RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 PRCCQ92733 491 aaPredicted RBP3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 DPF2Q92785 391 aa3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 HOXB13Q92826 284 aaPredicted RBP3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 MR1Q95460 341 aa3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 GTF3C6Q969F1 213 aa3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 PHF21BQ96EK2 531 aa3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 KTI12Q96EK9 354 aaPredicted RBP3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 SAAL1Q96ER3 474 aa3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 MVB12AQ96EY5 273 aa3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 PGM2Q96G03 612 aa3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 IFT74Q96LB3 600 aa3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 ALS2CR12Q96Q35 445 aa3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 GPR20Q99678 358 aa3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 CPPED1Q9BRF8 314 aaPredicted RBP3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 MTG1Q9BT17 334 aaPredicted RBP3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 CINPQ9BW66 212 aaPredicted RBP3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 SF3B5Q9BWJ5 86 aaKnown RBP3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 CARD6Q9BX69 1037 aa3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 SHCBP1LQ9BZQ2 653 aa3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 NDST4Q9H3R1 872 aa3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 RNPEPQ9H4A4 650 aa3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 OBP2BQ9NPH6 170 aa3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 C8orf4Q9NR00 106 aa3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 BATF3Q9NR55 127 aa3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 AGPAT3Q9NRZ7 376 aa3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 AGPAT5Q9NUQ2 364 aa3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 ZNF446Q9NWS9 450 aa3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 AURKAIP1Q9NWT8 199 aaPredicted RBP3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 CYP39A1Q9NYL5 469 aa3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 MARCH4Q9P2E8 410 aaPredicted RBP3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 LARSQ9P2J5 1176 aaKnown RBP3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 UXTQ9UBK9 157 aaPredicted RBP3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 CIDEBQ9UHD4 219 aa3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 TUBD1Q9UJT1 453 aa3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 FEM1BQ9UK73 627 aa3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 GPATCH8Q9UKJ3 1502 aaKnown RBP3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 VANGL2Q9ULK5 521 aa3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 PCDHA7Q9UN72 937 aa3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 NUDCQ9Y266 331 aa3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 RPH3AQ9Y2J0 694 aaPredicted RBP3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 MRPS2Q9Y399 296 aaKnown RBP3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 PPIL1Q9Y3C6 166 aa3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 PCDHGA5Q9Y5G8 931 aa3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 CLCA3PQ9Y6N3 262 aa3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 FAM169AQ9Y6X4 670 aa3.57□□□□□ -1.84
FNDC3B-209ENST00000478016 POLR1AO95602 1720 aaPredicted RBP3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 CAMSAP2Q08AD1 1489 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 NCOA1Q15788 1441 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 CEP162Q5TB80 1403 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 SALL3Q9BXA9 1300 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 A0A0U1RQV5 110 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 KRTAP23-1A1A580 65 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 FRMD3A2A2Y4 597 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 HTR3EA5X5Y0 456 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 IQCF5A8MTL0 148 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 LGALS16A8MUM7 142 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 B5MCH6 92 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 DNM1LO00429 736 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 CLDN3O15551 220 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 TRAPPC3O43617 180 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 KRT86O43790 486 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 RHBDL1O75783 438 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 KRT36O76013 467 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 RNF8O76064 485 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 SEC31AO94979 1220 aaKnown RBP3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 PTBP3O95758 552 aaKnown RBP3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 TUBB4AP04350 444 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 HMOX1P09601 288 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 ZCCHC18P0CG32 403 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 STAG3L3P0CL85 134 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 CHN1P15882 459 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 CKMT2P17540 419 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 M6PRP20645 277 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 ACRV1P26436 265 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 RRM2P31350 389 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 PTPN7P35236 360 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 SREBF1P36956 1147 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 CDKN1BP46527 198 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 CCT3P49368 545 aaKnown RBP3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 FLT3LGP49771 235 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 GATMP50440 423 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 SERPINB8P50452 374 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 CCT4P50991 539 aaKnown RBP3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 ANXA11P50995 505 aaKnown RBP3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 PMP22Q01453 160 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 KIF23Q02241 960 aaPredicted RBP3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 CREMQ03060 361 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 LIPEQ05469 1076 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 LGALS3BPQ08380 585 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 CSTF3Q12996 717 aaKnown RBP3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 GPS1Q13098 491 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 CRHR2Q13324 411 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 MAB21L1Q13394 359 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 XRCC4Q13426 336 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 THOC5Q13769 683 aaKnown RBP3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 E2F2Q14209 437 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 DMC1Q14565 340 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 DLGAP5Q15398 846 aa3.56□□□□□ -1.84
FNDC3B-209ENST00000478016 ZRSR1Q15695 479 aaKnown RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms