RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 JMJD4Q9H9V9 463 aa6.39□□□□□ -1.39
SMC5-203ENST00000475540 BRF2Q9HAW0 419 aa6.39□□□□□ -1.39
SMC5-203ENST00000475540 PREBQ9HCU5 417 aa6.39□□□□□ -1.39
SMC5-203ENST00000475540 UBN1Q9NPG3 1134 aa6.39□□□□□ -1.39
SMC5-203ENST00000475540 HINT3Q9NQE9 182 aaKnown RBP6.39□□□□□ -1.39
SMC5-203ENST00000475540 PGAP2Q9UHJ9 254 aa6.39□□□□□ -1.39
SMC5-203ENST00000475540 KCNG2Q9UJ96 466 aa6.39□□□□□ -1.39
SMC5-203ENST00000475540 HAO1Q9UJM8 370 aa6.39□□□□□ -1.39
SMC5-203ENST00000475540 NAALADL1Q9UQQ1 740 aa6.39□□□□□ -1.39
SMC5-203ENST00000475540 AAR2Q9Y312 384 aaKnown RBP6.39□□□□□ -1.39
SMC5-203ENST00000475540 IGHV4OR15-8A0A075B7B6 117 aa6.38□□□□□ -1.39
SMC5-203ENST00000475540 A0A1B0GVC2 190 aa6.38□□□□□ -1.39
SMC5-203ENST00000475540 AKR1B15C9JRZ8 316 aaPredicted RBP6.38□□□□□ -1.39
SMC5-203ENST00000475540 IFNL4K9M1U5 179 aa6.38□□□□□ -1.39
SMC5-203ENST00000475540 LDLRAD4O15165 306 aa6.38□□□□□ -1.39
SMC5-203ENST00000475540 MID1O15344 667 aa6.38□□□□□ -1.39
SMC5-203ENST00000475540 F7P08709 466 aaPredicted RBP6.38□□□□□ -1.39
SMC5-203ENST00000475540 LINC00271P0C7V0 271 aa6.38□□□□□ -1.39
SMC5-203ENST00000475540 MAOAP21397 527 aa6.38□□□□□ -1.39
SMC5-203ENST00000475540 RRM1P23921 792 aa6.38□□□□□ -1.39
SMC5-203ENST00000475540 CDAP32320 146 aa6.38□□□□□ -1.39
SMC5-203ENST00000475540 EIF2S3LQ2VIR3 472 aaKnown RBP6.38□□□□□ -1.39
SMC5-203ENST00000475540 HSP90AB4PQ58FF6 505 aa6.38□□□□□ -1.39
SMC5-203ENST00000475540 GGNBP1Q5YKI7 109 aa6.38□□□□□ -1.39
SMC5-203ENST00000475540 PLEKHA7Q6IQ23 1121 aa6.38□□□□□ -1.39
SMC5-203ENST00000475540 TUBA1AQ71U36 451 aa6.38□□□□□ -1.39
SMC5-203ENST00000475540 CUZD1Q86UP6 607 aa6.38□□□□□ -1.39
SMC5-203ENST00000475540 WDR63Q8IWG1 891 aa6.38□□□□□ -1.39
SMC5-203ENST00000475540 RFLNBQ8N5W9 214 aa6.38□□□□□ -1.39
SMC5-203ENST00000475540 POC1AQ8NBT0 407 aa6.38□□□□□ -1.39
SMC5-203ENST00000475540 DNASE2BQ8WZ79 361 aa6.38□□□□□ -1.39
SMC5-203ENST00000475540 FIG4Q92562 907 aa6.38□□□□□ -1.39
SMC5-203ENST00000475540 SLC41A2Q96JW4 573 aa6.38□□□□□ -1.39
SMC5-203ENST00000475540 TUBA1CQ9BQE3 449 aa6.38□□□□□ -1.39
SMC5-203ENST00000475540 VPS33BQ9H267 617 aa6.38□□□□□ -1.39
SMC5-203ENST00000475540 PDCL3Q9H2J4 239 aa6.38□□□□□ -1.39
SMC5-203ENST00000475540 PCDH9Q9HC56 1237 aa6.38□□□□□ -1.39
SMC5-203ENST00000475540 PCDHAC2Q9Y5I4 1007 aa6.38□□□□□ -1.39
SMC5-203ENST00000475540 CEPT1Q9Y6K0 416 aa6.38□□□□□ -1.39
SMC5-203ENST00000475540 A0A0G2JPF8 293 aa6.37□□□□□ -1.39
SMC5-203ENST00000475540 HNRNPCL3B7ZW38 293 aa6.37□□□□□ -1.39
SMC5-203ENST00000475540 TULP2O00295 520 aa6.37□□□□□ -1.39
SMC5-203ENST00000475540 HNRNPCL1O60812 293 aaKnown RBP6.37□□□□□ -1.39
SMC5-203ENST00000475540 ZNF432O94892 652 aa6.37□□□□□ -1.39
SMC5-203ENST00000475540 AGR2O95994 175 aa6.37□□□□□ -1.39
SMC5-203ENST00000475540 HNRNPCL4P0DMR1 293 aa6.37□□□□□ -1.39
SMC5-203ENST00000475540 DDIT3P35638 169 aa6.37□□□□□ -1.39
SMC5-203ENST00000475540 NLRP5P59047 1200 aa6.37□□□□□ -1.39
SMC5-203ENST00000475540 SEC61BP60468 96 aaKnown RBP6.37□□□□□ -1.39
SMC5-203ENST00000475540 DRAP1Q14919 205 aaPredicted RBP6.37□□□□□ -1.39
SMC5-203ENST00000475540 C9orf50Q5SZB4 431 aa6.37□□□□□ -1.39
SMC5-203ENST00000475540 HAPLN4Q86UW8 402 aa6.37□□□□□ -1.39
SMC5-203ENST00000475540 SFR1Q86XK3 245 aa6.37□□□□□ -1.39
SMC5-203ENST00000475540 NAGSQ8N159 534 aa6.37□□□□□ -1.39
SMC5-203ENST00000475540 KCNH5Q8NCM2 988 aa6.37□□□□□ -1.39
SMC5-203ENST00000475540 SPATA20Q8TB22 786 aa6.37□□□□□ -1.39
SMC5-203ENST00000475540 SORCS1Q8WY21 1168 aa6.37□□□□□ -1.39
SMC5-203ENST00000475540 TMEM19Q96HH6 336 aa6.37□□□□□ -1.39
SMC5-203ENST00000475540 NR1H4Q96RI1 486 aaPredicted RBP6.37□□□□□ -1.39
SMC5-203ENST00000475540 AGXT2Q9BYV1 514 aa6.37□□□□□ -1.39
SMC5-203ENST00000475540 IFIH1Q9BYX4 1025 aaKnown RBP6.37□□□□□ -1.39
SMC5-203ENST00000475540 ASAH2Q9NR71 780 aa6.37□□□□□ -1.39
SMC5-203ENST00000475540 PCDHB16Q9NRJ7 776 aa6.37□□□□□ -1.39
SMC5-203ENST00000475540 SLC6A13Q9NSD5 602 aa6.37□□□□□ -1.39
SMC5-203ENST00000475540 TAS2R10Q9NYW0 307 aa6.37□□□□□ -1.39
SMC5-203ENST00000475540 TINAGQ9UJW2 476 aa6.37□□□□□ -1.39
SMC5-203ENST00000475540 DOCK7Q96N67 2140 aa6.37□□□□□ -1.39
SMC5-203ENST00000475540 EIF3CLB5ME19 914 aaKnown RBP6.36□□□□□ -1.39
SMC5-203ENST00000475540 PRAC2D3DTV9 90 aa6.36□□□□□ -1.39
SMC5-203ENST00000475540 SNAP23O00161 211 aa6.36□□□□□ -1.39
SMC5-203ENST00000475540 UBL4AP11441 157 aa6.36□□□□□ -1.39
SMC5-203ENST00000475540 EPHA8P29322 1005 aaPredicted RBP6.36□□□□□ -1.39
SMC5-203ENST00000475540 FGFBP1Q14512 234 aa6.36□□□□□ -1.39
SMC5-203ENST00000475540 FAM76BQ5HYJ3 339 aa6.36□□□□□ -1.39
SMC5-203ENST00000475540 KCTD18Q6PI47 426 aaPredicted RBP6.36□□□□□ -1.39
SMC5-203ENST00000475540 Q6ZTC4 211 aa6.36□□□□□ -1.39
SMC5-203ENST00000475540 FOXRED2Q8IWF2 684 aa6.36□□□□□ -1.39
SMC5-203ENST00000475540 GTF3C6Q969F1 213 aa6.36□□□□□ -1.39
SMC5-203ENST00000475540 SEC62Q99442 399 aaKnown RBP6.36□□□□□ -1.39
SMC5-203ENST00000475540 PKP4Q99569 1192 aa6.36□□□□□ -1.39
SMC5-203ENST00000475540 KRTAP2-2Q9BYT5 123 aa6.36□□□□□ -1.39
SMC5-203ENST00000475540 KCNN2Q9H2S1 579 aa6.36□□□□□ -1.39
SMC5-203ENST00000475540 RANBP17Q9H2T7 1088 aaKnown RBP6.36□□□□□ -1.39
SMC5-203ENST00000475540 PPP1R3EQ9H7J1 279 aa6.36□□□□□ -1.39
SMC5-203ENST00000475540 EVA1AQ9H8M9 152 aa6.36□□□□□ -1.39
SMC5-203ENST00000475540 UBTD1Q9HAC8 227 aa6.36□□□□□ -1.39
SMC5-203ENST00000475540 MCM9Q9NXL9 1143 aa6.36□□□□□ -1.39
SMC5-203ENST00000475540 SCN5AQ14524 2016 aa6.35□□□□□ -1.39
SMC5-203ENST00000475540 NOTCH4Q99466 2003 aa6.35□□□□□ -1.39
SMC5-203ENST00000475540 KDM3AQ9Y4C1 1321 aa6.35□□□□□ -1.39
SMC5-203ENST00000475540 GOLGA6L9A6NEM1 432 aa6.35□□□□□ -1.39
SMC5-203ENST00000475540 CAMTA2O94983 1202 aa6.35□□□□□ -1.39
SMC5-203ENST00000475540 HARS2P49590 506 aaKnown RBP6.35□□□□□ -1.39
SMC5-203ENST00000475540 CLCNKAP51800 687 aa6.35□□□□□ -1.39
SMC5-203ENST00000475540 COL28A1Q2UY09 1125 aa6.35□□□□□ -1.39
SMC5-203ENST00000475540 USP41Q3LFD5 358 aa6.35□□□□□ -1.39
SMC5-203ENST00000475540 C6orf141Q5SZD1 244 aa6.35□□□□□ -1.39
SMC5-203ENST00000475540 INTS11Q5TA45 600 aaKnown RBP6.35□□□□□ -1.39
SMC5-203ENST00000475540 RGMBQ6NW40 437 aa6.35□□□□□ -1.39
SMC5-203ENST00000475540 CDC73Q6P1J9 531 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms