RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 B4GALNT2Q8NHY0 566 aa5.03□□□□□ -1.6
PTCD3-211ENST00000476215 USP6NLQ92738 828 aa5.03□□□□□ -1.6
PTCD3-211ENST00000476215 MIB2Q96AX9 1013 aa5.03□□□□□ -1.6
PTCD3-211ENST00000476215 TIGD1Q96MW7 591 aa5.03□□□□□ -1.6
PTCD3-211ENST00000476215 BARD1Q99728 777 aaKnown RBP5.03□□□□□ -1.6
PTCD3-211ENST00000476215 MMTAG2Q9BU76 263 aaKnown RBP5.03□□□□□ -1.6
PTCD3-211ENST00000476215 C1QTNF5Q9BXJ0 243 aa5.03□□□□□ -1.6
PTCD3-211ENST00000476215 IFIH1Q9BYX4 1025 aaKnown RBP5.03□□□□□ -1.6
PTCD3-211ENST00000476215 NDST4Q9H3R1 872 aa5.03□□□□□ -1.6
PTCD3-211ENST00000476215 MKKSQ9NPJ1 570 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-211ENST00000476215 HINT3Q9NQE9 182 aaKnown RBP5.03□□□□□ -1.6
PTCD3-211ENST00000476215 RRP7BPQ9NSQ0 103 aa5.03□□□□□ -1.6
PTCD3-211ENST00000476215 SEPT11Q9NVA2 429 aaKnown RBP5.03□□□□□ -1.6
PTCD3-211ENST00000476215 CNOT8Q9UFF9 292 aaKnown RBP5.03□□□□□ -1.6
PTCD3-211ENST00000476215 AGO1Q9UL18 857 aaKnown RBP5.03□□□□□ -1.6
PTCD3-211ENST00000476215 KCNJ13O60928 360 aa5.02□□□□□ -1.61
PTCD3-211ENST00000476215 GLUD1P00367 558 aa5.02□□□□□ -1.61
PTCD3-211ENST00000476215 PRSS2P07478 247 aa5.02□□□□□ -1.61
PTCD3-211ENST00000476215 ACAA1P09110 424 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-211ENST00000476215 RARGP13631 454 aa5.02□□□□□ -1.61
PTCD3-211ENST00000476215 HNRNPH1P31943 449 aaKnown RBP5.02□□□□□ -1.61
PTCD3-211ENST00000476215 CCKBRP32239 447 aa5.02□□□□□ -1.61
PTCD3-211ENST00000476215 GLUD2P49448 558 aa5.02□□□□□ -1.61
PTCD3-211ENST00000476215 THBS3P49746 956 aa5.02□□□□□ -1.61
PTCD3-211ENST00000476215 COMPP49747 757 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-211ENST00000476215 EIF5P55010 431 aaKnown RBP5.02□□□□□ -1.61
PTCD3-211ENST00000476215 EFNB3Q15768 340 aa5.02□□□□□ -1.61
PTCD3-211ENST00000476215 ARHGAP12Q8IWW6 846 aa5.02□□□□□ -1.61
PTCD3-211ENST00000476215 DSELQ8IZU8 1212 aa5.02□□□□□ -1.61
PTCD3-211ENST00000476215 TMEM68Q96MH6 324 aa5.02□□□□□ -1.61
PTCD3-211ENST00000476215 FTOQ9C0B1 505 aaKnown RBP eCLIP5.02□□□□□ -1.61
PTCD3-211ENST00000476215 ESRP2Q9H6T0 727 aaKnown RBP5.02□□□□□ -1.61
PTCD3-211ENST00000476215 SLC28A3Q9HAS3 691 aa5.02□□□□□ -1.61
PTCD3-211ENST00000476215 RANGRFQ9HD47 186 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-211ENST00000476215 TBC1D22BQ9NU19 505 aa5.02□□□□□ -1.61
PTCD3-211ENST00000476215 HCFC1R1Q9NWW0 138 aa5.02□□□□□ -1.61
PTCD3-211ENST00000476215 LYVE1Q9Y5Y7 322 aa5.02□□□□□ -1.61
PTCD3-211ENST00000476215 hDV102S1A0JD36 115 aa5.01□□□□□ -1.61
PTCD3-211ENST00000476215 FSD2A1L4K1 749 aa5.01□□□□□ -1.61
PTCD3-211ENST00000476215 FAM90A8PA6NJQ4 464 aa5.01□□□□□ -1.61
PTCD3-211ENST00000476215 AP3D1O14617 1153 aa5.01□□□□□ -1.61
PTCD3-211ENST00000476215 PTP4A3O75365 173 aa5.01□□□□□ -1.61
PTCD3-211ENST00000476215 SLC25A12O75746 678 aa5.01□□□□□ -1.61
PTCD3-211ENST00000476215 FAM90A13PP0C7W8 464 aa5.01□□□□□ -1.61
PTCD3-211ENST00000476215 FAM90A24PP0C7X0 464 aa5.01□□□□□ -1.61
PTCD3-211ENST00000476215 ITGB8P26012 769 aa5.01□□□□□ -1.61
PTCD3-211ENST00000476215 CCKARP32238 428 aa5.01□□□□□ -1.61
PTCD3-211ENST00000476215 STX2P32856 288 aa5.01□□□□□ -1.61
PTCD3-211ENST00000476215 CASP2P42575 452 aa5.01□□□□□ -1.61
PTCD3-211ENST00000476215 METAP2P50579 478 aaKnown RBP eCLIP5.01□□□□□ -1.61
PTCD3-211ENST00000476215 NAP1L1P55209 391 aaKnown RBP5.01□□□□□ -1.61
PTCD3-211ENST00000476215 NIPAL4Q0D2K0 466 aa5.01□□□□□ -1.61
PTCD3-211ENST00000476215 TRAF2Q12933 501 aa5.01□□□□□ -1.61
PTCD3-211ENST00000476215 HLFQ16534 295 aa5.01□□□□□ -1.61
PTCD3-211ENST00000476215 EIF2S3LQ2VIR3 472 aaKnown RBP5.01□□□□□ -1.61
PTCD3-211ENST00000476215 PPP6R3Q5H9R7 873 aaPredicted RBP5.01□□□□□ -1.61
PTCD3-211ENST00000476215 EFHC1Q5JVL4 640 aa5.01□□□□□ -1.61
PTCD3-211ENST00000476215 WDR78Q5VTH9 848 aa5.01□□□□□ -1.61
PTCD3-211ENST00000476215 ITPRIPL1Q6GPH6 555 aa5.01□□□□□ -1.61
PTCD3-211ENST00000476215 METTL2BQ6P1Q9 378 aaKnown RBP5.01□□□□□ -1.61
PTCD3-211ENST00000476215 SPATA6LQ8N4H0 392 aa5.01□□□□□ -1.61
PTCD3-211ENST00000476215 FAM216AQ8WUB2 273 aa5.01□□□□□ -1.61
PTCD3-211ENST00000476215 POMGNT1Q8WZA1 660 aa5.01□□□□□ -1.61
PTCD3-211ENST00000476215 WASF1Q92558 559 aa5.01□□□□□ -1.61
PTCD3-211ENST00000476215 ARHGEF26Q96DR7 871 aa5.01□□□□□ -1.61
PTCD3-211ENST00000476215 METTL2AQ96IZ6 378 aaKnown RBP5.01□□□□□ -1.61
PTCD3-211ENST00000476215 HARBI1Q96MB7 349 aa5.01□□□□□ -1.61
PTCD3-211ENST00000476215 KXD1Q9BQD3 176 aa5.01□□□□□ -1.61
PTCD3-211ENST00000476215 TMEM204Q9BSN7 226 aa5.01□□□□□ -1.61
PTCD3-211ENST00000476215 HAUS8Q9BT25 410 aa5.01□□□□□ -1.61
PTCD3-211ENST00000476215 SEZ6LQ9BYH1 1024 aa5.01□□□□□ -1.61
PTCD3-211ENST00000476215 KAT14Q9H8E8 782 aa5.01□□□□□ -1.61
PTCD3-211ENST00000476215 CNGB3Q9NQW8 809 aa5.01□□□□□ -1.61
PTCD3-211ENST00000476215 SLC9A2Q9UBY0 812 aa5.01□□□□□ -1.61
PTCD3-211ENST00000476215 MYO1GB0I1T2 1018 aa5□□□□□ -1.61
PTCD3-211ENST00000476215 VCYO14598 125 aa5□□□□□ -1.61
PTCD3-211ENST00000476215 DOK2O60496 412 aa5□□□□□ -1.61
PTCD3-211ENST00000476215 CDH2P19022 906 aaPredicted RBP5□□□□□ -1.61
PTCD3-211ENST00000476215 MAOAP21397 527 aa5□□□□□ -1.61
PTCD3-211ENST00000476215 NANOS2P60321 138 aaKnown RBP5□□□□□ -1.61
PTCD3-211ENST00000476215 KRT24Q2M2I5 525 aa5□□□□□ -1.61
PTCD3-211ENST00000476215 GGNBP1Q5YKI7 109 aa5□□□□□ -1.61
PTCD3-211ENST00000476215 PLEKHA7Q6IQ23 1121 aa5□□□□□ -1.61
PTCD3-211ENST00000476215 MZT2BQ6NZ67 158 aa5□□□□□ -1.61
PTCD3-211ENST00000476215 KLHL35Q6PF15 583 aa5□□□□□ -1.61
PTCD3-211ENST00000476215 PQLC2Q6ZP29 291 aa5□□□□□ -1.61
PTCD3-211ENST00000476215 WDTC1Q8N5D0 677 aa5□□□□□ -1.61
PTCD3-211ENST00000476215 IQCF1Q8N6M8 205 aa5□□□□□ -1.61
PTCD3-211ENST00000476215 OR14L1PQ8NHC6 308 aa5□□□□□ -1.61
PTCD3-211ENST00000476215 ELP5Q8TE02 316 aa5□□□□□ -1.61
PTCD3-211ENST00000476215 CREB3L4Q8TEY5 395 aa5□□□□□ -1.61
PTCD3-211ENST00000476215 SCFD2Q8WU76 684 aa5□□□□□ -1.61
PTCD3-211ENST00000476215 TMED6Q8WW62 240 aa5□□□□□ -1.61
PTCD3-211ENST00000476215 NEUROG1Q92886 237 aa5□□□□□ -1.61
PTCD3-211ENST00000476215 ZKSCAN4Q969J2 545 aaPredicted RBP5□□□□□ -1.61
PTCD3-211ENST00000476215 LYZL4Q96KX0 146 aa5□□□□□ -1.61
PTCD3-211ENST00000476215 C1orf74Q96LT6 269 aa5□□□□□ -1.61
PTCD3-211ENST00000476215 CMTM3Q96MX0 182 aa5□□□□□ -1.61
PTCD3-211ENST00000476215 TREX2Q9BQ50 279 aaPredicted RBP5□□□□□ -1.61
PTCD3-211ENST00000476215 SDF4Q9BRK5 362 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms