RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 DLX3O60479 287 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 KPNA6O60684 536 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 CNTN5O94779 1100 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 OAS1P00973 400 aaKnown RBP5□□□□□ -1.61
CCDC39-204ENST00000476379 S100BP04271 92 aaPredicted RBP5□□□□□ -1.61
CCDC39-204ENST00000476379 GNAO1P09471 354 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 POU2F1P14859 743 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 MUTP22033 750 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 KCNA5P22460 613 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 GRK2P25098 689 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 AGTR2P50052 363 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 DIO3P55073 304 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 HSPA14Q0VDF9 509 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 SPIDRQ14159 915 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 POLD3Q15054 466 aaPredicted RBP5□□□□□ -1.61
CCDC39-204ENST00000476379 SKIV2LQ15477 1246 aaKnown RBP5□□□□□ -1.61
CCDC39-204ENST00000476379 PTPRNQ16849 979 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 C18orf21Q32NC0 220 aaPredicted RBP5□□□□□ -1.61
CCDC39-204ENST00000476379 LRRC38Q5VT99 294 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 LCLAT1Q6UWP7 414 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 FAM126BQ8IXS8 530 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 LGI2Q8N0V4 545 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 THEM5Q8N1Q8 247 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 TTC9BQ8N6N2 239 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 ZNF366Q8N895 744 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 DNERQ8NFT8 737 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 METTL6Q8TCB7 284 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 SNX19Q92543 992 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 TSSK3Q96PN8 268 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 PLEKHG4BQ96PX9 1271 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 CPNE1Q99829 537 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 KCTD14Q9BQ13 255 aaPredicted RBP5□□□□□ -1.61
CCDC39-204ENST00000476379 ACAT2Q9BWD1 397 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 HIPK3Q9H422 1215 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 RIBC2Q9H4K1 309 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 TLR8Q9NR97 1041 aaKnown RBP5□□□□□ -1.61
CCDC39-204ENST00000476379 KLQ9UEF7 1012 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 CD84Q9UIB8 345 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 ITGA11Q9UKX5 1188 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 COPG1Q9Y678 874 aaKnown RBP5□□□□□ -1.61
CCDC39-204ENST00000476379 A0A0J9YYE9 177 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 STX7O15400 261 aaKnown RBP4.99□□□□□ -1.61
CCDC39-204ENST00000476379 C22orf31O95567 290 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 ITGB1P05556 798 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 CYBAP13498 195 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 PSMA4P25789 261 aaKnown RBP4.99□□□□□ -1.61
CCDC39-204ENST00000476379 ARRB2P32121 409 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 CRHR1P34998 444 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 PPARGP37231 505 aaPredicted RBP4.99□□□□□ -1.61
CCDC39-204ENST00000476379 NPY2RP49146 381 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 PSEN1P49768 467 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 KPNA1P52294 538 aaPredicted RBP4.99□□□□□ -1.61
CCDC39-204ENST00000476379 HADHBP55084 474 aaKnown RBP4.99□□□□□ -1.61
CCDC39-204ENST00000476379 INHBEP58166 350 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 SNRPFP62306 86 aaKnown RBP4.99□□□□□ -1.61
CCDC39-204ENST00000476379 HMGCS1Q01581 520 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 PRKAA1Q13131 559 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 CEACAM7Q14002 265 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 CCNIQ14094 377 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 NIPA1Q7RTP0 329 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 HS3ST5Q8IZT8 346 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 ZNF513Q8N8E2 541 aaPredicted RBP4.99□□□□□ -1.61
CCDC39-204ENST00000476379 OR52J3Q8NH60 311 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 HTRA1Q92743 480 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 PTCD3Q96EY7 689 aaKnown RBP4.99□□□□□ -1.61
CCDC39-204ENST00000476379 NOL6Q9H6R4 1146 aaKnown RBP4.99□□□□□ -1.61
CCDC39-204ENST00000476379 NDUFAF1Q9Y375 327 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 DNMT3AQ9Y6K1 912 aaPredicted RBP4.99□□□□□ -1.61
CCDC39-204ENST00000476379 A0A1W2PPW3 197 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 RGSL1A5PLK6 1076 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 MGEA5O60502 916 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 FKBP6O75344 327 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 RNASEH2AO75792 299 aaKnown RBP4.99□□□□□ -1.61
CCDC39-204ENST00000476379 CYP7B1O75881 506 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 ESRRBO95718 433 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 ALDH1A1P00352 501 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 GJA1P17302 382 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 GNAZP19086 355 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 IL4RP24394 825 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 WASHC5Q12768 1159 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 TSNQ15631 228 aaKnown RBP4.99□□□□□ -1.61
CCDC39-204ENST00000476379 MARCH8Q5T0T0 291 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 AGAP9Q5VTM2 703 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 MBLAC2Q68D91 279 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 FBXL19Q6PCT2 694 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 FAM151BQ6UXP7 276 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 DENND1CQ8IV53 801 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 CCDC117Q8IWD4 279 aaPredicted RBP4.99□□□□□ -1.61
CCDC39-204ENST00000476379 ARRDC4Q8NCT1 418 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 GPR156Q8NFN8 814 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 UTP15Q8TED0 518 aaKnown RBP4.99□□□□□ -1.61
CCDC39-204ENST00000476379 C6orf62Q9GZU0 229 aaPredicted RBP4.99□□□□□ -1.61
CCDC39-204ENST00000476379 KLHL25Q9H0H3 589 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 TPK1Q9H3S4 243 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 IGFLR1Q9H665 355 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 ASB7Q9H672 318 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 TMEM134Q9H6X4 195 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 ENTPD7Q9NQZ7 604 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 TLR9Q9NR96 1032 aa4.99□□□□□ -1.61
CCDC39-204ENST00000476379 CTPS2Q9NRF8 586 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms