X59 251 aaPredicted RBP4.25□□□□□ -1.73
POLR2B-208ENST00000478188 CACTIN-AS1Q8N1I8 211 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 OXR1Q8N573 874 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 ATPAF2Q8N5M1 289 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 FAM181AQ8N9Y4 354 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 OR4C6Q8NH72 309 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 IMP4Q96G21 291 aaKnown RBP4.25□□□□□ -1.73
POLR2B-208ENST00000478188 QKIQ96PU8 341 aaKnown RBP eCLIP4.25□□□□□ -1.73
POLR2B-208ENST00000478188 LGMNQ99538 433 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 LRRC61Q9BV99 259 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 CINPQ9BW66 212 aaPredicted RBP4.25□□□□□ -1.73
POLR2B-208ENST00000478188 BOCQ9BWV1 1114 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 ATP13A3Q9H7F0 1226 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 DONSONQ9NYP3 566 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 IMPACTQ9P2X3 320 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 NFKBIL1Q9UBC1 381 aaPredicted RBP4.25□□□□□ -1.73
POLR2B-208ENST00000478188 B4GALT6Q9UBX8 382 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 CNOT6Q9ULM6 557 aaKnown RBP4.25□□□□□ -1.73
POLR2B-208ENST00000478188 PCDHA3Q9Y5H8 950 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 EPN1Q9Y6I3 576 aaPredicted RBP4.25□□□□□ -1.73
POLR2B-208ENST00000478188 DMXL2Q8TDJ6 3036 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 GON4LQ3T8J9 2241 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 A0A0U1RQS6 177 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.25□□□□□ -1.73
POLR2B-208ENST00000478188 A0A1W2PNU3 283 aaPredicted RBP4.25□□□□□ -1.73
POLR2B-208ENST00000478188 CAPN8A6NHC0 703 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 PSMD11O00231 422 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 CASC3O15234 703 aaKnown RBP4.25□□□□□ -1.73
POLR2B-208ENST00000478188 SLC31A1O15431 190 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 KRT1P04264 644 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 DGKAP23743 735 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 AKT2P31751 481 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 VIPR1P32241 457 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 GPC1P35052 558 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 GRK6P43250 576 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 MAGEA1P43355 309 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 RABIFP47224 123 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 GSK3AP49840 483 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 LIG3P49916 1009 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 RENBPP51606 427 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 STC1P52823 247 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 GDF10P55107 478 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 KRT81Q14533 505 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 TRIP6Q15654 476 aaKnown RBP4.25□□□□□ -1.73
POLR2B-208ENST00000478188 HADHQ16836 314 aaKnown RBP4.25□□□□□ -1.73
POLR2B-208ENST00000478188 ALG11Q2TAA5 492 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 UAP1L1Q3KQV9 507 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 PRAMEF14Q5SWL7 426 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 AADACL2Q6P093 401 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 CCNI2Q6ZMN8 369 aaPredicted RBP4.25□□□□□ -1.73
POLR2B-208ENST00000478188 Q6ZSR6 202 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 BBS12Q6ZW61 710 aa4.25□□□□□ -1.73
POLR2B-208ENST00000478188 TMPRSS7Q7RTY8 843 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms