RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	SLC18A3	Q16572	532 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	SLC5A9	Q2M3M2	681 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	FAM214A	Q32MH5	1076 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ITPRIPL2	Q3MIP1	535 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	FAM78A	Q5JUQ0	283 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	BRMS1L	Q5PSV4	323 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	RABGAP1L	Q5R372	815 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	SCYL2	Q6P3W7	929 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	FAM183BP	Q6ZVS7	135 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	SLC26A9	Q7LBE3	791 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ARC	Q7LC44	396 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	GPRIN1	Q7Z2K8	1008 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ZNF571	Q7Z3V5	609 aa	Predicted RBP	4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	XYLT1	Q86Y38	959 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PHYKPL	Q8IUZ5	450 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	RHOT2	Q8IXI1	618 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	DEFB106A	Q8N104	65 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PPP1R14C	Q8TAE6	165 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	DNASE1L2	Q92874	299 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ARL8A	Q96BM9	186 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	TRIM44	Q96DX7	344 aa	Predicted RBP	4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	TCEAL4	Q96EI5	215 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MYADM	Q96S97	322 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CYP2S1	Q96SQ9	504 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	KXD1	Q9BQD3	176 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MLST8	Q9BVC4	326 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	SLC46A2	Q9BY10	475 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	OSBPL6	Q9BZF3	934 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	TSGA10	Q9BZW7	698 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ENKD1	Q9H0I2	346 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	WDCP	Q9H6R7	721 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	C8orf33	Q9H7E9	229 aa	Predicted RBP	4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ZMAT4	Q9H898	229 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	TRPV4	Q9HBA0	871 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ACP6	Q9NPH0	428 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	DDIT4	Q9NX09	232 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	COX16	Q9P0S2	106 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CFAP97	Q9P2B7	532 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	UVRAG	Q9P2Y5	699 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	IP6K2	Q9UHH9	426 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	INTU	Q9ULD6	942 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	NUMBL	Q9Y6R0	609 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PLXNA3	P51805	1871 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MYO7A	Q13402	2215 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289		A0A087X0T9	212 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	TMEM191C	A6NGB0	347 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	EIF3CL	B5ME19	914 aa	Known RBP	4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	LOC730098	B7Z3J9	87 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289		F5H5T6	163 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	IRAK2	O43187	625 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PAPSS1	O43252	624 aa	Predicted RBP	4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ZSCAN12	O43309	604 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	DCX	O43602	365 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	KRT86	O43790	486 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PRPSAP2	O60256	369 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	IPO13	O94829	963 aa	Known RBP	4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	APOL3	O95236	402 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	NDUFA10	O95299	355 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MOCS2	O96007	188 aa	Predicted RBP	4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ZDHHC11B	P0C7U3	371 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	FAM228B	P0C875	321 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	GAA	P10253	952 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	GLUL	P15104	373 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	FBL	P22087	321 aa	Known RBP	4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ZFP36	P26651	326 aa	Known RBP	4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CORO1A	P31146	461 aa	Known RBP	4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	RDX	P35241	583 aa	Known RBP	4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	VIPR2	P41587	438 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CCR2	P41597	374 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PTPN9	P43378	593 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	RPL34	P49207	117 aa	Known RBP	4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PTTG1IP	P53801	180 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	AIF1	P55008	147 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	GFPT1	Q06210	699 aa	Predicted RBP	4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	GRSF1	Q12849	480 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	TBX2	Q13207	712 aa	Predicted RBP	4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	RUNX3	Q13761	415 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CDO1	Q16878	200 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ANO4	Q32M45	955 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	SLC25A52	Q3SY17	297 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PTPN20	Q4JDL3	420 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MPPE1	Q53F39	396 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	STXBP5	Q5T5C0	1151 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MBNL2	Q5VZF2	373 aa	Known RBP	4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	TANGO2	Q6ICL3	276 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MSANTD2	Q6P1R3	559 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PARM1	Q6UWI2	310 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	OLFML1	Q6UWY5	402 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MON1B	Q7L1V2	547 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	STRADA	Q7RTN6	431 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	SCD5	Q86SK9	330 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CXorf67	Q86X51	503 aa	Predicted RBP	4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CHSY1	Q86X52	802 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	DENND1C	Q8IV53	801 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	VRK3	Q8IV63	474 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MAP7D3	Q8IWC1	876 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	SUGP1	Q8IWZ8	645 aa	Known RBP	4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	SYCE1	Q8N0S2	351 aa		4.63	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	SLC44A3	Q8N4M1	653 aa		4.63	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms