RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 TMEM174Q8WUU8 243 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 SEMA4DQ92854 862 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 IGSF8Q969P0 613 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 DUSP16Q9BY84 665 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 CIPCQ9C0C6 399 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 LHX5Q9H2C1 402 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 PNPLA8Q9NP80 782 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 CLIC5Q9NZA1 410 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 Q9UFV3 132 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 RASAL2Q9UJF2 1139 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.75□□□□□ -1.65
CKS1B-207ENST00000477676 RP1L1Q8IWN7 2480 aaPredicted RBP4.75□□□□□ -1.65
CKS1B-207ENST00000477676 LRP4O75096 1905 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 UNC79Q9P2D8 2635 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 LRBAP50851 2863 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 CELSR2Q9HCU4 2923 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 ICE1Q9Y2F5 2266 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 GOLGA6L7A0A1B0GV03 622 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 A0A1W2PNU3 283 aaPredicted RBP4.74□□□□□ -1.65
CKS1B-207ENST00000477676 SLC12A8A0AV02 714 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 NPC1O15118 1278 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 VILLO15195 856 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 CASC3O15234 703 aaKnown RBP4.74□□□□□ -1.65
CKS1B-207ENST00000477676 SPTLC2O15270 562 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 MSI1O43347 362 aaKnown RBP4.74□□□□□ -1.65
CKS1B-207ENST00000477676 BRINP1O60477 761 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 SYNCRIPO60506 623 aaKnown RBP4.74□□□□□ -1.65
CKS1B-207ENST00000477676 RAMP2O60895 175 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 FSBPO95073 299 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 NR3C1P04150 777 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 KRT10P13645 584 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 CD58P19256 250 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 CD27P26842 260 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 SLC6A4P31645 630 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 MSX2P35548 267 aaPredicted RBP4.74□□□□□ -1.65
CKS1B-207ENST00000477676 CHKAP35790 457 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 ADCY8P40145 1251 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 GCLMP48507 274 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 CCT8P50990 548 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 RAD23BP54727 409 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 GALCP54803 685 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 COG7P83436 770 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 TLE3Q04726 772 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 SGSM1Q2NKQ1 1148 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 FNDC3BQ53EP0 1204 aaKnown RBP4.74□□□□□ -1.65
CKS1B-207ENST00000477676 FAM133BQ5BKY9 247 aaKnown RBP4.74□□□□□ -1.65
CKS1B-207ENST00000477676 HES3Q5TGS1 186 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 SFMBT2Q5VUG0 894 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 PM20D1Q6GTS8 502 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 NADSYN1Q6IA69 706 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 RFWD3Q6PCD5 774 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 NCEH1Q6PIU2 408 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 SERPINA13PQ6UXR4 307 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 MMS22LQ6ZRQ5 1243 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 STXBP4Q6ZWJ1 553 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 CHST9Q7L1S5 443 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 PIGZQ86VD9 579 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 TMPRSS12Q86WS5 348 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 ERICH1Q86X53 443 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 SPATS2Q86XZ4 545 aaKnown RBP4.74□□□□□ -1.65
CKS1B-207ENST00000477676 FMNL3Q8IVF7 1028 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 AADATQ8N5Z0 425 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 CELF2-AS1Q8N7Q2 184 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 DDI1Q8WTU0 396 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 SPATA9Q9BWV2 254 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 SLC2A11Q9BYW1 496 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 ULBP1Q9BZM6 244 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 DCLK3Q9C098 648 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 RSPH9Q9H1X1 276 aaPredicted RBP4.74□□□□□ -1.65
CKS1B-207ENST00000477676 NEUROG2Q9H2A3 272 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 ABCB8Q9NUT2 735 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 SFMBT1Q9UHJ3 866 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 STOML2Q9UJZ1 356 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 ZNF510Q9Y2H8 683 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 NOTCH2Q04721 2471 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 ANKRD36A6QL64 1941 aa4.74□□□□□ -1.65
CKS1B-207ENST00000477676 ZFC3H1O60293 1989 aaKnown RBP4.73□□□□□ -1.65
CKS1B-207ENST00000477676 TEP1Q99973 2627 aaKnown RBP4.73□□□□□ -1.65
CKS1B-207ENST00000477676 CACNA1DQ01668 2161 aa4.73□□□□□ -1.65
CKS1B-207ENST00000477676 TRBV23-1A0A0A0MS06 115 aa4.73□□□□□ -1.65
CKS1B-207ENST00000477676 PVALEFA0A1B0GWK0 134 aa4.73□□□□□ -1.65
CKS1B-207ENST00000477676 A0A1W2PPC4 97 aa4.73□□□□□ -1.65
CKS1B-207ENST00000477676 BLACEA4D250 179 aa4.73□□□□□ -1.65
CKS1B-207ENST00000477676 FAM90A27PA6NNH2 459 aa4.73□□□□□ -1.65
CKS1B-207ENST00000477676 YJEFN3A6XGL0 299 aa4.73□□□□□ -1.65
CKS1B-207ENST00000477676 CAPN14A8MX76 684 aa4.73□□□□□ -1.65
CKS1B-207ENST00000477676 E7ENQ6 273 aa4.73□□□□□ -1.65
CKS1B-207ENST00000477676 E9PAM4 449 aa4.73□□□□□ -1.65
CKS1B-207ENST00000477676 RNF103O00237 685 aa4.73□□□□□ -1.65
CKS1B-207ENST00000477676 TRIM38O00635 465 aa4.73□□□□□ -1.65
CKS1B-207ENST00000477676 IKBKBO14920 756 aa4.73□□□□□ -1.65
CKS1B-207ENST00000477676 MID1O15344 667 aa4.73□□□□□ -1.65
CKS1B-207ENST00000477676 TIMM44O43615 452 aa4.73□□□□□ -1.65
CKS1B-207ENST00000477676 STX6O43752 255 aa4.73□□□□□ -1.65
CKS1B-207ENST00000477676 PPP6R2O75170 966 aa4.73□□□□□ -1.65
CKS1B-207ENST00000477676 RFPL3O75679 317 aa4.73□□□□□ -1.65
CKS1B-207ENST00000477676 KIF20AO95235 890 aa4.73□□□□□ -1.65
CKS1B-207ENST00000477676 PEX11BO96011 259 aa4.73□□□□□ -1.65
CKS1B-207ENST00000477676 CALCAP01258 141 aa4.73□□□□□ -1.65
CKS1B-207ENST00000477676 IGLV3-27P01718 113 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms