RNA–Protein interactions for RNA: ENST00000476098.5

BEST3-204, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 1,692 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-204ENST00000476098 SIPA1Q96FS4 1042 aa11.65□□□□□ -0.54
BEST3-204ENST00000476098 DNAJC1Q96KC8 554 aaKnown RBP11.65□□□□□ -0.54
BEST3-204ENST00000476098 UHRF1Q96T88 793 aaPredicted RBP11.65□□□□□ -0.54
BEST3-204ENST00000476098 NLE1Q9NVX2 485 aaPredicted RBP11.65□□□□□ -0.54
BEST3-204ENST00000476098 IL17CQ9P0M4 197 aa11.65□□□□□ -0.54
BEST3-204ENST00000476098 RABGEF1Q9UJ41 708 aa11.65□□□□□ -0.54
BEST3-204ENST00000476098 SIT1Q9Y3P8 196 aa11.65□□□□□ -0.54
BEST3-204ENST00000476098 NFS1Q9Y697 457 aa11.65□□□□□ -0.54
BEST3-204ENST00000476098 ATG2BQ96BY7 2078 aa11.65□□□□□ -0.54
BEST3-204ENST00000476098 A0A087WUV0 522 aaPredicted RBP11.65□□□□□ -0.55
BEST3-204ENST00000476098 A0A1W2PP55 124 aa11.65□□□□□ -0.55
BEST3-204ENST00000476098 CCL22O00626 93 aa11.65□□□□□ -0.55
BEST3-204ENST00000476098 SLC4A1P02730 911 aa11.65□□□□□ -0.55
BEST3-204ENST00000476098 DNTTP04053 509 aa11.65□□□□□ -0.55
BEST3-204ENST00000476098 SHBGP04278 402 aa11.65□□□□□ -0.55
BEST3-204ENST00000476098 NUDT17P0C025 328 aa11.65□□□□□ -0.55
BEST3-204ENST00000476098 GABRG2P18507 467 aa11.65□□□□□ -0.55
BEST3-204ENST00000476098 NDUFV2P19404 249 aa11.65□□□□□ -0.55
BEST3-204ENST00000476098 NFKBIAP25963 317 aa11.65□□□□□ -0.55
BEST3-204ENST00000476098 PHBP35232 272 aa11.65□□□□□ -0.55
BEST3-204ENST00000476098 MMP12P39900 470 aa11.65□□□□□ -0.55
BEST3-204ENST00000476098 RPS9P46781 194 aaKnown RBP11.65□□□□□ -0.55
BEST3-204ENST00000476098 KIAA0930Q6ICG6 404 aaPredicted RBP11.65□□□□□ -0.55
BEST3-204ENST00000476098 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.65□□□□□ -0.55
BEST3-204ENST00000476098 RAB7BQ96AH8 199 aa11.65□□□□□ -0.55
BEST3-204ENST00000476098 CDKN2AIPNLQ96HQ2 116 aa11.65□□□□□ -0.55
BEST3-204ENST00000476098 TBATAQ96M53 351 aa11.65□□□□□ -0.55
BEST3-204ENST00000476098 CHRDQ9H2X0 955 aa11.65□□□□□ -0.55
BEST3-204ENST00000476098 SUDS3Q9H7L9 328 aaPredicted RBP11.65□□□□□ -0.55
BEST3-204ENST00000476098 BPIFA1Q9NP55 256 aa11.65□□□□□ -0.55
BEST3-204ENST00000476098 FBXL12Q9NXK8 326 aa11.65□□□□□ -0.55
BEST3-204ENST00000476098 IL1RAPL1Q9NZN1 696 aa11.65□□□□□ -0.55
BEST3-204ENST00000476098 GGT7Q9UJ14 662 aa11.65□□□□□ -0.55
BEST3-204ENST00000476098 SCML1Q9UN30 329 aa11.65□□□□□ -0.55
BEST3-204ENST00000476098 ITM2BQ9Y287 266 aa11.65□□□□□ -0.55
BEST3-204ENST00000476098 FADS3Q9Y5Q0 445 aa11.65□□□□□ -0.55
BEST3-204ENST00000476098 TTC28Q96AY4 2481 aa11.64□□□□□ -0.55
BEST3-204ENST00000476098 NCOR1O75376 2440 aa11.64□□□□□ -0.55
BEST3-204ENST00000476098 BDP1A6H8Y1 2624 aa11.64□□□□□ -0.55
BEST3-204ENST00000476098 MAP2K7O14733 419 aa11.64□□□□□ -0.55
BEST3-204ENST00000476098 STX7O15400 261 aaKnown RBP11.64□□□□□ -0.55
BEST3-204ENST00000476098 DCXO43602 365 aa11.64□□□□□ -0.55
BEST3-204ENST00000476098 RNASEH2AO75792 299 aaKnown RBP11.64□□□□□ -0.55
BEST3-204ENST00000476098 PIAS1O75925 651 aa11.64□□□□□ -0.55
BEST3-204ENST00000476098 SASH3O75995 380 aa11.64□□□□□ -0.55
BEST3-204ENST00000476098 VAPBO95292 243 aa11.64□□□□□ -0.55
BEST3-204ENST00000476098 PDGFBP01127 241 aaPredicted RBP11.64□□□□□ -0.55
BEST3-204ENST00000476098 DCNP07585 359 aaKnown RBP11.64□□□□□ -0.55
BEST3-204ENST00000476098 ERVK-10P10266 1014 aa11.64□□□□□ -0.55
BEST3-204ENST00000476098 ZNF30P17039 623 aa11.64□□□□□ -0.55
BEST3-204ENST00000476098 STX2P32856 288 aa11.64□□□□□ -0.55
BEST3-204ENST00000476098 STC1P52823 247 aa11.64□□□□□ -0.55
BEST3-204ENST00000476098 TAS2R38P59533 333 aa11.64□□□□□ -0.55
BEST3-204ENST00000476098 TMPRSS15P98073 1019 aa11.64□□□□□ -0.55
BEST3-204ENST00000476098 ELP6Q0PNE2 266 aa11.64□□□□□ -0.55
BEST3-204ENST00000476098 ARHGEF7Q14155 803 aa11.64□□□□□ -0.55
BEST3-204ENST00000476098 LONRF1Q17RB8 773 aa11.64□□□□□ -0.55
BEST3-204ENST00000476098 LIPIQ6XZB0 460 aa11.64□□□□□ -0.55
BEST3-204ENST00000476098 MICALCLQ6ZW33 695 aa11.64□□□□□ -0.55
BEST3-204ENST00000476098 OR2W6PQ8NHA6 318 aa11.64□□□□□ -0.55
BEST3-204ENST00000476098 HDAC10Q969S8 669 aa11.64□□□□□ -0.55
BEST3-204ENST00000476098 PBXIP1Q96AQ6 731 aa11.64□□□□□ -0.55
BEST3-204ENST00000476098 CERS2Q96G23 380 aa11.64□□□□□ -0.55
BEST3-204ENST00000476098 OMDQ99983 421 aa11.64□□□□□ -0.55
BEST3-204ENST00000476098 C19orf43Q9BQ61 176 aa11.64□□□□□ -0.55
BEST3-204ENST00000476098 ACSS3Q9H6R3 686 aa11.64□□□□□ -0.55
BEST3-204ENST00000476098 POLMQ9NP87 494 aaPredicted RBP11.64□□□□□ -0.55
BEST3-204ENST00000476098 SMYD2Q9NRG4 433 aa11.64□□□□□ -0.55
BEST3-204ENST00000476098 C20orf96Q9NUD7 363 aaPredicted RBP11.64□□□□□ -0.55
BEST3-204ENST00000476098 PLAAQ9Y263 795 aa11.64□□□□□ -0.55
BEST3-204ENST00000476098 PKP3Q9Y446 797 aa11.64□□□□□ -0.55
BEST3-204ENST00000476098 BPTFQ12830 3046 aa11.64□□□□□ -0.55
BEST3-204ENST00000476098 CKAP5Q14008 2032 aa11.63□□□□□ -0.55
BEST3-204ENST00000476098 FAM159BA6NKW6 160 aa11.63□□□□□ -0.55
BEST3-204ENST00000476098 CXorf49A8MYA2 514 aaPredicted RBP11.63□□□□□ -0.55
BEST3-204ENST00000476098 GOLGA8KD6RF30 607 aa11.63□□□□□ -0.55
BEST3-204ENST00000476098 H0Y858 1186 aa11.63□□□□□ -0.55
BEST3-204ENST00000476098 GOLGA8TH3BQL2 631 aa11.63□□□□□ -0.55
BEST3-204ENST00000476098 SLC7A4O43246 635 aa11.63□□□□□ -0.55
BEST3-204ENST00000476098 AP1G1O43747 822 aa11.63□□□□□ -0.55
BEST3-204ENST00000476098 RPP40O75818 363 aaKnown RBP11.63□□□□□ -0.55
BEST3-204ENST00000476098 C1SP09871 688 aa11.63□□□□□ -0.55
BEST3-204ENST00000476098 BPIP17213 487 aa11.63□□□□□ -0.55
BEST3-204ENST00000476098 PAMP19021 973 aa11.63□□□□□ -0.55
BEST3-204ENST00000476098 LIG3P49916 1009 aa11.63□□□□□ -0.55
BEST3-204ENST00000476098 CCDC15Q0P6D6 951 aa11.63□□□□□ -0.55
BEST3-204ENST00000476098 MTAPQ13126 283 aa11.63□□□□□ -0.55
BEST3-204ENST00000476098 SMAD1Q15797 465 aaKnown RBP11.63□□□□□ -0.55
BEST3-204ENST00000476098 KBTBD12Q3ZCT8 623 aa11.63□□□□□ -0.55
BEST3-204ENST00000476098 TMEM52BQ4KMG9 183 aa11.63□□□□□ -0.55
BEST3-204ENST00000476098 HSP90AA5PQ58FG0 334 aa11.63□□□□□ -0.55
BEST3-204ENST00000476098 ALS2CLQ60I27 953 aa11.63□□□□□ -0.55
BEST3-204ENST00000476098 CWF19L1Q69YN2 538 aaKnown RBP11.63□□□□□ -0.55
BEST3-204ENST00000476098 ZNF449Q6P9G9 518 aa11.63□□□□□ -0.55
BEST3-204ENST00000476098 RFLNAQ6ZTI6 216 aa11.63□□□□□ -0.55
BEST3-204ENST00000476098 USP30Q70CQ3 517 aa11.63□□□□□ -0.55
BEST3-204ENST00000476098 HSD11B1LQ7Z5J1 315 aa11.63□□□□□ -0.55
BEST3-204ENST00000476098 SPEM1Q8N4L4 309 aa11.63□□□□□ -0.55
BEST3-204ENST00000476098 GANCQ8TET4 914 aa11.63□□□□□ -0.55
BEST3-204ENST00000476098 HMGB4Q8WW32 186 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms