RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 TMCO4Q5TGY1 634 aa16.73■□□□□ 0.27
TRIM13-208ENST00000478111 SPECC1LQ69YQ0 1117 aa16.73■□□□□ 0.27
TRIM13-208ENST00000478111 LZTR1Q8N653 840 aa16.73■□□□□ 0.27
TRIM13-208ENST00000478111 GPBAR1Q8TDU6 330 aa16.73■□□□□ 0.27
TRIM13-208ENST00000478111 MED8Q96G25 268 aa16.73■□□□□ 0.27
TRIM13-208ENST00000478111 TEX101Q9BY14 249 aa16.73■□□□□ 0.27
TRIM13-208ENST00000478111 WDR26Q9H7D7 661 aa16.73■□□□□ 0.27
TRIM13-208ENST00000478111 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.73■□□□□ 0.27
TRIM13-208ENST00000478111 AIPL1Q9NZN9 384 aa16.73■□□□□ 0.27
TRIM13-208ENST00000478111 CNOT8Q9UFF9 292 aaKnown RBP16.73■□□□□ 0.27
TRIM13-208ENST00000478111 PISDQ9UG56 409 aa16.73■□□□□ 0.27
TRIM13-208ENST00000478111 LOXL2Q9Y4K0 774 aa16.73■□□□□ 0.27
TRIM13-208ENST00000478111 ST14Q9Y5Y6 855 aa16.73■□□□□ 0.27
TRIM13-208ENST00000478111 UBR5O95071 2799 aaPredicted RBP16.73■□□□□ 0.27
TRIM13-208ENST00000478111 MAST4O15021 2626 aa16.73■□□□□ 0.27
TRIM13-208ENST00000478111 HECTD1Q9ULT8 2610 aa16.72■□□□□ 0.27
TRIM13-208ENST00000478111 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.72■□□□□ 0.27
TRIM13-208ENST00000478111 PRSS38A1L453 326 aa16.72■□□□□ 0.27
TRIM13-208ENST00000478111 B4DGG1 531 aa16.72■□□□□ 0.27
TRIM13-208ENST00000478111 NUDT21O43809 227 aaKnown RBP16.72■□□□□ 0.27
TRIM13-208ENST00000478111 CEACAM5P06731 702 aa16.72■□□□□ 0.27
TRIM13-208ENST00000478111 MYCLP1P12525 358 aaPredicted RBP16.72■□□□□ 0.27
TRIM13-208ENST00000478111 KRT10P13645 584 aa16.72■□□□□ 0.27
TRIM13-208ENST00000478111 AMPD1P23109 780 aa16.72■□□□□ 0.27
TRIM13-208ENST00000478111 DPYSL2Q16555 572 aa16.72■□□□□ 0.27
TRIM13-208ENST00000478111 JAMLQ86YT9 394 aa16.72■□□□□ 0.27
TRIM13-208ENST00000478111 PTCD2Q8WV60 388 aaKnown RBP16.72■□□□□ 0.27
TRIM13-208ENST00000478111 DPEP2Q9H4A9 486 aa16.72■□□□□ 0.27
TRIM13-208ENST00000478111 NOD2Q9HC29 1040 aa16.72■□□□□ 0.27
TRIM13-208ENST00000478111 FLNCQ14315 2725 aa16.71■□□□□ 0.27
TRIM13-208ENST00000478111 MAFKO60675 156 aa16.71■□□□□ 0.27
TRIM13-208ENST00000478111 SOCS5O75159 536 aa16.71■□□□□ 0.27
TRIM13-208ENST00000478111 HEXIM1O94992 359 aaKnown RBP16.71■□□□□ 0.27
TRIM13-208ENST00000478111 FGF1P05230 155 aa16.71■□□□□ 0.27
TRIM13-208ENST00000478111 JMJD7P0C870 316 aa16.71■□□□□ 0.27
TRIM13-208ENST00000478111 CCNB1P14635 433 aa16.71■□□□□ 0.27
TRIM13-208ENST00000478111 LHCGRP22888 699 aa16.71■□□□□ 0.27
TRIM13-208ENST00000478111 VIPR1P32241 457 aa16.71■□□□□ 0.27
TRIM13-208ENST00000478111 PCK1P35558 622 aa16.71■□□□□ 0.27
TRIM13-208ENST00000478111 TRAF2Q12933 501 aa16.71■□□□□ 0.27
TRIM13-208ENST00000478111 ARHGEF7Q14155 803 aa16.71■□□□□ 0.27
TRIM13-208ENST00000478111 PTPRRQ15256 657 aa16.71■□□□□ 0.27
TRIM13-208ENST00000478111 ASIC2Q16515 512 aa16.71■□□□□ 0.27
TRIM13-208ENST00000478111 LINC00303Q3SY05 128 aa16.71■□□□□ 0.27
TRIM13-208ENST00000478111 ZNF438Q7Z4V0 828 aa16.71■□□□□ 0.27
TRIM13-208ENST00000478111 HSD11B1LQ7Z5J1 315 aa16.71■□□□□ 0.27
TRIM13-208ENST00000478111 POLNQ7Z5Q5 900 aa16.71■□□□□ 0.27
TRIM13-208ENST00000478111 EXD3Q8N9H8 876 aa16.71■□□□□ 0.27
TRIM13-208ENST00000478111 NUS1Q96E22 293 aa16.71■□□□□ 0.27
TRIM13-208ENST00000478111 NUDCD1Q96RS6 583 aa16.71■□□□□ 0.27
TRIM13-208ENST00000478111 FRMD8Q9BZ67 464 aaPredicted RBP16.71■□□□□ 0.27
TRIM13-208ENST00000478111 SEMA6CQ9H3T2 930 aa16.71■□□□□ 0.27
TRIM13-208ENST00000478111 CARS2Q9HA77 564 aaKnown RBP16.71■□□□□ 0.27
TRIM13-208ENST00000478111 MOSPD1Q9UJG1 213 aa16.71■□□□□ 0.27
TRIM13-208ENST00000478111 PRAMEF33A0A0G2JMD5 474 aa16.7■□□□□ 0.26
TRIM13-208ENST00000478111 C9orf172C9J069 976 aa16.7■□□□□ 0.26
TRIM13-208ENST00000478111 AGRPO00253 132 aa16.7■□□□□ 0.26
TRIM13-208ENST00000478111 PDE2AO00408 941 aaPredicted RBP16.7■□□□□ 0.26
TRIM13-208ENST00000478111 PRAMEF10O60809 474 aa16.7■□□□□ 0.26
TRIM13-208ENST00000478111 LIPCP11150 499 aa16.7■□□□□ 0.26
TRIM13-208ENST00000478111 ETV3P41162 512 aa16.7■□□□□ 0.26
TRIM13-208ENST00000478111 MAZP56270 477 aaKnown RBP16.7■□□□□ 0.26
TRIM13-208ENST00000478111 TYRO3Q06418 890 aa16.7■□□□□ 0.26
TRIM13-208ENST00000478111 ZNF235Q14590 738 aa16.7■□□□□ 0.26
TRIM13-208ENST00000478111 NR1D2Q14995 579 aa16.7■□□□□ 0.26
TRIM13-208ENST00000478111 C16orf72Q14CZ0 275 aa16.7■□□□□ 0.26
TRIM13-208ENST00000478111 TSR1Q2NL82 804 aaKnown RBP16.7■□□□□ 0.26
TRIM13-208ENST00000478111 SMTNL2Q2TAL5 461 aa16.7■□□□□ 0.26
TRIM13-208ENST00000478111 TXNRD3NBQ6F5E7 133 aa16.7■□□□□ 0.26
TRIM13-208ENST00000478111 ZNF574Q6ZN55 896 aaPredicted RBP16.7■□□□□ 0.26
TRIM13-208ENST00000478111 HEATR4Q86WZ0 1026 aa16.7■□□□□ 0.26
TRIM13-208ENST00000478111 PAF1Q8N7H5 531 aa16.7■□□□□ 0.26
TRIM13-208ENST00000478111 TMEM159Q96B96 161 aa16.7■□□□□ 0.26
TRIM13-208ENST00000478111 ZNF653Q96CK0 615 aa16.7■□□□□ 0.26
TRIM13-208ENST00000478111 DTD2Q96FN9 168 aa16.7■□□□□ 0.26
TRIM13-208ENST00000478111 MGME1Q9BQP7 344 aa16.7■□□□□ 0.26
TRIM13-208ENST00000478111 ISCUQ9H1K1 167 aa16.7■□□□□ 0.26
TRIM13-208ENST00000478111 ZWILCHQ9H900 591 aa16.7■□□□□ 0.26
TRIM13-208ENST00000478111 FOXJ2Q9P0K8 574 aa16.7■□□□□ 0.26
TRIM13-208ENST00000478111 PHTF1Q9UMS5 762 aa16.7■□□□□ 0.26
TRIM13-208ENST00000478111 SCINQ9Y6U3 715 aa16.7■□□□□ 0.26
TRIM13-208ENST00000478111 COL12A1Q99715 3063 aa16.69■□□□□ 0.26
TRIM13-208ENST00000478111 A0A1W2PQ67 120 aa16.69■□□□□ 0.26
TRIM13-208ENST00000478111 NPIPB15A6NHN6 443 aaPredicted RBP16.69■□□□□ 0.26
TRIM13-208ENST00000478111 H3BRJ5 948 aa16.69■□□□□ 0.26
TRIM13-208ENST00000478111 CPP00450 1065 aa16.69■□□□□ 0.26
TRIM13-208ENST00000478111 RARAP10276 462 aa16.69■□□□□ 0.26
TRIM13-208ENST00000478111 SKILP12757 684 aa16.69■□□□□ 0.26
TRIM13-208ENST00000478111 AK4P27144 223 aaPredicted RBP16.69■□□□□ 0.26
TRIM13-208ENST00000478111 HSPA9P38646 679 aaKnown RBP16.69■□□□□ 0.26
TRIM13-208ENST00000478111 OR1D5P58170 312 aa16.69■□□□□ 0.26
TRIM13-208ENST00000478111 MAXP61244 160 aa16.69■□□□□ 0.26
TRIM13-208ENST00000478111 CDK3Q00526 305 aa16.69■□□□□ 0.26
TRIM13-208ENST00000478111 BOLA3Q53S33 107 aa16.69■□□□□ 0.26
TRIM13-208ENST00000478111 CCDC183Q5T5S1 534 aa16.69■□□□□ 0.26
TRIM13-208ENST00000478111 DENND2CQ68D51 928 aa16.69■□□□□ 0.26
TRIM13-208ENST00000478111 Q6ZVL8 140 aa16.69■□□□□ 0.26
TRIM13-208ENST00000478111 TECPR1Q7Z6L1 1165 aa16.69■□□□□ 0.26
TRIM13-208ENST00000478111 TSPAN33Q86UF1 283 aa16.69■□□□□ 0.26
TRIM13-208ENST00000478111 ZFAND4Q86XD8 727 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms